RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 FGFR1OP2Q9NVK5 253 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 EPN1Q9Y6I3 576 aaPredicted RBP7.24□□□□□ -1.25
TRIM38-201ENST00000357085 RASSF10A6NK89 507 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 STXBP3O00186 592 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 O00370 1275 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 PRR29P0C7W0 189 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 TMEM67Q5HYA8 995 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 RNF217Q8TC41 542 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 PGBD1Q96JS3 809 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 ATG3Q9NT62 314 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 AGBL2Q5U5Z8 902 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 KCTD16Q68DU8 428 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 IL1RAPL1Q9NZN1 696 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 SHOX2O60902 331 aaPredicted RBP7.24□□□□□ -1.25
TRIM38-201ENST00000357085 CIAO1O76071 339 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 RANBP1P43487 201 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 GOLGA8FQ08AF8 430 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 GOLGA8DPQ0D2H9 430 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 EIF4A2Q14240 407 aaKnown RBP7.24□□□□□ -1.25
TRIM38-201ENST00000357085 YIPF3Q9GZM5 350 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 TYW1Q9NV66 732 aaKnown RBP7.24□□□□□ -1.25
TRIM38-201ENST00000357085 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.24□□□□□ -1.25
TRIM38-201ENST00000357085 RPL13P26373 211 aaKnown RBP7.24□□□□□ -1.25
TRIM38-201ENST00000357085 WTAPQ15007 396 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 SOGA3Q5TF21 947 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 ZNF662Q6ZS27 426 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 GRAMD1AQ96CP6 724 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 AK8Q96MA6 479 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 PNKPQ96T60 521 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 TCHPQ9BT92 498 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 KDM4CQ9H3R0 1056 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 SLC40A1Q9NP59 571 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 TUBE1Q9UJT0 475 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 PHRF1Q9P1Y6 1649 aaKnown RBP7.24□□□□□ -1.25
TRIM38-201ENST00000357085 LARGE1O95461 756 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 IFIT1P09914 478 aaKnown RBP7.23□□□□□ -1.25
TRIM38-201ENST00000357085 SEL1L2Q5TEA6 688 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 CCDC13Q8IYE1 715 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 FMR1NBQ8N0W7 255 aaPredicted RBP7.23□□□□□ -1.25
TRIM38-201ENST00000357085 MMGT1Q8N4V1 131 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 THOC1Q96FV9 657 aaKnown RBP7.23□□□□□ -1.25
TRIM38-201ENST00000357085 HAUS7Q99871 368 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 COPRSQ9NQ92 184 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 LRRC37A3O60309 1634 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 PALLDQ8WX93 1383 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 ITIH4Q14624 930 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 NECTIN1Q15223 517 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 CCDC97Q96F63 343 aaPredicted RBP7.23□□□□□ -1.25
TRIM38-201ENST00000357085 SGSM3Q96HU1 749 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.23□□□□□ -1.25
TRIM38-201ENST00000357085 PRLRP16471 622 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 RFX1P22670 979 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 VPS37DQ86XT2 251 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 GRK7Q8WTQ7 553 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 HVCN1Q96D96 273 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 LRRC2Q9BYS8 371 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 GOLPH3LQ9H4A5 285 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 CTNND2Q9UQB3 1225 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 POTEFA5A3E0 1075 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 PFDN1O60925 122 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 DCTN3O75935 186 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 VIMP08670 466 aaKnown RBP7.23□□□□□ -1.25
TRIM38-201ENST00000357085 POTEIP0CG38 1075 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 ZFXP17010 805 aaPredicted RBP7.23□□□□□ -1.25
TRIM38-201ENST00000357085 CAV1Q03135 178 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 TAF11Q15544 211 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 POTEEQ6S8J3 1075 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 CUL5Q93034 780 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 OSBPL1AQ9BXW6 950 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 MIS18AQ9NYP9 233 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 STOML1Q9UBI4 398 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 IKBKGQ9Y6K9 419 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 DIP2CQ9Y2E4 1556 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 ATP1A3P13637 1013 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 PDE4BQ07343 736 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 ADCK5Q3MIX3 580 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 TDRD12Q587J7 1177 aaKnown RBP7.23□□□□□ -1.25
TRIM38-201ENST00000357085 CDC5LQ99459 802 aaKnown RBP7.23□□□□□ -1.25
TRIM38-201ENST00000357085 TANGO6Q9C0B7 1094 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 RGS16O15492 202 aaPredicted RBP7.23□□□□□ -1.25
TRIM38-201ENST00000357085 FERP16591 822 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 CCT6AP40227 531 aaKnown RBP7.23□□□□□ -1.25
TRIM38-201ENST00000357085 DNA2P51530 1060 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 AKAP4Q5JQC9 854 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 REXO1L1PQ8IX06 675 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 ANGPTL2Q9UKU9 493 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 USP6P35125 1406 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 PGRMC1O00264 195 aaKnown RBP7.23□□□□□ -1.25
TRIM38-201ENST00000357085 GNA11P29992 359 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 KRT9P35527 623 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 LONP1P36776 959 aaKnown RBP7.23□□□□□ -1.25
TRIM38-201ENST00000357085 PTH1RQ03431 593 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 MORC3Q14149 939 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 LONRF3Q496Y0 759 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 NSUN7Q8NE18 718 aaKnown RBP7.23□□□□□ -1.25
TRIM38-201ENST00000357085 SLITRK6Q9H5Y7 841 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 PNMA6EA0A0J9YXQ4 647 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 DAAM2Q86T65 1068 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 STAMBPL1Q96FJ0 436 aa7.23□□□□□ -1.25
TRIM38-201ENST00000357085 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms