RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 INTS9Q9NV88 658 aaKnown RBP16.27■□□□□ 0.2
CHD4-201ENST00000357008 TMOD4Q9NZQ9 345 aa16.27■□□□□ 0.2
CHD4-201ENST00000357008 EXOC4Q96A65 974 aa16.27■□□□□ 0.2
CHD4-201ENST00000357008 SLC39A2Q9NP94 309 aa16.27■□□□□ 0.2
CHD4-201ENST00000357008 NOP56O00567 594 aaKnown RBP16.27■□□□□ 0.2
CHD4-201ENST00000357008 OPHN1O60890 802 aa16.27■□□□□ 0.2
CHD4-201ENST00000357008 ATF2P15336 505 aa16.27■□□□□ 0.2
CHD4-201ENST00000357008 VPS41P49754 854 aa16.27■□□□□ 0.2
CHD4-201ENST00000357008 FAM26FQ5R3K3 315 aa16.27■□□□□ 0.2
CHD4-201ENST00000357008 LARSQ9P2J5 1176 aaKnown RBP16.27■□□□□ 0.2
CHD4-201ENST00000357008 BAG2O95816 211 aa16.27■□□□□ 0.19
CHD4-201ENST00000357008 KRT19P08727 400 aa16.27■□□□□ 0.19
CHD4-201ENST00000357008 DNMT1P26358 1616 aaKnown RBP16.27■□□□□ 0.19
CHD4-201ENST00000357008 IFT88Q13099 833 aa16.27■□□□□ 0.19
CHD4-201ENST00000357008 HADHQ16836 314 aaKnown RBP16.27■□□□□ 0.19
CHD4-201ENST00000357008 C11orf57Q6ZUT1 292 aaPredicted RBP16.27■□□□□ 0.19
CHD4-201ENST00000357008 TBC1D22AQ8WUA7 517 aa16.27■□□□□ 0.19
CHD4-201ENST00000357008 CUEDC2Q9H467 287 aa16.27■□□□□ 0.19
CHD4-201ENST00000357008 SLFN12Q8IYM2 578 aa16.27■□□□□ 0.19
CHD4-201ENST00000357008 ANKRD13CQ8N6S4 541 aa16.27■□□□□ 0.19
CHD4-201ENST00000357008 CFAP61Q8NHU2 1237 aa16.27■□□□□ 0.19
CHD4-201ENST00000357008 LRRC8CQ8TDW0 803 aa16.27■□□□□ 0.19
CHD4-201ENST00000357008 TEKT1Q969V4 418 aa16.27■□□□□ 0.19
CHD4-201ENST00000357008 CDCA7Q9BWT1 371 aaPredicted RBP16.27■□□□□ 0.19
CHD4-201ENST00000357008 TRPC6Q9Y210 931 aa16.27■□□□□ 0.19
CHD4-201ENST00000357008 PEG3Q9GZU2 1588 aa16.27■□□□□ 0.19
CHD4-201ENST00000357008 A0A087WUV0 522 aaPredicted RBP16.26■□□□□ 0.19
CHD4-201ENST00000357008 EVI5O60447 810 aa16.26■□□□□ 0.19
CHD4-201ENST00000357008 CNOT6LQ96LI5 555 aaKnown RBP16.26■□□□□ 0.19
CHD4-201ENST00000357008 RASSF7Q02833 373 aa16.26■□□□□ 0.19
CHD4-201ENST00000357008 FOXP1Q9H334 677 aaPredicted RBP16.26■□□□□ 0.19
CHD4-201ENST00000357008 AZI2Q9H6S1 392 aa16.26■□□□□ 0.19
CHD4-201ENST00000357008 PICK1Q9NRD5 415 aa16.26■□□□□ 0.19
CHD4-201ENST00000357008 AFG3L2Q9Y4W6 797 aa16.26■□□□□ 0.19
CHD4-201ENST00000357008 ENC1O14682 589 aa16.26■□□□□ 0.19
CHD4-201ENST00000357008 P4HA1P13674 534 aa16.26■□□□□ 0.19
CHD4-201ENST00000357008 OTUD6AQ7L8S5 288 aa16.26■□□□□ 0.19
CHD4-201ENST00000357008 PNMA1Q8ND90 353 aa16.26■□□□□ 0.19
CHD4-201ENST00000357008 UHMK1Q8TAS1 419 aaKnown RBP16.26■□□□□ 0.19
CHD4-201ENST00000357008 PTPROQ16827 1216 aa16.26■□□□□ 0.19
CHD4-201ENST00000357008 TTC19Q6DKK2 380 aaPredicted RBP16.26■□□□□ 0.19
CHD4-201ENST00000357008 GSDMBQ8TAX9 411 aa16.26■□□□□ 0.19
CHD4-201ENST00000357008 COL4A3BPQ9Y5P4 624 aa16.26■□□□□ 0.19
CHD4-201ENST00000357008 ZBED4O75132 1171 aa16.26■□□□□ 0.19
CHD4-201ENST00000357008 PRPF6O94906 941 aaKnown RBP16.26■□□□□ 0.19
CHD4-201ENST00000357008 RBL2Q08999 1139 aa16.26■□□□□ 0.19
CHD4-201ENST00000357008 ZYXQ15942 572 aaKnown RBP16.26■□□□□ 0.19
CHD4-201ENST00000357008 PROCA1Q8NCQ7 364 aaPredicted RBP16.26■□□□□ 0.19
CHD4-201ENST00000357008 CCDC87Q9NVE4 849 aa16.26■□□□□ 0.19
CHD4-201ENST00000357008 RCOR1Q9UKL0 485 aa16.26■□□□□ 0.19
CHD4-201ENST00000357008 PDE6CP51160 858 aa16.26■□□□□ 0.19
CHD4-201ENST00000357008 NSMCE1Q8WV22 266 aa16.26■□□□□ 0.19
CHD4-201ENST00000357008 CD2BP2O95400 341 aaKnown RBP16.25■□□□□ 0.19
CHD4-201ENST00000357008 CTSWP56202 376 aa16.25■□□□□ 0.19
CHD4-201ENST00000357008 ARHGAP4P98171 946 aa16.25■□□□□ 0.19
CHD4-201ENST00000357008 ADAT2Q7Z6V5 191 aaKnown RBP16.25■□□□□ 0.19
CHD4-201ENST00000357008 PSTPIP2Q9H939 334 aa16.25■□□□□ 0.19
CHD4-201ENST00000357008 LRRD1A4D1F6 860 aa16.25■□□□□ 0.19
CHD4-201ENST00000357008 IL9RQ01113 521 aa16.25■□□□□ 0.19
CHD4-201ENST00000357008 DNAJC10Q8IXB1 793 aa16.25■□□□□ 0.19
CHD4-201ENST00000357008 TRAPPC10P48553 1259 aa16.25■□□□□ 0.19
CHD4-201ENST00000357008 MIER3Q7Z3K6 550 aa16.25■□□□□ 0.19
CHD4-201ENST00000357008 DHTKD1Q96HY7 919 aaPredicted RBP16.25■□□□□ 0.19
CHD4-201ENST00000357008 RNF14Q9UBS8 474 aa16.25■□□□□ 0.19
CHD4-201ENST00000357008 PCP11498 1178 aaKnown RBP16.25■□□□□ 0.19
CHD4-201ENST00000357008 EXOC3L4Q17RC7 722 aa16.25■□□□□ 0.19
CHD4-201ENST00000357008 HAUS1Q96CS2 278 aa16.25■□□□□ 0.19
CHD4-201ENST00000357008 TRIM6Q9C030 488 aaPredicted RBP16.25■□□□□ 0.19
CHD4-201ENST00000357008 C1orf112Q9NSG2 853 aa16.25■□□□□ 0.19
CHD4-201ENST00000357008 CARMIL3Q8ND23 1372 aa16.25■□□□□ 0.19
CHD4-201ENST00000357008 MAST1Q9Y2H9 1570 aa16.25■□□□□ 0.19
CHD4-201ENST00000357008 BSPRYQ5W0U4 402 aa16.25■□□□□ 0.19
CHD4-201ENST00000357008 ARMC9Q7Z3E5 817 aa16.25■□□□□ 0.19
CHD4-201ENST00000357008 NSUN7Q8NE18 718 aaKnown RBP16.25■□□□□ 0.19
CHD4-201ENST00000357008 NSMFQ6X4W1 530 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 CPXCR1Q8N123 301 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 DDX27Q96GQ7 796 aaKnown RBP16.24■□□□□ 0.19
CHD4-201ENST00000357008 KAT6BQ8WYB5 2073 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 SESN3P58005 492 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 RPS6KA2Q15349 733 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 RASIP1Q5U651 963 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 HINFPQ9BQA5 517 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 SPTLC3Q9NUV7 552 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 PLXNC1O60486 1568 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 KLRF2D3W0D1 207 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 LAD1O00515 517 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 HEXIM1O94992 359 aaKnown RBP16.24■□□□□ 0.19
CHD4-201ENST00000357008 PDE1CQ14123 709 aaPredicted RBP16.24■□□□□ 0.19
CHD4-201ENST00000357008 FAM178BQ8IXR5 827 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 EFCC1Q9HA90 598 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 WDR62O43379 1518 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 KDM5DQ9BY66 1539 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 UBE3CQ15386 1083 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 PARD6BQ9BYG5 372 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 HAUS2Q9NVX0 235 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 ABCC2Q92887 1545 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 TTC36A6NLP5 189 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 ATF7P17544 494 aaPredicted RBP16.24■□□□□ 0.19
CHD4-201ENST00000357008 LMNB1P20700 586 aa16.24■□□□□ 0.19
CHD4-201ENST00000357008 PPP2R5CQ13362 524 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms