RNA–Protein interactions for RNA: ENST00000356924.8

ABCD4-201, Transcript of ATP binding cassette subfamily D member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD4, Length 3,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-201ENST00000356924 TRIM75PA6NK02 468 aa12.68□□□□□ -0.38
ABCD4-201ENST00000356924 LMNB1P20700 586 aa12.68□□□□□ -0.38
ABCD4-201ENST00000356924 SLC16A2P36021 539 aa12.68□□□□□ -0.38
ABCD4-201ENST00000356924 TNNI2P48788 182 aa12.68□□□□□ -0.38
ABCD4-201ENST00000356924 GRIN1Q05586 938 aa12.68□□□□□ -0.38
ABCD4-201ENST00000356924 KIF4BQ2VIQ3 1234 aa12.68□□□□□ -0.38
ABCD4-201ENST00000356924 CGNQ9P2M7 1197 aaKnown RBP12.68□□□□□ -0.38
ABCD4-201ENST00000356924 ZBTB21Q9ULJ3 1066 aa12.68□□□□□ -0.38
ABCD4-201ENST00000356924 HPSEQ9Y251 543 aa12.68□□□□□ -0.38
ABCD4-201ENST00000356924 MRVI1Q9Y6F6 885 aa12.68□□□□□ -0.38
ABCD4-201ENST00000356924 F5H6K3 240 aa12.67□□□□□ -0.38
ABCD4-201ENST00000356924 PPP1R11O60927 126 aaPredicted RBP12.67□□□□□ -0.38
ABCD4-201ENST00000356924 PFKFB1P16118 471 aa12.67□□□□□ -0.38
ABCD4-201ENST00000356924 PTPREP23469 700 aa12.67□□□□□ -0.38
ABCD4-201ENST00000356924 NAPAP54920 295 aa12.67□□□□□ -0.38
ABCD4-201ENST00000356924 KLRC3Q07444 240 aa12.67□□□□□ -0.38
ABCD4-201ENST00000356924 RESP18Q5W5W9 173 aa12.67□□□□□ -0.38
ABCD4-201ENST00000356924 HACL1Q9UJ83 578 aa12.67□□□□□ -0.38
ABCD4-201ENST00000356924 USP17L10C9JJH3 530 aa12.67□□□□□ -0.38
ABCD4-201ENST00000356924 NDUFB10O96000 172 aa12.67□□□□□ -0.38
ABCD4-201ENST00000356924 CDK11BP21127 795 aaKnown RBP12.67□□□□□ -0.38
ABCD4-201ENST00000356924 TTC38Q5R3I4 469 aa12.67□□□□□ -0.38
ABCD4-201ENST00000356924 KRI1Q8N9T8 703 aaKnown RBP12.67□□□□□ -0.38
ABCD4-201ENST00000356924 GMCL1Q96IK5 515 aa12.67□□□□□ -0.38
ABCD4-201ENST00000356924 SYT17Q9BSW7 474 aa12.67□□□□□ -0.38
ABCD4-201ENST00000356924 SYNPO2Q9UMS6 1093 aa12.67□□□□□ -0.38
ABCD4-201ENST00000356924 CEP131Q9UPN4 1083 aa12.67□□□□□ -0.38
ABCD4-201ENST00000356924 hCG_1984214I3L0E3 225 aa12.67□□□□□ -0.38
ABCD4-201ENST00000356924 SLC1A4P43007 532 aa12.67□□□□□ -0.38
ABCD4-201ENST00000356924 ZNF174Q15697 407 aa12.67□□□□□ -0.38
ABCD4-201ENST00000356924 CKAP2LQ8IYA6 745 aa12.67□□□□□ -0.38
ABCD4-201ENST00000356924 ZNF713Q8N859 430 aaPredicted RBP12.67□□□□□ -0.38
ABCD4-201ENST00000356924 IPO4Q8TEX9 1081 aaKnown RBP12.67□□□□□ -0.38
ABCD4-201ENST00000356924 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.67□□□□□ -0.38
ABCD4-201ENST00000356924 SRPRBQ9Y5M8 271 aaKnown RBP12.67□□□□□ -0.38
ABCD4-201ENST00000356924 PNMA6FA0A0J9YX94 578 aa12.66□□□□□ -0.38
ABCD4-201ENST00000356924 ESYT2A0FGR8 921 aa12.66□□□□□ -0.38
ABCD4-201ENST00000356924 SMCO2A6NFE2 343 aa12.66□□□□□ -0.38
ABCD4-201ENST00000356924 PHF20L1A8MW92 1017 aa12.66□□□□□ -0.38
ABCD4-201ENST00000356924 CAP2P40123 477 aa12.66□□□□□ -0.38
ABCD4-201ENST00000356924 ECE1P42892 770 aa12.66□□□□□ -0.38
ABCD4-201ENST00000356924 TRAPPC10P48553 1259 aa12.66□□□□□ -0.38
ABCD4-201ENST00000356924 KIAA1755Q5JYT7 1200 aa12.66□□□□□ -0.38
ABCD4-201ENST00000356924 ACER1Q8TDN7 264 aa12.66□□□□□ -0.38
ABCD4-201ENST00000356924 CCDC12Q8WUD4 166 aaPredicted RBP12.66□□□□□ -0.38
ABCD4-201ENST00000356924 COA7Q96BR5 231 aa12.66□□□□□ -0.38
ABCD4-201ENST00000356924 FEZ1Q99689 392 aa12.66□□□□□ -0.38
ABCD4-201ENST00000356924 NUP88Q99567 741 aaPredicted RBP12.66□□□□□ -0.38
ABCD4-201ENST00000356924 GPRC5DQ9NZD1 345 aa12.66□□□□□ -0.38
ABCD4-201ENST00000356924 YBX3P16989 372 aaKnown RBP eCLIP12.65□□□□□ -0.38
ABCD4-201ENST00000356924 TNFAIP1Q13829 316 aa12.65□□□□□ -0.38
ABCD4-201ENST00000356924 UVSSAQ2YD98 709 aa12.65□□□□□ -0.38
ABCD4-201ENST00000356924 GPC2Q8N158 579 aa12.65□□□□□ -0.38
ABCD4-201ENST00000356924 TRPM4Q8TD43 1214 aa12.65□□□□□ -0.38
ABCD4-201ENST00000356924 C6orf50Q9HD87 102 aa12.65□□□□□ -0.38
ABCD4-201ENST00000356924 TMX2Q9Y320 296 aa12.65□□□□□ -0.38
ABCD4-201ENST00000356924 RAD21O60216 631 aa12.65□□□□□ -0.38
ABCD4-201ENST00000356924 KINO60870 393 aaKnown RBP12.65□□□□□ -0.38
ABCD4-201ENST00000356924 ZNF202O95125 648 aa12.65□□□□□ -0.38
ABCD4-201ENST00000356924 ZNF579Q8NAF0 562 aaKnown RBP12.65□□□□□ -0.38
ABCD4-201ENST00000356924 TTC12Q9H892 705 aaPredicted RBP12.65□□□□□ -0.38
ABCD4-201ENST00000356924 ARHGEF10LQ9HCE6 1279 aa12.65□□□□□ -0.38
ABCD4-201ENST00000356924 SPTLC3Q9NUV7 552 aa12.65□□□□□ -0.38
ABCD4-201ENST00000356924 H7C1D1 291 aa12.64□□□□□ -0.39
ABCD4-201ENST00000356924 ZBTB5O15062 677 aa12.64□□□□□ -0.39
ABCD4-201ENST00000356924 CTAGE5O15320 804 aa12.64□□□□□ -0.39
ABCD4-201ENST00000356924 ATP2C1P98194 919 aaPredicted RBP12.64□□□□□ -0.39
ABCD4-201ENST00000356924 C4orf32Q8N8J7 132 aa12.64□□□□□ -0.39
ABCD4-201ENST00000356924 BMP15O95972 392 aa12.64□□□□□ -0.39
ABCD4-201ENST00000356924 GNA11P29992 359 aa12.64□□□□□ -0.39
ABCD4-201ENST00000356924 TYRO3Q06418 890 aa12.64□□□□□ -0.39
ABCD4-201ENST00000356924 SPECC1Q5M775 1068 aa12.64□□□□□ -0.39
ABCD4-201ENST00000356924 PPP1R18Q6NYC8 613 aa12.64□□□□□ -0.39
ABCD4-201ENST00000356924 ILDR2Q71H61 639 aa12.64□□□□□ -0.39
ABCD4-201ENST00000356924 TRERF1Q96PN7 1200 aa12.64□□□□□ -0.39
ABCD4-201ENST00000356924 CCDC194A0A1B0GVG4 234 aa12.64□□□□□ -0.39
ABCD4-201ENST00000356924 BMP3P12645 472 aa12.64□□□□□ -0.39
ABCD4-201ENST00000356924 QRICH1Q2TAL8 776 aa12.64□□□□□ -0.39
ABCD4-201ENST00000356924 BTNL9Q6UXG8 535 aa12.64□□□□□ -0.39
ABCD4-201ENST00000356924 CSRNP2Q9H175 543 aa12.64□□□□□ -0.39
ABCD4-201ENST00000356924 DEFB129Q9H1M3 183 aa12.64□□□□□ -0.39
ABCD4-201ENST00000356924 CCDC192P0DO97 292 aa12.63□□□□□ -0.39
ABCD4-201ENST00000356924 EPS15P42566 896 aa12.63□□□□□ -0.39
ABCD4-201ENST00000356924 HIRAP54198 1017 aaPredicted RBP12.63□□□□□ -0.39
ABCD4-201ENST00000356924 PTGDRQ13258 359 aa12.63□□□□□ -0.39
ABCD4-201ENST00000356924 INF2Q27J81 1249 aa12.63□□□□□ -0.39
ABCD4-201ENST00000356924 TIGD1Q96MW7 591 aa12.63□□□□□ -0.39
ABCD4-201ENST00000356924 TMEM260Q9NX78 707 aa12.63□□□□□ -0.39
ABCD4-201ENST00000356924 OGFRQ9NZT2 677 aa12.63□□□□□ -0.39
ABCD4-201ENST00000356924 MCM7P33993 719 aa12.63□□□□□ -0.39
ABCD4-201ENST00000356924 SYKP43405 635 aa12.63□□□□□ -0.39
ABCD4-201ENST00000356924 NBPF12Q5TAG4 269 aaPredicted RBP12.63□□□□□ -0.39
ABCD4-201ENST00000356924 KRT25Q7Z3Z0 450 aa12.63□□□□□ -0.39
ABCD4-201ENST00000356924 CCDC84Q86UT8 332 aaPredicted RBP12.63□□□□□ -0.39
ABCD4-201ENST00000356924 GLIS2Q9BZE0 524 aaPredicted RBP12.63□□□□□ -0.39
ABCD4-201ENST00000356924 TMEM232C9JQI7 657 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 ADCY7P51828 1080 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 CDC37Q16543 378 aaPredicted RBP12.62□□□□□ -0.39
ABCD4-201ENST00000356924 IL17AQ16552 155 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 SYDE2Q5VT97 1194 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms