RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ELP1O95163 1332 aa20.85■□□□□ 0.93
SMARCD3-202ENST00000356800 C19orf81C9J6K1 198 aa20.84■□□□□ 0.93
SMARCD3-202ENST00000356800 LDLRAD1Q5T700 205 aa20.84■□□□□ 0.93
SMARCD3-202ENST00000356800 ARMC9Q7Z3E5 817 aa20.84■□□□□ 0.93
SMARCD3-202ENST00000356800 FAM160B2Q86V87 743 aa20.84■□□□□ 0.93
SMARCD3-202ENST00000356800 BRMS1Q9HCU9 246 aa20.84■□□□□ 0.93
SMARCD3-202ENST00000356800 ESYT2A0FGR8 921 aa20.83■□□□□ 0.93
SMARCD3-202ENST00000356800 SMCO2A6NFE2 343 aa20.83■□□□□ 0.93
SMARCD3-202ENST00000356800 TOB1P50616 345 aaPredicted RBP20.83■□□□□ 0.93
SMARCD3-202ENST00000356800 CEBPZQ03701 1054 aaKnown RBP20.83■□□□□ 0.93
SMARCD3-202ENST00000356800 GALNT17Q6IS24 598 aa20.83■□□□□ 0.93
SMARCD3-202ENST00000356800 CCDC12Q8WUD4 166 aaPredicted RBP20.83■□□□□ 0.93
SMARCD3-202ENST00000356800 LEO1Q8WVC0 666 aaPredicted RBP20.83■□□□□ 0.93
SMARCD3-202ENST00000356800 KIFC2Q96AC6 838 aa20.83■□□□□ 0.93
SMARCD3-202ENST00000356800 ZNF408Q9H9D4 720 aa20.83■□□□□ 0.93
SMARCD3-202ENST00000356800 MBD3O95983 291 aa20.83■□□□□ 0.92
SMARCD3-202ENST00000356800 RASGRP4Q8TDF6 673 aa20.83■□□□□ 0.92
SMARCD3-202ENST00000356800 RANBP17Q9H2T7 1088 aaKnown RBP20.83■□□□□ 0.92
SMARCD3-202ENST00000356800 RPAP3Q9H6T3 665 aaPredicted RBP20.83■□□□□ 0.92
SMARCD3-202ENST00000356800 CLIC4Q9Y696 253 aa20.83■□□□□ 0.92
SMARCD3-202ENST00000356800 LOC285556D6RIA3 1793 aa20.82■□□□□ 0.92
SMARCD3-202ENST00000356800 GADD45BO75293 160 aaPredicted RBP20.82■□□□□ 0.92
SMARCD3-202ENST00000356800 UBE2HP62256 183 aa20.82■□□□□ 0.92
SMARCD3-202ENST00000356800 SH3D19Q5HYK7 790 aa20.82■□□□□ 0.92
SMARCD3-202ENST00000356800 PPP1R18Q6NYC8 613 aa20.82■□□□□ 0.92
SMARCD3-202ENST00000356800 SPATA32Q96LK8 384 aa20.82■□□□□ 0.92
SMARCD3-202ENST00000356800 TANGO6Q9C0B7 1094 aa20.82■□□□□ 0.92
SMARCD3-202ENST00000356800 RTEL1Q9NZ71 1219 aa20.82■□□□□ 0.92
SMARCD3-202ENST00000356800 PCDHA6Q9UN73 950 aa20.82■□□□□ 0.92
SMARCD3-202ENST00000356800 PCDHA8Q9Y5H6 950 aa20.82■□□□□ 0.92
SMARCD3-202ENST00000356800 SPDYE5A6NIY4 337 aa20.81■□□□□ 0.92
SMARCD3-202ENST00000356800 TAL1P17542 331 aaPredicted RBP20.81■□□□□ 0.92
SMARCD3-202ENST00000356800 PPATQ06203 517 aa20.81■□□□□ 0.92
SMARCD3-202ENST00000356800 ERO1BQ86YB8 467 aa20.81■□□□□ 0.92
SMARCD3-202ENST00000356800 GPT2Q8TD30 523 aa20.81■□□□□ 0.92
SMARCD3-202ENST00000356800 OTUD5Q96G74 571 aa20.81■□□□□ 0.92
SMARCD3-202ENST00000356800 SLF1Q9BQI6 1058 aa20.81■□□□□ 0.92
SMARCD3-202ENST00000356800 AMNQ9BXJ7 453 aa20.81■□□□□ 0.92
SMARCD3-202ENST00000356800 C6orf50Q9HD87 102 aa20.81■□□□□ 0.92
SMARCD3-202ENST00000356800 POLR3EQ9NVU0 708 aa20.81■□□□□ 0.92
SMARCD3-202ENST00000356800 RCOR1Q9UKL0 485 aa20.81■□□□□ 0.92
SMARCD3-202ENST00000356800 PCDHA1Q9Y5I3 950 aa20.81■□□□□ 0.92
SMARCD3-202ENST00000356800 TRPM7Q96QT4 1865 aa20.81■□□□□ 0.92
SMARCD3-202ENST00000356800 NASPP49321 788 aaPredicted RBP20.8■□□□□ 0.92
SMARCD3-202ENST00000356800 ANO1Q5XXA6 986 aa20.8■□□□□ 0.92
SMARCD3-202ENST00000356800 SAMD1Q6SPF0 538 aaPredicted RBP20.8■□□□□ 0.92
SMARCD3-202ENST00000356800 FBXO11Q86XK2 927 aa20.8■□□□□ 0.92
SMARCD3-202ENST00000356800 RBM46Q8TBY0 533 aaKnown RBP20.8■□□□□ 0.92
SMARCD3-202ENST00000356800 COL11A1P12107 1806 aaPredicted RBP20.8■□□□□ 0.92
SMARCD3-202ENST00000356800 IRF6O14896 467 aa20.8■□□□□ 0.92
SMARCD3-202ENST00000356800 ITGBL1O95965 494 aaPredicted RBP20.8■□□□□ 0.92
SMARCD3-202ENST00000356800 GNA11P29992 359 aa20.8■□□□□ 0.92
SMARCD3-202ENST00000356800 ADCY7P51828 1080 aa20.8■□□□□ 0.92
SMARCD3-202ENST00000356800 PRPF38AQ8NAV1 312 aaKnown RBP20.8■□□□□ 0.92
SMARCD3-202ENST00000356800 RIC8AQ9NPQ8 531 aa20.8■□□□□ 0.92
SMARCD3-202ENST00000356800 WNT7AO00755 349 aa20.79■□□□□ 0.92
SMARCD3-202ENST00000356800 FLOT1O75955 427 aa20.79■□□□□ 0.92
SMARCD3-202ENST00000356800 USH1GQ495M9 461 aa20.79■□□□□ 0.92
SMARCD3-202ENST00000356800 RILPL1Q5EBL4 403 aa20.79■□□□□ 0.92
SMARCD3-202ENST00000356800 CCDC174Q6PII3 467 aa20.79■□□□□ 0.92
SMARCD3-202ENST00000356800 PIK3AP1Q6ZUJ8 805 aa20.79■□□□□ 0.92
SMARCD3-202ENST00000356800 LINC00301Q8NCQ3 95 aa20.79■□□□□ 0.92
SMARCD3-202ENST00000356800 TMOD4Q9NZQ9 345 aa20.79■□□□□ 0.92
SMARCD3-202ENST00000356800 PPP1R9AQ9ULJ8 1098 aa20.79■□□□□ 0.92
SMARCD3-202ENST00000356800 PPIL2Q13356 520 aa20.78■□□□□ 0.92
SMARCD3-202ENST00000356800 SF3A1Q15459 793 aaKnown RBP20.78■□□□□ 0.92
SMARCD3-202ENST00000356800 CHADLQ6NUI6 762 aa20.78■□□□□ 0.92
SMARCD3-202ENST00000356800 OPTNQ96CV9 577 aa20.78■□□□□ 0.92
SMARCD3-202ENST00000356800 CELF2O95319 508 aaKnown RBP20.77■□□□□ 0.92
SMARCD3-202ENST00000356800 YEATS4O95619 227 aa20.77■□□□□ 0.92
SMARCD3-202ENST00000356800 GJA5P36382 358 aa20.77■□□□□ 0.92
SMARCD3-202ENST00000356800 PTPAQ15257 358 aa20.77■□□□□ 0.92
SMARCD3-202ENST00000356800 PGBD1Q96JS3 809 aa20.77■□□□□ 0.92
SMARCD3-202ENST00000356800 GBA2Q9HCG7 927 aaPredicted RBP20.77■□□□□ 0.92
SMARCD3-202ENST00000356800 TMEM260Q9NX78 707 aa20.77■□□□□ 0.92
SMARCD3-202ENST00000356800 BIN2Q9UBW5 565 aaPredicted RBP20.77■□□□□ 0.92
SMARCD3-202ENST00000356800 KCNH4Q9UQ05 1017 aa20.77■□□□□ 0.92
SMARCD3-202ENST00000356800 PCDHB6Q9Y5E3 794 aa20.77■□□□□ 0.92
SMARCD3-202ENST00000356800 ZNF536O15090 1300 aa20.77■□□□□ 0.92
SMARCD3-202ENST00000356800 A0A0G2JLL6 359 aaPredicted RBP20.77■□□□□ 0.91
SMARCD3-202ENST00000356800 UNCXA6NJT0 531 aa20.77■□□□□ 0.91
SMARCD3-202ENST00000356800 OPLAHO14841 1288 aa20.77■□□□□ 0.91
SMARCD3-202ENST00000356800 CLK2P49760 499 aaKnown RBP20.77■□□□□ 0.91
SMARCD3-202ENST00000356800 FKBP1BP68106 108 aa20.77■□□□□ 0.91
SMARCD3-202ENST00000356800 CATSPERGQ6ZRH7 1159 aa20.77■□□□□ 0.91
SMARCD3-202ENST00000356800 PRRT2Q7Z6L0 340 aaPredicted RBP20.77■□□□□ 0.91
SMARCD3-202ENST00000356800 REXO1Q8N1G1 1221 aaKnown RBP20.77■□□□□ 0.91
SMARCD3-202ENST00000356800 BICD2Q8TD16 824 aa20.77■□□□□ 0.91
SMARCD3-202ENST00000356800 PSTPIP2Q9H939 334 aa20.77■□□□□ 0.91
SMARCD3-202ENST00000356800 SLC38A10Q9HBR0 1119 aa20.77■□□□□ 0.91
SMARCD3-202ENST00000356800 CXCL11O14625 94 aa20.76■□□□□ 0.91
SMARCD3-202ENST00000356800 ATP2B1P20020 1258 aa20.76■□□□□ 0.91
SMARCD3-202ENST00000356800 SLC39A14Q15043 492 aa20.76■□□□□ 0.91
SMARCD3-202ENST00000356800 STK38Q15208 465 aa20.76■□□□□ 0.91
SMARCD3-202ENST00000356800 UBE2SQ16763 222 aa20.76■□□□□ 0.91
SMARCD3-202ENST00000356800 TREML2Q5T2D2 321 aa20.76■□□□□ 0.91
SMARCD3-202ENST00000356800 JAKMIP3Q5VZ66 844 aa20.76■□□□□ 0.91
SMARCD3-202ENST00000356800 CST9Q5W186 159 aa20.76■□□□□ 0.91
SMARCD3-202ENST00000356800 CUL5Q93034 780 aa20.76■□□□□ 0.91
SMARCD3-202ENST00000356800 WNK4Q96J92 1243 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms