RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 BIN2Q9UBW5 565 aaPredicted RBP29.24■■■□□ 2.27
CLK2-201ENST00000355560 GOLGA6L19H0YKK7 550 aa29.23■■■□□ 2.27
CLK2-201ENST00000355560 FOXN1O15353 648 aa29.23■■■□□ 2.27
CLK2-201ENST00000355560 ACTN4O43707 911 aaKnown RBP29.23■■■□□ 2.27
CLK2-201ENST00000355560 PPP1R18Q6NYC8 613 aa29.23■■■□□ 2.27
CLK2-201ENST00000355560 A0A087X0B3 334 aa29.23■■■□□ 2.27
CLK2-201ENST00000355560 IL17AQ16552 155 aa29.23■■■□□ 2.27
CLK2-201ENST00000355560 BECN2A8MW95 431 aa29.22■■■□□ 2.27
CLK2-201ENST00000355560 NDUFB10O96000 172 aa29.22■■■□□ 2.27
CLK2-201ENST00000355560 MDM2Q00987 491 aaPredicted RBP29.22■■■□□ 2.27
CLK2-201ENST00000355560 POSTNQ15063 836 aa29.22■■■□□ 2.27
CLK2-201ENST00000355560 JAKMIP3Q5VZ66 844 aa29.22■■■□□ 2.27
CLK2-201ENST00000355560 DHX40Q8IX18 779 aaKnown RBP29.22■■■□□ 2.27
CLK2-201ENST00000355560 FAM43AQ8N2R8 423 aa29.22■■■□□ 2.27
CLK2-201ENST00000355560 NLGN2Q8NFZ4 835 aa29.22■■■□□ 2.27
CLK2-201ENST00000355560 DHX58Q96C10 678 aa29.22■■■□□ 2.27
CLK2-201ENST00000355560 UTRNP46939 3433 aa29.22■■■□□ 2.27
CLK2-201ENST00000355560 RPS12P25398 132 aaKnown RBP29.21■■■□□ 2.27
CLK2-201ENST00000355560 GMCL1Q96IK5 515 aa29.21■■■□□ 2.27
CLK2-201ENST00000355560 PTMAP06454 111 aaKnown RBP29.21■■■□□ 2.27
CLK2-201ENST00000355560 ISM2Q6H9L7 571 aa29.21■■■□□ 2.27
CLK2-201ENST00000355560 NEK8Q86SG6 692 aa29.21■■■□□ 2.27
CLK2-201ENST00000355560 TMEM260Q9NX78 707 aa29.21■■■□□ 2.27
CLK2-201ENST00000355560 CCDC39Q9UFE4 941 aa29.21■■■□□ 2.27
CLK2-201ENST00000355560 PCDHA5Q9Y5H7 936 aa29.21■■■□□ 2.27
CLK2-201ENST00000355560 A0A1W2PRG0 241 aa29.2■■■□□ 2.27
CLK2-201ENST00000355560 ESPNB1AK53 854 aa29.2■■■□□ 2.27
CLK2-201ENST00000355560 ZNF280AP59817 542 aaPredicted RBP29.2■■■□□ 2.27
CLK2-201ENST00000355560 LETM2Q2VYF4 491 aa29.2■■■□□ 2.27
CLK2-201ENST00000355560 KANK3Q6NY19 840 aa29.2■■■□□ 2.27
CLK2-201ENST00000355560 MIGA2Q7L4E1 593 aa29.2■■■□□ 2.27
CLK2-201ENST00000355560 NUP88Q99567 741 aaPredicted RBP29.2■■■□□ 2.27
CLK2-201ENST00000355560 PRELPP51888 382 aa29.2■■■□□ 2.26
CLK2-201ENST00000355560 AOPEPQ8N6M6 819 aa29.2■■■□□ 2.26
CLK2-201ENST00000355560 TBCKQ8TEA7 893 aa29.2■■■□□ 2.26
CLK2-201ENST00000355560 TMEM60Q9H2L4 133 aa29.2■■■□□ 2.26
CLK2-201ENST00000355560 ZBTB21Q9ULJ3 1066 aa29.2■■■□□ 2.26
CLK2-201ENST00000355560 TBC1D12O60347 775 aa29.19■■■□□ 2.26
CLK2-201ENST00000355560 EGFRP00533 1210 aa29.19■■■□□ 2.26
CLK2-201ENST00000355560 RTN4Q9NQC3 1192 aaKnown RBP29.19■■■□□ 2.26
CLK2-201ENST00000355560 SYNPO2Q9UMS6 1093 aa29.19■■■□□ 2.26
CLK2-201ENST00000355560 CCNT1O60563 726 aaKnown RBP29.18■■■□□ 2.26
CLK2-201ENST00000355560 PRR29P0C7W0 189 aa29.18■■■□□ 2.26
CLK2-201ENST00000355560 LONP1P36776 959 aaKnown RBP29.18■■■□□ 2.26
CLK2-201ENST00000355560 MMP14P50281 582 aa29.18■■■□□ 2.26
CLK2-201ENST00000355560 QRICH1Q2TAL8 776 aa29.18■■■□□ 2.26
CLK2-201ENST00000355560 GRAMD1CQ8IYS0 662 aa29.18■■■□□ 2.26
CLK2-201ENST00000355560 ARHGEF10LQ9HCE6 1279 aa29.18■■■□□ 2.26
CLK2-201ENST00000355560 RIC8AQ9NPQ8 531 aa29.18■■■□□ 2.26
CLK2-201ENST00000355560 LAD1O00515 517 aa29.18■■■□□ 2.26
CLK2-201ENST00000355560 CDC37Q16543 378 aaPredicted RBP29.18■■■□□ 2.26
CLK2-201ENST00000355560 CCDC34Q96HJ3 373 aa29.18■■■□□ 2.26
CLK2-201ENST00000355560 BPIFA3Q9BQP9 254 aa29.18■■■□□ 2.26
CLK2-201ENST00000355560 PGAP2Q9UHJ9 254 aa29.18■■■□□ 2.26
CLK2-201ENST00000355560 SCAF8Q9UPN6 1271 aaKnown RBP29.18■■■□□ 2.26
CLK2-201ENST00000355560 ECE1P42892 770 aa29.17■■■□□ 2.26
CLK2-201ENST00000355560 TNNI2P48788 182 aa29.17■■■□□ 2.26
CLK2-201ENST00000355560 GMPSP49915 693 aaPredicted RBP29.17■■■□□ 2.26
CLK2-201ENST00000355560 DTHD1Q6ZMT9 781 aa29.17■■■□□ 2.26
CLK2-201ENST00000355560 RRAGDQ9NQL2 400 aaPredicted RBP29.17■■■□□ 2.26
CLK2-201ENST00000355560 GJA3Q9Y6H8 435 aa29.17■■■□□ 2.26
CLK2-201ENST00000355560 FZD9O00144 591 aa29.17■■■□□ 2.26
CLK2-201ENST00000355560 SLFN14P0C7P3 912 aa29.17■■■□□ 2.26
CLK2-201ENST00000355560 MICALL2Q8IY33 904 aa29.17■■■□□ 2.26
CLK2-201ENST00000355560 CUL5Q93034 780 aa29.17■■■□□ 2.26
CLK2-201ENST00000355560 BMP3P12645 472 aa29.16■■■□□ 2.26
CLK2-201ENST00000355560 IKQ13123 557 aaPredicted RBP29.16■■■□□ 2.26
CLK2-201ENST00000355560 SPICE1Q8N0Z3 855 aa29.16■■■□□ 2.26
CLK2-201ENST00000355560 TRIM5Q9C035 493 aa29.16■■■□□ 2.26
CLK2-201ENST00000355560 RASA3Q14644 834 aa29.15■■■□□ 2.26
CLK2-201ENST00000355560 ZSCAN30Q86W11 494 aa29.15■■■□□ 2.26
CLK2-201ENST00000355560 TMEM232C9JQI7 657 aa29.15■■■□□ 2.26
CLK2-201ENST00000355560 NEMFO60524 1076 aa29.15■■■□□ 2.26
CLK2-201ENST00000355560 PRPHP41219 470 aa29.15■■■□□ 2.26
CLK2-201ENST00000355560 UBE2SQ16763 222 aa29.15■■■□□ 2.26
CLK2-201ENST00000355560 ACER1Q8TDN7 264 aa29.15■■■□□ 2.26
CLK2-201ENST00000355560 NT5DC1Q5TFE4 455 aa29.14■■■□□ 2.26
CLK2-201ENST00000355560 SMARCE1Q969G3 411 aa29.14■■■□□ 2.26
CLK2-201ENST00000355560 PCDHA1Q9Y5I3 950 aa29.14■■■□□ 2.26
CLK2-201ENST00000355560 OR52Z1P0C646 297 aa29.14■■■□□ 2.25
CLK2-201ENST00000355560 TXLNAP40222 546 aa29.14■■■□□ 2.25
CLK2-201ENST00000355560 MRPL12P52815 198 aaKnown RBP29.14■■■□□ 2.25
CLK2-201ENST00000355560 TNFAIP1Q13829 316 aa29.14■■■□□ 2.25
CLK2-201ENST00000355560 SAMD7Q7Z3H4 446 aa29.14■■■□□ 2.25
CLK2-201ENST00000355560 DPF2Q92785 391 aa29.14■■■□□ 2.25
CLK2-201ENST00000355560 PYM1Q9BRP8 204 aaKnown RBP29.14■■■□□ 2.25
CLK2-201ENST00000355560 PSTPIP2Q9H939 334 aa29.14■■■□□ 2.25
CLK2-201ENST00000355560 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.14■■■□□ 2.25
CLK2-201ENST00000355560 TMX2Q9Y320 296 aa29.14■■■□□ 2.25
CLK2-201ENST00000355560 CDC25AP30304 524 aa29.13■■■□□ 2.25
CLK2-201ENST00000355560 CAP2P40123 477 aa29.13■■■□□ 2.25
CLK2-201ENST00000355560 CLK2P49760 499 aaKnown RBP29.13■■■□□ 2.25
CLK2-201ENST00000355560 SYDE2Q5VT97 1194 aa29.13■■■□□ 2.25
CLK2-201ENST00000355560 IQUBQ8NA54 791 aa29.13■■■□□ 2.25
CLK2-201ENST00000355560 MAN1B1Q9UKM7 699 aa29.13■■■□□ 2.25
CLK2-201ENST00000355560 AFMP43652 599 aa29.12■■■□□ 2.25
CLK2-201ENST00000355560 SARSP49591 514 aaKnown RBP29.12■■■□□ 2.25
CLK2-201ENST00000355560 E2F4Q16254 413 aa29.12■■■□□ 2.25
CLK2-201ENST00000355560 PLA2G4DQ86XP0 818 aa29.12■■■□□ 2.25
CLK2-201ENST00000355560 PAGE5Q96GU1 130 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms