RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 PDCD2Q16342 344 aaPredicted RBP16.28■□□□□ 0.2
LMX1B-201ENST00000355497 ARHGEF16Q5VV41 709 aa16.28■□□□□ 0.2
LMX1B-201ENST00000355497 MORC4Q8TE76 937 aa16.28■□□□□ 0.2
LMX1B-201ENST00000355497 HAUS4Q9H6D7 363 aa16.28■□□□□ 0.2
LMX1B-201ENST00000355497 TRPM2O94759 1503 aa16.28■□□□□ 0.2
LMX1B-201ENST00000355497 LMNB1P20700 586 aa16.28■□□□□ 0.2
LMX1B-201ENST00000355497 TECP42680 631 aa16.28■□□□□ 0.2
LMX1B-201ENST00000355497 PTPROQ16827 1216 aa16.28■□□□□ 0.2
LMX1B-201ENST00000355497 LRRD1A4D1F6 860 aa16.28■□□□□ 0.2
LMX1B-201ENST00000355497 EVI5O60447 810 aa16.28■□□□□ 0.2
LMX1B-201ENST00000355497 HOXB7P09629 217 aa16.28■□□□□ 0.2
LMX1B-201ENST00000355497 CASP2P42575 452 aa16.28■□□□□ 0.2
LMX1B-201ENST00000355497 BLIDQ8IZY5 108 aa16.28■□□□□ 0.2
LMX1B-201ENST00000355497 UHMK1Q8TAS1 419 aaKnown RBP16.28■□□□□ 0.2
LMX1B-201ENST00000355497 CCNL1Q9UK58 526 aaPredicted RBP16.28■□□□□ 0.2
LMX1B-201ENST00000355497 UBAP1LF5GYI3 381 aa16.28■□□□□ 0.2
LMX1B-201ENST00000355497 IL9RQ01113 521 aa16.28■□□□□ 0.2
LMX1B-201ENST00000355497 CDR2Q01850 454 aa16.28■□□□□ 0.2
LMX1B-201ENST00000355497 PPP2R5AQ15172 486 aa16.28■□□□□ 0.2
LMX1B-201ENST00000355497 ADAT2Q7Z6V5 191 aaKnown RBP16.28■□□□□ 0.2
LMX1B-201ENST00000355497 SUN1O94901 812 aa16.27■□□□□ 0.2
LMX1B-201ENST00000355497 NOSTRINQ8IVI9 506 aa16.27■□□□□ 0.2
LMX1B-201ENST00000355497 HESX1Q9UBX0 185 aa16.27■□□□□ 0.2
LMX1B-201ENST00000355497 MAD1L1Q9Y6D9 718 aa16.27■□□□□ 0.2
LMX1B-201ENST00000355497 H7C1D1 291 aa16.27■□□□□ 0.2
LMX1B-201ENST00000355497 GPC4O75487 556 aa16.27■□□□□ 0.2
LMX1B-201ENST00000355497 TRIML1Q8N9V2 468 aa16.27■□□□□ 0.2
LMX1B-201ENST00000355497 NR1I2O75469 434 aa16.27■□□□□ 0.2
LMX1B-201ENST00000355497 YWHAGP61981 247 aaKnown RBP eCLIP16.27■□□□□ 0.2
LMX1B-201ENST00000355497 KAZNQ674X7 775 aa16.27■□□□□ 0.2
LMX1B-201ENST00000355497 RASEFQ8IZ41 740 aa16.27■□□□□ 0.2
LMX1B-201ENST00000355497 ZNF654Q8IZM8 581 aa16.27■□□□□ 0.2
LMX1B-201ENST00000355497 MLXIPQ9HAP2 919 aa16.27■□□□□ 0.2
LMX1B-201ENST00000355497 GCP02774 474 aa16.27■□□□□ 0.19
LMX1B-201ENST00000355497 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.27■□□□□ 0.19
LMX1B-201ENST00000355497 CHURC1Q8WUH1 139 aa16.27■□□□□ 0.19
LMX1B-201ENST00000355497 ZNF148Q9UQR1 794 aa16.27■□□□□ 0.19
LMX1B-201ENST00000355497 PALM3A6NDB9 673 aaPredicted RBP16.27■□□□□ 0.19
LMX1B-201ENST00000355497 ABL1P00519 1130 aa16.27■□□□□ 0.19
LMX1B-201ENST00000355497 POLR2BP30876 1174 aaKnown RBP16.27■□□□□ 0.19
LMX1B-201ENST00000355497 RAB44Q7Z6P3 723 aaPredicted RBP16.27■□□□□ 0.19
LMX1B-201ENST00000355497 LARGE2Q8N3Y3 721 aa16.27■□□□□ 0.19
LMX1B-201ENST00000355497 TESPA1A2RU30 521 aaPredicted RBP16.26■□□□□ 0.19
LMX1B-201ENST00000355497 C4orf50Q6ZRC1 276 aa16.26■□□□□ 0.19
LMX1B-201ENST00000355497 ZSCAN10Q96SZ4 725 aaPredicted RBP16.26■□□□□ 0.19
LMX1B-201ENST00000355497 PRAG1Q86YV5 1406 aa16.26■□□□□ 0.19
LMX1B-201ENST00000355497 PDE6BP35913 854 aa16.26■□□□□ 0.19
LMX1B-201ENST00000355497 METTL14Q9HCE5 456 aaKnown RBP16.26■□□□□ 0.19
LMX1B-201ENST00000355497 PRKG1Q13976 671 aa16.26■□□□□ 0.19
LMX1B-201ENST00000355497 TAB3Q8N5C8 712 aaPredicted RBP16.26■□□□□ 0.19
LMX1B-201ENST00000355497 ZNF274Q96GC6 653 aaPredicted RBP16.26■□□□□ 0.19
LMX1B-201ENST00000355497 A6NJR5 290 aa16.26■□□□□ 0.19
LMX1B-201ENST00000355497 EIF3CLB5ME19 914 aaKnown RBP16.26■□□□□ 0.19
LMX1B-201ENST00000355497 H7C0C1 242 aa16.26■□□□□ 0.19
LMX1B-201ENST00000355497 GTPBP6O43824 516 aaPredicted RBP16.26■□□□□ 0.19
LMX1B-201ENST00000355497 INHBAP08476 426 aa16.26■□□□□ 0.19
LMX1B-201ENST00000355497 H2AFZP0C0S5 128 aa16.26■□□□□ 0.19
LMX1B-201ENST00000355497 ATP5OP48047 213 aa16.26■□□□□ 0.19
LMX1B-201ENST00000355497 STX1BP61266 288 aa16.26■□□□□ 0.19
LMX1B-201ENST00000355497 RNASELQ05823 741 aaKnown RBP16.26■□□□□ 0.19
LMX1B-201ENST00000355497 ME3Q16798 604 aa16.26■□□□□ 0.19
LMX1B-201ENST00000355497 XKR9Q5GH70 373 aa16.26■□□□□ 0.19
LMX1B-201ENST00000355497 AP1ARQ63HQ0 302 aa16.26■□□□□ 0.19
LMX1B-201ENST00000355497 H2AFVQ71UI9 128 aa16.26■□□□□ 0.19
LMX1B-201ENST00000355497 SKA2Q8WVK7 121 aaPredicted RBP16.26■□□□□ 0.19
LMX1B-201ENST00000355497 MYCBPQ99417 103 aaPredicted RBP16.26■□□□□ 0.19
LMX1B-201ENST00000355497 EIF3CQ99613 913 aaKnown RBP16.26■□□□□ 0.19
LMX1B-201ENST00000355497 TM6SF1Q9BZW5 370 aa16.26■□□□□ 0.19
LMX1B-201ENST00000355497 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.26■□□□□ 0.19
LMX1B-201ENST00000355497 CCDC197Q8NCU1 140 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 TBC1D22AQ8WUA7 517 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.25■□□□□ 0.19
LMX1B-201ENST00000355497 ANAPC5Q9UJX4 755 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 ORC6Q9Y5N6 252 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 NDUFB9Q9Y6M9 179 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 LMNB2Q03252 620 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 SPZ1Q9BXG8 430 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 PSTPIP2Q9H939 334 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 TMEM63CQ9P1W3 806 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 VGLL3A8MV65 326 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 BRD1O95696 1058 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 KSR1Q8IVT5 923 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 LRRC8AQ8IWT6 810 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 AS3MTQ9HBK9 375 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 STK32BQ9NY57 414 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 ZMYM6O95789 1325 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 SBNO1A3KN83 1393 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 H0YIN7 160 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 RPN1P04843 607 aaKnown RBP16.25■□□□□ 0.19
LMX1B-201ENST00000355497 OR52Z1P0C646 297 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 NSFP46459 744 aaKnown RBP16.25■□□□□ 0.19
LMX1B-201ENST00000355497 RFX6Q8HWS3 928 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 ADPGKQ9BRR6 497 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 EPS15L1Q9UBC2 864 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 PIK3CAP42336 1068 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 GUCY2DQ02846 1103 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 GCKRQ14397 625 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 CDCA7Q9BWT1 371 aaPredicted RBP16.25■□□□□ 0.19
LMX1B-201ENST00000355497 DRC3Q9H069 523 aa16.25■□□□□ 0.19
LMX1B-201ENST00000355497 NUB1Q9Y5A7 615 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms