RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 PZPP20742 1482 aa19.81■□□□□ 0.76
COL18A1-202ENST00000355480 KCTD2Q14681 263 aa19.81■□□□□ 0.76
COL18A1-202ENST00000355480 CACNA2D3Q8IZS8 1091 aa19.81■□□□□ 0.76
COL18A1-202ENST00000355480 ABCC4O15439 1325 aa19.81■□□□□ 0.76
COL18A1-202ENST00000355480 PTPRTO14522 1441 aa19.81■□□□□ 0.76
COL18A1-202ENST00000355480 LTKP29376 864 aa19.81■□□□□ 0.76
COL18A1-202ENST00000355480 USP28Q96RU2 1077 aa19.81■□□□□ 0.76
COL18A1-202ENST00000355480 KIF11P52732 1056 aa19.81■□□□□ 0.76
COL18A1-202ENST00000355480 CYP4A11Q02928 519 aa19.81■□□□□ 0.76
COL18A1-202ENST00000355480 PPM1KQ8N3J5 372 aa19.81■□□□□ 0.76
COL18A1-202ENST00000355480 KRT12Q99456 494 aa19.81■□□□□ 0.76
COL18A1-202ENST00000355480 PDE8BO95263 885 aa19.8■□□□□ 0.76
COL18A1-202ENST00000355480 RSRC1Q96IZ7 334 aaKnown RBP19.8■□□□□ 0.76
COL18A1-202ENST00000355480 DPP9Q86TI2 863 aa19.8■□□□□ 0.76
COL18A1-202ENST00000355480 CACYBPQ9HB71 228 aaKnown RBP19.8■□□□□ 0.76
COL18A1-202ENST00000355480 SLC39A2Q9NP94 309 aa19.8■□□□□ 0.76
COL18A1-202ENST00000355480 KRT71Q3SY84 523 aa19.8■□□□□ 0.76
COL18A1-202ENST00000355480 SEPT14Q6ZU15 432 aa19.8■□□□□ 0.76
COL18A1-202ENST00000355480 SPICE1Q8N0Z3 855 aa19.8■□□□□ 0.76
COL18A1-202ENST00000355480 P3H4Q92791 437 aa19.8■□□□□ 0.76
COL18A1-202ENST00000355480 TRPC5Q9UL62 973 aaPredicted RBP19.8■□□□□ 0.76
COL18A1-202ENST00000355480 BTBD18B2RXH4 712 aa19.8■□□□□ 0.76
COL18A1-202ENST00000355480 C10orf67Q8IYJ2 551 aa19.8■□□□□ 0.76
COL18A1-202ENST00000355480 LMBRD1Q9NUN5 540 aa19.8■□□□□ 0.76
COL18A1-202ENST00000355480 KCNK3O14649 394 aa19.8■□□□□ 0.76
COL18A1-202ENST00000355480 SEMA3EO15041 775 aa19.8■□□□□ 0.76
COL18A1-202ENST00000355480 CSRNP1Q96S65 589 aa19.8■□□□□ 0.76
COL18A1-202ENST00000355480 RIC8AQ9NPQ8 531 aa19.8■□□□□ 0.76
COL18A1-202ENST00000355480 DDX41Q9UJV9 622 aaKnown RBP19.8■□□□□ 0.76
COL18A1-202ENST00000355480 TPCN1Q9ULQ1 816 aa19.8■□□□□ 0.76
COL18A1-202ENST00000355480 SEPT10Q9P0V9 454 aa19.79■□□□□ 0.76
COL18A1-202ENST00000355480 SAR1BQ9Y6B6 198 aa19.79■□□□□ 0.76
COL18A1-202ENST00000355480 ZNF445P59923 1031 aa19.79■□□□□ 0.76
COL18A1-202ENST00000355480 ADAM9Q13443 819 aa19.79■□□□□ 0.76
COL18A1-202ENST00000355480 KRBA2Q6ZNG9 492 aa19.79■□□□□ 0.76
COL18A1-202ENST00000355480 VCX3BQ9H321 246 aa19.79■□□□□ 0.76
COL18A1-202ENST00000355480 ZNF277Q9NRM2 450 aaPredicted RBP19.79■□□□□ 0.76
COL18A1-202ENST00000355480 ASAP1Q9ULH1 1129 aa19.79■□□□□ 0.76
COL18A1-202ENST00000355480 A6NNZ2 444 aa19.79■□□□□ 0.76
COL18A1-202ENST00000355480 FOSP01100 380 aaPredicted RBP19.79■□□□□ 0.76
COL18A1-202ENST00000355480 TUBB8Q3ZCM7 444 aa19.79■□□□□ 0.76
COL18A1-202ENST00000355480 TRIM58Q8NG06 486 aa19.79■□□□□ 0.76
COL18A1-202ENST00000355480 BRD1O95696 1058 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 POLR2FP61218 127 aaKnown RBP19.78■□□□□ 0.76
COL18A1-202ENST00000355480 UBE3CQ15386 1083 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 PDZD4Q76G19 769 aaPredicted RBP19.78■□□□□ 0.76
COL18A1-202ENST00000355480 APOL6Q9BWW8 343 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 NUF2Q9BZD4 464 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 MIS12Q9H081 205 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 ZNF827Q17R98 1081 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 HAUS1Q96CS2 278 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 RILPQ96NA2 401 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 AMNQ9BXJ7 453 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 RABGAP1Q9Y3P9 1069 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 GTPBP6O43824 516 aaPredicted RBP19.78■□□□□ 0.76
COL18A1-202ENST00000355480 SATB1Q01826 763 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 SF3A3Q12874 501 aaKnown RBP eCLIP19.78■□□□□ 0.763e-7■■■■□ 23.3
COL18A1-202ENST00000355480 FAM26FQ5R3K3 315 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 LEMD3Q9Y2U8 911 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 TRIM37O94972 964 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 GSPT1P15170 499 aaKnown RBP19.78■□□□□ 0.76
COL18A1-202ENST00000355480 ADORA1P30542 326 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 ADCY8P40145 1251 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 PTPROQ16827 1216 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 MGARPQ8TDB4 240 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 POMGNT1Q8WZA1 660 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 RPS6KC1Q96S38 1066 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 PUS3Q9BZE2 481 aaKnown RBP19.78■□□□□ 0.76
COL18A1-202ENST00000355480 METTL14Q9HCE5 456 aaKnown RBP19.78■□□□□ 0.76
COL18A1-202ENST00000355480 ADCY9O60503 1353 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 RPN1P04843 607 aaKnown RBP19.78■□□□□ 0.76
COL18A1-202ENST00000355480 PCP11498 1178 aaKnown RBP19.78■□□□□ 0.76
COL18A1-202ENST00000355480 ARHGAP24Q8N264 748 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 ANKRD42Q8N9B4 389 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 GRK7Q8WTQ7 553 aa19.78■□□□□ 0.76
COL18A1-202ENST00000355480 KRIT1O00522 736 aa19.77■□□□□ 0.76
COL18A1-202ENST00000355480 CCNA1P78396 465 aa19.77■□□□□ 0.76
COL18A1-202ENST00000355480 CCDC17Q96LX7 622 aa19.77■□□□□ 0.76
COL18A1-202ENST00000355480 ZSWIM6Q9HCJ5 1215 aa19.77■□□□□ 0.76
COL18A1-202ENST00000355480 SSH2Q76I76 1423 aa19.77■□□□□ 0.76
COL18A1-202ENST00000355480 PIK3CAP42336 1068 aa19.77■□□□□ 0.76
COL18A1-202ENST00000355480 PLCB4Q15147 1175 aa19.77■□□□□ 0.76
COL18A1-202ENST00000355480 ANKRD20A3Q5VUR7 823 aa19.77■□□□□ 0.76
COL18A1-202ENST00000355480 CLIC6Q96NY7 704 aa19.77■□□□□ 0.76
COL18A1-202ENST00000355480 BUB1O43683 1085 aa19.77■□□□□ 0.76
COL18A1-202ENST00000355480 PTGDRQ13258 359 aa19.77■□□□□ 0.76
COL18A1-202ENST00000355480 TFDP1Q14186 410 aa19.77■□□□□ 0.76
COL18A1-202ENST00000355480 SEPT9Q9UHD8 586 aaPredicted RBP19.77■□□□□ 0.76
COL18A1-202ENST00000355480 PLXNC1O60486 1568 aa19.77■□□□□ 0.76
COL18A1-202ENST00000355480 SYNJ2BP-COX16A0A087WUM0 186 aa19.77■□□□□ 0.75
COL18A1-202ENST00000355480 CMA1P23946 247 aa19.77■□□□□ 0.75
COL18A1-202ENST00000355480 GJA10Q969M2 543 aa19.77■□□□□ 0.75
COL18A1-202ENST00000355480 COX16Q9P0S2 106 aa19.77■□□□□ 0.75
COL18A1-202ENST00000355480 INSRP06213 1382 aa19.77■□□□□ 0.75
COL18A1-202ENST00000355480 VPS41P49754 854 aa19.77■□□□□ 0.75
COL18A1-202ENST00000355480 NME8Q8N427 588 aa19.77■□□□□ 0.75
COL18A1-202ENST00000355480 CABS1Q96KC9 395 aa19.77■□□□□ 0.75
COL18A1-202ENST00000355480 PCK1P35558 622 aa19.76■□□□□ 0.75
COL18A1-202ENST00000355480 UBXN2AP68543 259 aa19.76■□□□□ 0.75
COL18A1-202ENST00000355480 MAP7Q14244 749 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms