RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 SCAF8Q9UPN6 1271 aaKnown RBP20.46■□□□□ 0.87
APP-203ENST00000354192 GPR75-ASB3A0A0A6YYF3 556 aa20.45■□□□□ 0.86
APP-203ENST00000354192 KCNJ18B7U540 433 aa20.45■□□□□ 0.86
APP-203ENST00000354192 TDP2O95551 362 aa20.45■□□□□ 0.86
APP-203ENST00000354192 FCER1AP12319 257 aa20.45■□□□□ 0.86
APP-203ENST00000354192 KCNJ12Q14500 433 aa20.45■□□□□ 0.86
APP-203ENST00000354192 KMT5BQ4FZB7 885 aa20.45■□□□□ 0.86
APP-203ENST00000354192 PUF60Q9UHX1 559 aaKnown RBP20.45■□□□□ 0.86
APP-203ENST00000354192 GTPBP6O43824 516 aaPredicted RBP20.45■□□□□ 0.86
APP-203ENST00000354192 FAM170AA1A519 330 aa20.44■□□□□ 0.86
APP-203ENST00000354192 GDF11O95390 407 aa20.44■□□□□ 0.86
APP-203ENST00000354192 PLCG2P16885 1265 aa20.44■□□□□ 0.86
APP-203ENST00000354192 ERCC5P28715 1186 aaPredicted RBP20.44■□□□□ 0.86
APP-203ENST00000354192 CACNB1Q02641 598 aaPredicted RBP20.44■□□□□ 0.86
APP-203ENST00000354192 SLF1Q9BQI6 1058 aa20.44■□□□□ 0.86
APP-203ENST00000354192 CTIFO43310 598 aaKnown RBP20.44■□□□□ 0.86
APP-203ENST00000354192 PDXDC2PQ6P474 469 aa20.44■□□□□ 0.86
APP-203ENST00000354192 MRPL44Q9H9J2 332 aaKnown RBP20.44■□□□□ 0.86
APP-203ENST00000354192 PALM3A6NDB9 673 aaPredicted RBP20.44■□□□□ 0.86
APP-203ENST00000354192 POLRMTO00411 1230 aaKnown RBP20.44■□□□□ 0.86
APP-203ENST00000354192 NR1I3Q14994 352 aa20.44■□□□□ 0.86
APP-203ENST00000354192 FBXO38Q6PIJ6 1188 aa20.44■□□□□ 0.86
APP-203ENST00000354192 SLF2Q8IX21 1173 aa20.44■□□□□ 0.86
APP-203ENST00000354192 ZFP91Q96JP5 570 aaPredicted RBP20.44■□□□□ 0.86
APP-203ENST00000354192 PSDA5PKW4 1024 aaPredicted RBP20.43■□□□□ 0.86
APP-203ENST00000354192 KRT9P35527 623 aa20.43■□□□□ 0.86
APP-203ENST00000354192 USH1GQ495M9 461 aa20.43■□□□□ 0.86
APP-203ENST00000354192 C16orf86Q6ZW13 317 aa20.43■□□□□ 0.86
APP-203ENST00000354192 TRMT1LQ7Z2T5 733 aaKnown RBP20.43■□□□□ 0.86
APP-203ENST00000354192 SPICE1Q8N0Z3 855 aa20.43■□□□□ 0.86
APP-203ENST00000354192 NEDD1Q8NHV4 660 aa20.43■□□□□ 0.86
APP-203ENST00000354192 MAGEC2Q9UBF1 373 aaPredicted RBP20.43■□□□□ 0.86
APP-203ENST00000354192 SERPINB13Q9UIV8 391 aa20.43■□□□□ 0.86
APP-203ENST00000354192 OR52Z1P0C646 297 aa20.43■□□□□ 0.86
APP-203ENST00000354192 GNA11P29992 359 aa20.43■□□□□ 0.86
APP-203ENST00000354192 CHRNA5P30532 468 aa20.43■□□□□ 0.86
APP-203ENST00000354192 PPP4CP60510 307 aa20.43■□□□□ 0.86
APP-203ENST00000354192 LRRC41Q15345 812 aa20.43■□□□□ 0.86
APP-203ENST00000354192 E2F4Q16254 413 aa20.43■□□□□ 0.86
APP-203ENST00000354192 NT5DC1Q5TFE4 455 aa20.43■□□□□ 0.86
APP-203ENST00000354192 NEK8Q86SG6 692 aa20.43■□□□□ 0.86
APP-203ENST00000354192 NID2Q14112 1375 aa20.42■□□□□ 0.86
APP-203ENST00000354192 RNF225M0QZC1 329 aaPredicted RBP20.42■□□□□ 0.86
APP-203ENST00000354192 LONP1P36776 959 aaKnown RBP20.42■□□□□ 0.86
APP-203ENST00000354192 ENOX2Q16206 610 aaKnown RBP20.42■□□□□ 0.86
APP-203ENST00000354192 RAD9BQ6WBX8 426 aa20.42■□□□□ 0.86
APP-203ENST00000354192 REXO1L1PQ8IX06 675 aa20.42■□□□□ 0.86
APP-203ENST00000354192 EXOC1Q9NV70 894 aa20.42■□□□□ 0.86
APP-203ENST00000354192 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.42■□□□□ 0.868e-12■□□□□ 8.1
APP-203ENST00000354192 USP17L15C9J2P7 530 aa20.42■□□□□ 0.86
APP-203ENST00000354192 USP17L13C9JLJ4 530 aa20.42■□□□□ 0.86
APP-203ENST00000354192 USP17L11C9JVI0 530 aa20.42■□□□□ 0.86
APP-203ENST00000354192 USP17L18D6R9N7 530 aa20.42■□□□□ 0.86
APP-203ENST00000354192 USP17L22D6RA61 530 aa20.42■□□□□ 0.86
APP-203ENST00000354192 USP17L17D6RBQ6 530 aa20.42■□□□□ 0.86
APP-203ENST00000354192 USP17L19D6RCP7 530 aa20.42■□□□□ 0.86
APP-203ENST00000354192 USP17L20D6RJB6 530 aa20.42■□□□□ 0.86
APP-203ENST00000354192 ABL1P00519 1130 aa20.42■□□□□ 0.86
APP-203ENST00000354192 TRAPPC10P48553 1259 aa20.42■□□□□ 0.86
APP-203ENST00000354192 USP17L24Q0WX57 530 aa20.42■□□□□ 0.86
APP-203ENST00000354192 ZNF569Q5MCW4 686 aa20.42■□□□□ 0.86
APP-203ENST00000354192 USP17L6PQ6QN14 398 aa20.42■□□□□ 0.86
APP-203ENST00000354192 PROM2Q8N271 834 aa20.42■□□□□ 0.86
APP-203ENST00000354192 USP17L10C9JJH3 530 aa20.42■□□□□ 0.86
APP-203ENST00000354192 MTIF2P46199 727 aaKnown RBP20.42■□□□□ 0.86
APP-203ENST00000354192 COL23A1Q86Y22 540 aaPredicted RBP20.42■□□□□ 0.86
APP-203ENST00000354192 CSGALNACT2Q8N6G5 542 aa20.42■□□□□ 0.86
APP-203ENST00000354192 PDHBP11177 359 aa20.41■□□□□ 0.86
APP-203ENST00000354192 COPB1P53618 953 aaKnown RBP20.41■□□□□ 0.86
APP-203ENST00000354192 STIM1Q13586 685 aa20.41■□□□□ 0.86
APP-203ENST00000354192 MCM6Q14566 821 aa20.41■□□□□ 0.86
APP-203ENST00000354192 ZMYND15Q9H091 742 aa20.41■□□□□ 0.86
APP-203ENST00000354192 ADD3Q9UEY8 706 aaKnown RBP20.41■□□□□ 0.86
APP-203ENST00000354192 LRWD1Q9UFC0 647 aa20.41■□□□□ 0.86
APP-203ENST00000354192 KIF2AO00139 706 aaPredicted RBP20.41■□□□□ 0.86
APP-203ENST00000354192 FANCGO15287 622 aa20.41■□□□□ 0.86
APP-203ENST00000354192 ZYXQ15942 572 aaKnown RBP20.41■□□□□ 0.86
APP-203ENST00000354192 NAALADL2Q58DX5 795 aa20.41■□□□□ 0.86
APP-203ENST00000354192 SH3RF1Q7Z6J0 888 aa20.41■□□□□ 0.86
APP-203ENST00000354192 LRRC15Q8TF66 581 aa20.41■□□□□ 0.86
APP-203ENST00000354192 TBC1D22AQ8WUA7 517 aa20.41■□□□□ 0.86
APP-203ENST00000354192 A0A1B0GTH6 734 aa20.4■□□□□ 0.86
APP-203ENST00000354192 B4DLN1 442 aa20.4■□□□□ 0.86
APP-203ENST00000354192 CCDC175P0C221 793 aa20.4■□□□□ 0.86
APP-203ENST00000354192 CALCRLQ16602 461 aa20.4■□□□□ 0.86
APP-203ENST00000354192 KIF4BQ2VIQ3 1234 aa20.4■□□□□ 0.86
APP-203ENST00000354192 ERO1AQ96HE7 468 aa20.4■□□□□ 0.86
APP-203ENST00000354192 GUCA1BQ9UMX6 200 aa20.4■□□□□ 0.86
APP-203ENST00000354192 PARP3Q9Y6F1 533 aa20.4■□□□□ 0.86
APP-203ENST00000354192 PSMA7O14818 248 aa20.4■□□□□ 0.86
APP-203ENST00000354192 KLK7P49862 253 aa20.4■□□□□ 0.86
APP-203ENST00000354192 TANGO6Q9C0B7 1094 aa20.4■□□□□ 0.86
APP-203ENST00000354192 MTMR4Q9NYA4 1195 aa20.4■□□□□ 0.86
APP-203ENST00000354192 DOCK2Q92608 1830 aa20.4■□□□□ 0.86
APP-203ENST00000354192 SLC37A4O43826 429 aa20.4■□□□□ 0.86
APP-203ENST00000354192 STK4Q13043 487 aa20.4■□□□□ 0.86
APP-203ENST00000354192 ZNF658Q5TYW1 1059 aaPredicted RBP20.4■□□□□ 0.86
APP-203ENST00000354192 C4orf32Q8N8J7 132 aa20.4■□□□□ 0.86
APP-203ENST00000354192 CALML4Q96GE6 196 aa20.4■□□□□ 0.86
APP-203ENST00000354192 IRS2Q9Y4H2 1338 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms