RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 BMP2KQ9NSY1 1161 aaPredicted RBP11.71□□□□□ -0.54
SMPD4-201ENST00000351288 DAGLAQ9Y4D2 1042 aa11.71□□□□□ -0.54
SMPD4-201ENST00000351288 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.71□□□□□ -0.54
SMPD4-201ENST00000351288 CHD4Q14839 1912 aa11.71□□□□□ -0.54
SMPD4-201ENST00000351288 DDAH1O94760 285 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 CASP14P31944 242 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 NONOQ15233 471 aaKnown RBP eCLIP11.7□□□□□ -0.54
SMPD4-201ENST00000351288 NPY5RQ15761 445 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 SLC10A5Q5PT55 438 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 KANK3Q6NY19 840 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 TRIM65Q6PJ69 517 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 HINFPQ9BQA5 517 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 ZNF446Q9NWS9 450 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 CGNQ9P2M7 1197 aaKnown RBP11.7□□□□□ -0.54
SMPD4-201ENST00000351288 BCS1LQ9Y276 419 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 ROBO1Q9Y6N7 1651 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 SPATA31A6Q5VVP1 1343 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 SYNRGQ9UMZ2 1314 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 ABCA3Q99758 1704 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 PRPF3O43395 683 aaKnown RBP11.7□□□□□ -0.54
SMPD4-201ENST00000351288 CERKLQ49MI3 558 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-201ENST00000351288 UBXN4Q92575 508 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 HPS3Q969F9 1004 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 ERO1AQ96HE7 468 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 EXOC1Q9NV70 894 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 MYH6P13533 1939 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 RNF225M0QZC1 329 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-201ENST00000351288 POLR3GO15318 223 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-201ENST00000351288 CFBP00751 764 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 TAL1P17542 331 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-201ENST00000351288 PLS1Q14651 629 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 ACRBPQ8NEB7 543 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 MTRQ99707 1265 aa11.7□□□□□ -0.54
SMPD4-201ENST00000351288 ZNF277Q9NRM2 450 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-201ENST00000351288 ECM29Q5VYK3 1845 aa11.69□□□□□ -0.54
SMPD4-201ENST00000351288 EZH2Q15910 746 aaKnown RBP11.69□□□□□ -0.54
SMPD4-201ENST00000351288 MAEAQ7L5Y9 396 aa11.69□□□□□ -0.54
SMPD4-201ENST00000351288 TMEM139Q8IV31 216 aa11.69□□□□□ -0.54
SMPD4-201ENST00000351288 TBCKQ8TEA7 893 aa11.69□□□□□ -0.54
SMPD4-201ENST00000351288 CSRNP1Q96S65 589 aa11.69□□□□□ -0.54
SMPD4-201ENST00000351288 CNTNAP5Q8WYK1 1306 aa11.69□□□□□ -0.54
SMPD4-201ENST00000351288 DDX39AO00148 427 aaKnown RBP11.69□□□□□ -0.54
SMPD4-201ENST00000351288 ARID5AQ03989 594 aa11.69□□□□□ -0.54
SMPD4-201ENST00000351288 PDE4DQ08499 809 aa11.69□□□□□ -0.54
SMPD4-201ENST00000351288 MLKLQ8NB16 471 aa11.69□□□□□ -0.54
SMPD4-201ENST00000351288 KIFC2Q96AC6 838 aa11.69□□□□□ -0.54
SMPD4-201ENST00000351288 TMEM60Q9H2L4 133 aa11.69□□□□□ -0.54
SMPD4-201ENST00000351288 IL17RBQ9NRM6 502 aa11.69□□□□□ -0.54
SMPD4-201ENST00000351288 SAMM50Q9Y512 469 aa11.69□□□□□ -0.54
SMPD4-201ENST00000351288 FLT1P17948 1338 aa11.69□□□□□ -0.54
SMPD4-201ENST00000351288 FXR1P51114 621 aaKnown RBP eCLIP11.68□□□□□ -0.54
SMPD4-201ENST00000351288 CLCN6P51797 869 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 TCERG1LQ5VWI1 586 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 WWC2Q6AWC2 1192 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 RAD9BQ6WBX8 426 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 ZNF397Q8NF99 534 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-201ENST00000351288 LRWD1Q9UFC0 647 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 PRDM4Q9UKN5 801 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 USP17L15C9J2P7 530 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 USP17L13C9JLJ4 530 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 USP17L11C9JVI0 530 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 USP17L18D6R9N7 530 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 USP17L22D6RA61 530 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 USP17L17D6RBQ6 530 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 USP17L19D6RCP7 530 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 USP17L20D6RJB6 530 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 NPR1P16066 1061 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 RASA1P20936 1047 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 CRKP46108 304 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 SARSP49591 514 aaKnown RBP11.68□□□□□ -0.54
SMPD4-201ENST00000351288 USP17L24Q0WX57 530 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 RCSD1Q6JBY9 416 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 USP17L6PQ6QN14 398 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 CICQ96RK0 1608 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-201ENST00000351288 PSDA5PKW4 1024 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-201ENST00000351288 SORBS3O60504 671 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 SLFN14P0C7P3 912 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 ZNF18P17022 549 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 CASQ1P31415 396 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 ADCY7P51828 1080 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 UBXN1Q04323 297 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 ICA1Q05084 483 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 SEPT2Q15019 361 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 DLGAP5Q15398 846 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 NELFCDQ8IXH7 590 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 SNX29Q8TEQ0 813 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 DEF6Q9H4E7 631 aa11.68□□□□□ -0.54
SMPD4-201ENST00000351288 BMP15O95972 392 aa11.67□□□□□ -0.54
SMPD4-201ENST00000351288 CYP4A11Q02928 519 aa11.67□□□□□ -0.54
SMPD4-201ENST00000351288 TBC1D10BQ4KMP7 808 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-201ENST00000351288 WDR78Q5VTH9 848 aa11.67□□□□□ -0.54
SMPD4-201ENST00000351288 CABP7Q86V35 215 aa11.67□□□□□ -0.54
SMPD4-201ENST00000351288 SMAP1Q8IYB5 467 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-201ENST00000351288 ENOX1Q8TC92 643 aaKnown RBP11.67□□□□□ -0.54
SMPD4-201ENST00000351288 JDP2Q8WYK2 163 aa11.67□□□□□ -0.54
SMPD4-201ENST00000351288 ZCCHC17Q9NP64 241 aaKnown RBP11.67□□□□□ -0.54
SMPD4-201ENST00000351288 DDX41Q9UJV9 622 aaKnown RBP11.67□□□□□ -0.54
SMPD4-201ENST00000351288 HOXA13P31271 388 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-201ENST00000351288 PPP2R5BQ15173 497 aa11.67□□□□□ -0.54
SMPD4-201ENST00000351288 KRT79Q5XKE5 535 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms