RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 GOLGA6L22H0YM25 854 aa9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 KIF20AO95235 890 aa9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 CST3P01034 146 aaPredicted RBP9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 PGRP06401 933 aa9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 UQCRHP07919 91 aa9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 GJA8P48165 433 aa9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 NASPP49321 788 aaPredicted RBP9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 ETF1P62495 437 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 CWF19L2Q2TBE0 894 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 SLC6A19Q695T7 634 aa9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 SASS6Q6UVJ0 657 aa9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 CCDC94Q9BW85 323 aaPredicted RBP9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 FOXQ1Q9C009 403 aa9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 BRMS1Q9HCU9 246 aa9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 YTHDC2Q9H6S0 1430 aaKnown RBP9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 PLEKHG1Q9ULL1 1385 aa9.38□□□□□ -0.91
UBE2D3-204ENST00000349311 LETM1O95202 739 aaPredicted RBP9.38□□□□□ -0.91
UBE2D3-204ENST00000349311 IGHDP01880 384 aa9.38□□□□□ -0.91
UBE2D3-204ENST00000349311 CDC37L1Q7L3B6 337 aa9.38□□□□□ -0.91
UBE2D3-204ENST00000349311 ARMCX6Q7L4S7 300 aa9.38□□□□□ -0.91
UBE2D3-204ENST00000349311 MFSD2AQ8NA29 543 aa9.38□□□□□ -0.91
UBE2D3-204ENST00000349311 SNX21Q969T3 373 aa9.38□□□□□ -0.91
UBE2D3-204ENST00000349311 TMEM87BQ96K49 555 aa9.38□□□□□ -0.91
UBE2D3-204ENST00000349311 METTL22Q9BUU2 404 aaPredicted RBP9.38□□□□□ -0.91
UBE2D3-204ENST00000349311 SSU72Q9NP77 194 aaKnown RBP9.38□□□□□ -0.91
UBE2D3-204ENST00000349311 PICK1Q9NRD5 415 aa9.38□□□□□ -0.91
UBE2D3-204ENST00000349311 R3HCC1Q9Y3T6 440 aaKnown RBP9.38□□□□□ -0.91
UBE2D3-204ENST00000349311 CHD2O14647 1828 aaKnown RBP9.38□□□□□ -0.91
UBE2D3-204ENST00000349311 TLR3O15455 904 aaKnown RBP9.37□□□□□ -0.91
UBE2D3-204ENST00000349311 LEFTY1O75610 366 aa9.37□□□□□ -0.91
UBE2D3-204ENST00000349311 HTR3BO95264 441 aa9.37□□□□□ -0.91
UBE2D3-204ENST00000349311 CANXP27824 592 aaKnown RBP9.37□□□□□ -0.91
UBE2D3-204ENST00000349311 CYP27A1Q02318 531 aa9.37□□□□□ -0.91
UBE2D3-204ENST00000349311 APOBRQ0VD83 1088 aa9.37□□□□□ -0.91
UBE2D3-204ENST00000349311 ZNF765Q7L2R6 523 aa9.37□□□□□ -0.91
UBE2D3-204ENST00000349311 FBXL6Q8N531 539 aa9.37□□□□□ -0.91
UBE2D3-204ENST00000349311 GIMAP7Q8NHV1 300 aa9.37□□□□□ -0.91
UBE2D3-204ENST00000349311 NKD1Q969G9 470 aa9.37□□□□□ -0.91
UBE2D3-204ENST00000349311 C22orf23Q9BZE7 217 aa9.37□□□□□ -0.91
UBE2D3-204ENST00000349311 PRDM10Q9NQV6 1147 aa9.37□□□□□ -0.91
UBE2D3-204ENST00000349311 ADGRB2O60241 1585 aa9.37□□□□□ -0.91
UBE2D3-204ENST00000349311 ABCC11Q96J66 1382 aa9.37□□□□□ -0.91
UBE2D3-204ENST00000349311 NPC1L1Q9UHC9 1359 aa9.37□□□□□ -0.91
UBE2D3-204ENST00000349311 ANKRD26Q9UPS8 1709 aa9.36□□□□□ -0.91
UBE2D3-204ENST00000349311 TULP4Q9NRJ4 1543 aa9.36□□□□□ -0.91
UBE2D3-204ENST00000349311 DNAJA2O60884 412 aa9.36□□□□□ -0.91
UBE2D3-204ENST00000349311 SLITRK5O94991 958 aa9.36□□□□□ -0.91
UBE2D3-204ENST00000349311 EOMESO95936 686 aa9.36□□□□□ -0.91
UBE2D3-204ENST00000349311 TGFB1P01137 390 aa9.36□□□□□ -0.91
UBE2D3-204ENST00000349311 FAM87AP0C7U9 286 aa9.36□□□□□ -0.91
UBE2D3-204ENST00000349311 PLCG1P19174 1290 aa9.36□□□□□ -0.91
UBE2D3-204ENST00000349311 PAK2Q13177 524 aa9.36□□□□□ -0.91
UBE2D3-204ENST00000349311 SMC5Q8IY18 1101 aa9.36□□□□□ -0.91
UBE2D3-204ENST00000349311 SLFN12Q8IYM2 578 aa9.36□□□□□ -0.91
UBE2D3-204ENST00000349311 RWDD1Q9H446 243 aaPredicted RBP9.36□□□□□ -0.91
UBE2D3-204ENST00000349311 REV1Q9UBZ9 1251 aa9.36□□□□□ -0.91
UBE2D3-204ENST00000349311 NOL7Q9UMY1 257 aaKnown RBP9.36□□□□□ -0.91
UBE2D3-204ENST00000349311 FAM135BQ49AJ0 1406 aa9.36□□□□□ -0.91
UBE2D3-204ENST00000349311 XRN1Q8IZH2 1706 aaKnown RBP9.36□□□□□ -0.91
UBE2D3-204ENST00000349311 GRIN3BO60391 1043 aa9.35□□□□□ -0.91
UBE2D3-204ENST00000349311 DDIT3P35638 169 aa9.35□□□□□ -0.91
UBE2D3-204ENST00000349311 RAB3GAP1Q15042 981 aa9.35□□□□□ -0.91
UBE2D3-204ENST00000349311 SEZ6Q53EL9 994 aa9.35□□□□□ -0.91
UBE2D3-204ENST00000349311 PRAMEF13Q5VWM6 474 aa9.35□□□□□ -0.91
UBE2D3-204ENST00000349311 ADAMTS13Q76LX8 1427 aa9.35□□□□□ -0.91
UBE2D3-204ENST00000349311 HEXIM2Q96MH2 286 aaKnown RBP9.35□□□□□ -0.91
UBE2D3-204ENST00000349311 PIM2Q9P1W9 311 aa9.35□□□□□ -0.91
UBE2D3-204ENST00000349311 CCDC39Q9UFE4 941 aa9.35□□□□□ -0.91
UBE2D3-204ENST00000349311 CD97P48960 835 aa9.34□□□□□ -0.91
UBE2D3-204ENST00000349311 ZNF445P59923 1031 aa9.34□□□□□ -0.91
UBE2D3-204ENST00000349311 CLCQ05315 142 aa9.34□□□□□ -0.91
UBE2D3-204ENST00000349311 CYP27C1Q4G0S4 372 aa9.34□□□□□ -0.91
UBE2D3-204ENST00000349311 GAS2L3Q86XJ1 694 aa9.34□□□□□ -0.91
UBE2D3-204ENST00000349311 THEMISQ8N1K5 641 aaPredicted RBP9.34□□□□□ -0.91
UBE2D3-204ENST00000349311 TOP6BLQ8N6T0 577 aa9.34□□□□□ -0.91
UBE2D3-204ENST00000349311 TNPO1Q92973 898 aaKnown RBP9.34□□□□□ -0.91
UBE2D3-204ENST00000349311 OSBPL1AQ9BXW6 950 aa9.34□□□□□ -0.91
UBE2D3-204ENST00000349311 ACBD3Q9H3P7 528 aa9.34□□□□□ -0.91
UBE2D3-204ENST00000349311 ATG3Q9NT62 314 aa9.34□□□□□ -0.91
UBE2D3-204ENST00000349311 PCDHB14Q9Y5E9 798 aa9.34□□□□□ -0.91
UBE2D3-204ENST00000349311 AKAP12Q02952 1782 aa9.34□□□□□ -0.91
UBE2D3-204ENST00000349311 KIAA1324LA8MWY0 1029 aaPredicted RBP9.33□□□□□ -0.92
UBE2D3-204ENST00000349311 UPK3BL1B0FP48 263 aa9.33□□□□□ -0.92
UBE2D3-204ENST00000349311 UPK3BL2E5RIL1 263 aa9.33□□□□□ -0.92
UBE2D3-204ENST00000349311 IGF2BP3O00425 579 aaKnown RBP eCLIP9.33□□□□□ -0.92
UBE2D3-204ENST00000349311 MED26O95402 600 aa9.33□□□□□ -0.92
UBE2D3-204ENST00000349311 HSP90AB1P08238 724 aaKnown RBP9.33□□□□□ -0.92
UBE2D3-204ENST00000349311 FOSL1P15407 271 aa9.33□□□□□ -0.92
UBE2D3-204ENST00000349311 SOX9P48436 509 aa9.33□□□□□ -0.92
UBE2D3-204ENST00000349311 KLHL40Q2TBA0 621 aa9.33□□□□□ -0.92
UBE2D3-204ENST00000349311 CC2D1BQ5T0F9 858 aaKnown RBP9.33□□□□□ -0.92
UBE2D3-204ENST00000349311 CLEC17AQ6ZS10 378 aa9.33□□□□□ -0.92
UBE2D3-204ENST00000349311 RIN3Q8TB24 985 aa9.33□□□□□ -0.92
UBE2D3-204ENST00000349311 PPP1R13LQ8WUF5 828 aa9.33□□□□□ -0.92
UBE2D3-204ENST00000349311 SPATA32Q96LK8 384 aa9.33□□□□□ -0.92
UBE2D3-204ENST00000349311 MKNK2Q9HBH9 465 aa9.33□□□□□ -0.92
UBE2D3-204ENST00000349311 ZKSCAN5Q9Y2L8 839 aa9.33□□□□□ -0.92
UBE2D3-204ENST00000349311 PIK3R4Q99570 1358 aa9.33□□□□□ -0.92
UBE2D3-204ENST00000349311 ITSN1Q15811 1721 aa9.33□□□□□ -0.92
UBE2D3-204ENST00000349311 CNTNAP4Q9C0A0 1308 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms