RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 LUC7L2Q9Y383 392 aaKnown RBP20.33■□□□□ 0.85
PTP4A3-202ENST00000349124 RCCD1A6NED2 376 aa20.33■□□□□ 0.84
PTP4A3-202ENST00000349124 HERVK_113P62684 666 aa20.33■□□□□ 0.84
PTP4A3-202ENST00000349124 AMIGO3Q86WK7 504 aa20.33■□□□□ 0.84
PTP4A3-202ENST00000349124 TGFBRAP1Q8WUH2 860 aa20.33■□□□□ 0.84
PTP4A3-202ENST00000349124 MKRN1Q9UHC7 482 aaKnown RBP20.33■□□□□ 0.84
PTP4A3-202ENST00000349124 DUSP10Q9Y6W6 482 aa20.33■□□□□ 0.84
PTP4A3-202ENST00000349124 MYH8P13535 1937 aa20.32■□□□□ 0.84
PTP4A3-202ENST00000349124 LGALS16A8MUM7 142 aa20.32■□□□□ 0.84
PTP4A3-202ENST00000349124 NBPF5PQ86XG9 351 aaPredicted RBP20.32■□□□□ 0.84
PTP4A3-202ENST00000349124 DUSP9Q99956 384 aaKnown RBP20.32■□□□□ 0.84
PTP4A3-202ENST00000349124 HINFPQ9BQA5 517 aa20.32■□□□□ 0.84
PTP4A3-202ENST00000349124 VAT1LQ9HCJ6 419 aa20.32■□□□□ 0.84
PTP4A3-202ENST00000349124 ATP1A1P05023 1023 aaKnown RBP20.31■□□□□ 0.84
PTP4A3-202ENST00000349124 FCER1AP12319 257 aa20.31■□□□□ 0.84
PTP4A3-202ENST00000349124 STK4Q13043 487 aa20.31■□□□□ 0.84
PTP4A3-202ENST00000349124 SLC10A5Q5PT55 438 aa20.31■□□□□ 0.84
PTP4A3-202ENST00000349124 TTI2Q6NXR4 508 aa20.31■□□□□ 0.84
PTP4A3-202ENST00000349124 DGKHQ86XP1 1220 aa20.31■□□□□ 0.84
PTP4A3-202ENST00000349124 LACRTQ9GZZ8 138 aa20.31■□□□□ 0.84
PTP4A3-202ENST00000349124 PHLPP1O60346 1717 aa20.31■□□□□ 0.84
PTP4A3-202ENST00000349124 STXBP3O00186 592 aa20.31■□□□□ 0.84
PTP4A3-202ENST00000349124 PHACTR2O75167 634 aa20.31■□□□□ 0.84
PTP4A3-202ENST00000349124 PLCG1P19174 1290 aa20.31■□□□□ 0.84
PTP4A3-202ENST00000349124 TXNRD1Q16881 649 aa20.31■□□□□ 0.84
PTP4A3-202ENST00000349124 CAPZA3Q96KX2 299 aa20.31■□□□□ 0.84
PTP4A3-202ENST00000349124 KBTBD4Q9NVX7 518 aa20.31■□□□□ 0.84
PTP4A3-202ENST00000349124 STRCQ7RTU9 1775 aa20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 TSPY3P0CV98 308 aa20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 TSPY8P0CW00 308 aa20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 CYP27A1Q02318 531 aa20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 LETM2Q2VYF4 491 aa20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 TAF3Q5VWG9 929 aa20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 ANKRD40Q6AI12 368 aa20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 MAPKAPK5Q8IW41 473 aa20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 TMEM47Q9BQJ4 181 aa20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 PYM1Q9BRP8 204 aaKnown RBP20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 VPS18Q9P253 973 aa20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 ERCC3P19447 782 aa20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 LMAN1P49257 510 aa20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 FAM193AP78312 1265 aa20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 GRM4Q14833 912 aa20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 CSGALNACT2Q8N6G5 542 aa20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 HNRNPLLQ8WVV9 542 aaKnown RBP20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 SETDB2Q96T68 719 aa20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 MMS19Q96T76 1030 aa20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 TUBGCP2Q9BSJ2 902 aa20.3■□□□□ 0.84
PTP4A3-202ENST00000349124 ZMYND10O75800 440 aa20.29■□□□□ 0.84
PTP4A3-202ENST00000349124 TM4SF1P30408 202 aa20.29■□□□□ 0.84
PTP4A3-202ENST00000349124 CCDC178Q5BJE1 867 aa20.29■□□□□ 0.84
PTP4A3-202ENST00000349124 CCDC122Q5T0U0 273 aa20.29■□□□□ 0.84
PTP4A3-202ENST00000349124 GIMAP8Q8ND71 665 aaPredicted RBP20.29■□□□□ 0.84
PTP4A3-202ENST00000349124 TRIM14Q14142 442 aa20.29■□□□□ 0.84
PTP4A3-202ENST00000349124 WHAMMP3Q1A5X7 153 aa20.29■□□□□ 0.84
PTP4A3-202ENST00000349124 HDXQ7Z353 690 aa20.29■□□□□ 0.84
PTP4A3-202ENST00000349124 GDAP1L1Q96MZ0 367 aa20.29■□□□□ 0.84
PTP4A3-202ENST00000349124 DNAJC7Q99615 494 aa20.29■□□□□ 0.84
PTP4A3-202ENST00000349124 BARHL2Q9NY43 387 aa20.29■□□□□ 0.84
PTP4A3-202ENST00000349124 CALCOCO1Q9P1Z2 691 aa20.29■□□□□ 0.84
PTP4A3-202ENST00000349124 CAPN11Q9UMQ6 739 aa20.29■□□□□ 0.84
PTP4A3-202ENST00000349124 PSMA7O14818 248 aa20.28■□□□□ 0.84
PTP4A3-202ENST00000349124 RHOBTB3O94955 611 aa20.28■□□□□ 0.84
PTP4A3-202ENST00000349124 TECP42680 631 aa20.28■□□□□ 0.84
PTP4A3-202ENST00000349124 USP17L2Q6R6M4 530 aa20.28■□□□□ 0.84
PTP4A3-202ENST00000349124 ZNF444Q8N0Y2 327 aaPredicted RBP20.28■□□□□ 0.84
PTP4A3-202ENST00000349124 CDCA7Q9BWT1 371 aaPredicted RBP20.28■□□□□ 0.84
PTP4A3-202ENST00000349124 LRRIQ3A6PVS8 624 aaPredicted RBP20.28■□□□□ 0.84
PTP4A3-202ENST00000349124 KLRF2D3W0D1 207 aa20.28■□□□□ 0.84
PTP4A3-202ENST00000349124 ZNF185O15231 689 aa20.28■□□□□ 0.84
PTP4A3-202ENST00000349124 CCNT1O60563 726 aaKnown RBP20.28■□□□□ 0.84
PTP4A3-202ENST00000349124 TBC1D8BQ0IIM8 1120 aa20.28■□□□□ 0.84
PTP4A3-202ENST00000349124 SH3GLB2Q9NR46 395 aa20.28■□□□□ 0.84
PTP4A3-202ENST00000349124 LDHBP07195 334 aaKnown RBP20.27■□□□□ 0.84
PTP4A3-202ENST00000349124 PIP4K2BP78356 416 aa20.27■□□□□ 0.84
PTP4A3-202ENST00000349124 PDE4DQ08499 809 aa20.27■□□□□ 0.84
PTP4A3-202ENST00000349124 CASP8Q14790 479 aa20.27■□□□□ 0.84
PTP4A3-202ENST00000349124 CABP7Q86V35 215 aa20.27■□□□□ 0.84
PTP4A3-202ENST00000349124 ANKIB1Q9P2G1 1089 aa20.27■□□□□ 0.84
PTP4A3-202ENST00000349124 FAN1Q9Y2M0 1017 aa20.27■□□□□ 0.84
PTP4A3-202ENST00000349124 PDS5AQ29RF7 1337 aaKnown RBP20.27■□□□□ 0.84
PTP4A3-202ENST00000349124 TRIM21P19474 475 aaKnown RBP20.27■□□□□ 0.84
PTP4A3-202ENST00000349124 KCNB1Q14721 858 aa20.27■□□□□ 0.84
PTP4A3-202ENST00000349124 NFIXQ14938 502 aa20.27■□□□□ 0.84
PTP4A3-202ENST00000349124 TRAPPC11Q7Z392 1133 aa20.27■□□□□ 0.84
PTP4A3-202ENST00000349124 PCMTD1Q96MG8 357 aaPredicted RBP20.27■□□□□ 0.84
PTP4A3-202ENST00000349124 CCSER1Q9C0I3 900 aa20.27■□□□□ 0.84
PTP4A3-202ENST00000349124 MAGEC2Q9UBF1 373 aaPredicted RBP20.27■□□□□ 0.84
PTP4A3-202ENST00000349124 FLT1P17948 1338 aa20.27■□□□□ 0.83
PTP4A3-202ENST00000349124 PLEKP08567 350 aaPredicted RBP20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 KRT26Q7Z3Y9 468 aa20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 SMARCC1Q92922 1105 aaPredicted RBP20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 ANKRD2Q9GZV1 360 aa20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 THAP9Q9H5L6 903 aa20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 PALM3A6NDB9 673 aaPredicted RBP20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 SRGNP10124 158 aa20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 EEF1GP26641 437 aaKnown RBP20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 ASIC1P78348 528 aa20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 TRIM9Q9C026 710 aa20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 UBA5Q9GZZ9 404 aa20.26■□□□□ 0.83
PTP4A3-202ENST00000349124 MYO1AQ9UBC5 1043 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms