RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 WNT7AO00755 349 aa20.85■□□□□ 0.93
SCARF1-202ENST00000348987 KIF1CO43896 1103 aaKnown RBP20.85■□□□□ 0.93
SCARF1-202ENST00000348987 CAMTA2O94983 1202 aa20.85■□□□□ 0.93
SCARF1-202ENST00000348987 EZH2Q15910 746 aaKnown RBP20.85■□□□□ 0.93
SCARF1-202ENST00000348987 WASF1Q92558 559 aa20.85■□□□□ 0.93
SCARF1-202ENST00000348987 FOXP1Q9H334 677 aaPredicted RBP20.85■□□□□ 0.93
SCARF1-202ENST00000348987 VPS54Q9P1Q0 977 aa20.85■□□□□ 0.93
SCARF1-202ENST00000348987 LIMA1Q9UHB6 759 aaKnown RBP20.85■□□□□ 0.93
SCARF1-202ENST00000348987 ERICH2A1L162 156 aa20.85■□□□□ 0.93
SCARF1-202ENST00000348987 LRRC10BA6NIK2 292 aa20.85■□□□□ 0.93
SCARF1-202ENST00000348987 GOLGA8KD6RF30 607 aa20.85■□□□□ 0.93
SCARF1-202ENST00000348987 KIAA0754O94854 1291 aa20.85■□□□□ 0.93
SCARF1-202ENST00000348987 DEXIO95424 95 aa20.85■□□□□ 0.93
SCARF1-202ENST00000348987 POLD4Q9HCU8 107 aa20.85■□□□□ 0.93
SCARF1-202ENST00000348987 TNKSO95271 1327 aa20.85■□□□□ 0.93
SCARF1-202ENST00000348987 IGHMBP2P38935 993 aaKnown RBP20.84■□□□□ 0.93
SCARF1-202ENST00000348987 CCDC152Q4G0S7 254 aa20.84■□□□□ 0.93
SCARF1-202ENST00000348987 BICDL1Q6ZP65 573 aa20.84■□□□□ 0.93
SCARF1-202ENST00000348987 UBAC1Q9BSL1 405 aa20.84■□□□□ 0.93
SCARF1-202ENST00000348987 JADE2Q9NQC1 790 aa20.84■□□□□ 0.93
SCARF1-202ENST00000348987 TTC26A0AVF1 554 aa20.84■□□□□ 0.93
SCARF1-202ENST00000348987 UBXN1Q04323 297 aa20.84■□□□□ 0.93
SCARF1-202ENST00000348987 TTMPQ5BVD1 217 aa20.84■□□□□ 0.93
SCARF1-202ENST00000348987 C3orf67Q6ZVT6 689 aa20.84■□□□□ 0.93
SCARF1-202ENST00000348987 MEFVO15553 781 aaPredicted RBP20.83■□□□□ 0.93
SCARF1-202ENST00000348987 NTSR2O95665 410 aa20.83■□□□□ 0.93
SCARF1-202ENST00000348987 GNAT2P19087 354 aa20.83■□□□□ 0.93
SCARF1-202ENST00000348987 ATP1A2P50993 1020 aa20.83■□□□□ 0.93
SCARF1-202ENST00000348987 DDR1Q08345 913 aa20.83■□□□□ 0.93
SCARF1-202ENST00000348987 SEC23AQ15436 765 aa20.83■□□□□ 0.93
SCARF1-202ENST00000348987 B4GALNT4Q76KP1 1039 aa20.83■□□□□ 0.93
SCARF1-202ENST00000348987 GSDMAQ96QA5 445 aa20.83■□□□□ 0.93
SCARF1-202ENST00000348987 DMGDHQ9UI17 866 aaKnown RBP20.83■□□□□ 0.93
SCARF1-202ENST00000348987 NID2Q14112 1375 aa20.83■□□□□ 0.93
SCARF1-202ENST00000348987 DOT1LQ8TEK3 1739 aa20.83■□□□□ 0.93
SCARF1-202ENST00000348987 DYNLL1P63167 89 aaKnown RBP20.83■□□□□ 0.92
SCARF1-202ENST00000348987 TRIM14Q14142 442 aa20.83■□□□□ 0.92
SCARF1-202ENST00000348987 FAM182BQ5T319 152 aa20.83■□□□□ 0.92
SCARF1-202ENST00000348987 SH3RF1Q7Z6J0 888 aa20.83■□□□□ 0.92
SCARF1-202ENST00000348987 CCDC24Q8N4L8 307 aa20.83■□□□□ 0.92
SCARF1-202ENST00000348987 LACRTQ9GZZ8 138 aa20.83■□□□□ 0.92
SCARF1-202ENST00000348987 ZEB2O60315 1214 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 FSBPO95073 299 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 TCP11X2Q5H9J9 407 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 FKBP15Q5T1M5 1219 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 KIAA1328Q86T90 577 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 ENAHQ8N8S7 591 aaPredicted RBP20.82■□□□□ 0.92
SCARF1-202ENST00000348987 OR8K1Q8NGG5 319 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 GIMAP7Q8NHV1 300 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 LRRC1Q9BTT6 524 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 DUSP10Q9Y6W6 482 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 RCCD1A6NED2 376 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 KCNJ18B7U540 433 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 OPA1O60313 960 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 PLEKHA8P1O95397 391 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 KCNJ12Q14500 433 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 PKN1Q16512 942 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 RRAGBQ5VZM2 374 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 KCTD16Q68DU8 428 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 SH2D3CQ8N5H7 860 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 TSEN2Q8NCE0 465 aaKnown RBP20.82■□□□□ 0.92
SCARF1-202ENST00000348987 ZKSCAN4Q969J2 545 aaPredicted RBP20.82■□□□□ 0.92
SCARF1-202ENST00000348987 BLZF1Q9H2G9 400 aa20.82■□□□□ 0.92
SCARF1-202ENST00000348987 A1CFQ9NQ94 594 aaKnown RBP20.82■□□□□ 0.92
SCARF1-202ENST00000348987 CHD4Q14839 1912 aa20.81■□□□□ 0.92
SCARF1-202ENST00000348987 IDEP14735 1019 aa20.81■□□□□ 0.92
SCARF1-202ENST00000348987 SLC7A5Q01650 507 aa20.81■□□□□ 0.92
SCARF1-202ENST00000348987 WDR59Q6PJI9 974 aa20.81■□□□□ 0.92
SCARF1-202ENST00000348987 RPAINQ86UA6 219 aa20.81■□□□□ 0.92
SCARF1-202ENST00000348987 AMOTL1Q8IY63 956 aa20.81■□□□□ 0.92
SCARF1-202ENST00000348987 ZNF384Q8TF68 577 aa20.81■□□□□ 0.92
SCARF1-202ENST00000348987 SYMPKQ92797 1274 aaKnown RBP20.81■□□□□ 0.92
SCARF1-202ENST00000348987 CEP131Q9UPN4 1083 aa20.81■□□□□ 0.92
SCARF1-202ENST00000348987 DOCK2Q92608 1830 aa20.81■□□□□ 0.92
SCARF1-202ENST00000348987 SCP2P22307 547 aa20.81■□□□□ 0.92
SCARF1-202ENST00000348987 FAM98CQ17RN3 349 aaKnown RBP20.81■□□□□ 0.92
SCARF1-202ENST00000348987 BAZ2BQ9UIF8 2168 aaKnown RBP20.81■□□□□ 0.92
SCARF1-202ENST00000348987 KRT86O43790 486 aa20.8■□□□□ 0.92
SCARF1-202ENST00000348987 SKOR1P84550 965 aa20.8■□□□□ 0.92
SCARF1-202ENST00000348987 RIOK1Q9BRS2 568 aaKnown RBP20.8■□□□□ 0.92
SCARF1-202ENST00000348987 LUC7L2Q9Y383 392 aaKnown RBP20.8■□□□□ 0.92
SCARF1-202ENST00000348987 TIAM2Q8IVF5 1701 aa20.8■□□□□ 0.92
SCARF1-202ENST00000348987 COL1A1P02452 1464 aaPredicted RBP20.8■□□□□ 0.92
SCARF1-202ENST00000348987 MAGEB6P1A0A0J9YX57 407 aa20.8■□□□□ 0.92
SCARF1-202ENST00000348987 MACROD2A1Z1Q3 448 aa20.8■□□□□ 0.92
SCARF1-202ENST00000348987 MATR3P43243 847 aaKnown RBP eCLIP20.8■□□□□ 0.92
SCARF1-202ENST00000348987 CCDC70Q6NSX1 233 aa20.8■□□□□ 0.92
SCARF1-202ENST00000348987 RUFY1Q96T51 708 aa20.8■□□□□ 0.92
SCARF1-202ENST00000348987 RNF41Q9H4P4 317 aaPredicted RBP20.8■□□□□ 0.92
SCARF1-202ENST00000348987 AATFQ9NY61 560 aaKnown RBP eCLIP20.8■□□□□ 0.92
SCARF1-202ENST00000348987 MAPK8IP1Q9UQF2 711 aa20.8■□□□□ 0.92
SCARF1-202ENST00000348987 V9GY48 417 aaPredicted RBP20.8■□□□□ 0.92
SCARF1-202ENST00000348987 ARAP2Q8WZ64 1704 aa20.8■□□□□ 0.92
SCARF1-202ENST00000348987 PES1O00541 588 aaKnown RBP20.79■□□□□ 0.92
SCARF1-202ENST00000348987 RDXP35241 583 aaKnown RBP20.79■□□□□ 0.92
SCARF1-202ENST00000348987 FUT2Q10981 343 aa20.79■□□□□ 0.92
SCARF1-202ENST00000348987 TMTC2Q8N394 836 aa20.79■□□□□ 0.92
SCARF1-202ENST00000348987 MYH14Q7Z406 1995 aaKnown RBP20.79■□□□□ 0.92
SCARF1-202ENST00000348987 IBSPP21815 317 aaPredicted RBP20.79■□□□□ 0.92
SCARF1-202ENST00000348987 ESR2Q92731 530 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms