RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 NT5C2P49902 561 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 RNASE9P60153 205 aaKnown RBP16.36■□□□□ 0.21
NUP50-201ENST00000347635 RABL6Q3YEC7 729 aaPredicted RBP16.36■□□□□ 0.21
NUP50-201ENST00000347635 GPIHBP1Q8IV16 184 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 CCDC26Q8TAB7 109 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 TMOD4Q9NZQ9 345 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 FAN1Q9Y2M0 1017 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 ENC1O14682 589 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 MFAP3LO75121 409 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 ZNF658Q5TYW1 1059 aaPredicted RBP16.36■□□□□ 0.21
NUP50-201ENST00000347635 GRAPQ13588 217 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 DCAF17Q5H9S7 520 aaPredicted RBP16.36■□□□□ 0.21
NUP50-201ENST00000347635 GRAPLQ8TC17 118 aaPredicted RBP16.36■□□□□ 0.21
NUP50-201ENST00000347635 SCLT1Q96NL6 688 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 BSDC1Q9NW68 430 aaPredicted RBP16.36■□□□□ 0.21
NUP50-201ENST00000347635 COL15A1P39059 1388 aa16.36■□□□□ 0.21
NUP50-201ENST00000347635 PTPREP23469 700 aa16.35■□□□□ 0.21
NUP50-201ENST00000347635 HNRNPH2P55795 449 aaKnown RBP16.35■□□□□ 0.21
NUP50-201ENST00000347635 SFMBT2Q5VUG0 894 aa16.35■□□□□ 0.21
NUP50-201ENST00000347635 SNX29Q8TEQ0 813 aa16.35■□□□□ 0.21
NUP50-201ENST00000347635 PRKAB2O43741 272 aa16.35■□□□□ 0.21
NUP50-201ENST00000347635 DESP17661 470 aa16.35■□□□□ 0.21
NUP50-201ENST00000347635 TRIM28Q13263 835 aaKnown RBP16.35■□□□□ 0.21
NUP50-201ENST00000347635 NUCKS1Q9H1E3 243 aaKnown RBP16.35■□□□□ 0.21
NUP50-201ENST00000347635 USP40Q9NVE5 1235 aa16.35■□□□□ 0.21
NUP50-201ENST00000347635 CEMIPQ8WUJ3 1361 aa16.35■□□□□ 0.21
NUP50-201ENST00000347635 NEDD4P46934 1319 aa16.35■□□□□ 0.21
NUP50-201ENST00000347635 EEF1GP26641 437 aaKnown RBP16.35■□□□□ 0.21
NUP50-201ENST00000347635 CALCRLQ16602 461 aa16.35■□□□□ 0.21
NUP50-201ENST00000347635 RBM43Q6ZSC3 357 aaKnown RBP16.35■□□□□ 0.21
NUP50-201ENST00000347635 LCORLQ8N3X6 602 aa16.35■□□□□ 0.21
NUP50-201ENST00000347635 SAMM50Q9Y512 469 aa16.35■□□□□ 0.21
NUP50-201ENST00000347635 FOXO4P98177 505 aa16.35■□□□□ 0.21
NUP50-201ENST00000347635 SHC4Q6S5L8 630 aa16.35■□□□□ 0.21
NUP50-201ENST00000347635 ZNF579Q8NAF0 562 aaKnown RBP16.35■□□□□ 0.21
NUP50-201ENST00000347635 RRP15Q9Y3B9 282 aaKnown RBP16.35■□□□□ 0.21
NUP50-201ENST00000347635 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.35■□□□□ 0.21
NUP50-201ENST00000347635 IRX3P78415 501 aaPredicted RBP16.34■□□□□ 0.21
NUP50-201ENST00000347635 INF2Q27J81 1249 aa16.34■□□□□ 0.21
NUP50-201ENST00000347635 RC3H1Q5TC82 1133 aaKnown RBP16.34■□□□□ 0.21
NUP50-201ENST00000347635 EPSTI1Q96J88 318 aa16.34■□□□□ 0.21
NUP50-201ENST00000347635 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
NUP50-201ENST00000347635 UTYO14607 1347 aa16.34■□□□□ 0.21
NUP50-201ENST00000347635 ERCC3P19447 782 aa16.34■□□□□ 0.21
NUP50-201ENST00000347635 RPL13P26373 211 aaKnown RBP16.34■□□□□ 0.21
NUP50-201ENST00000347635 GNGT1P63211 74 aa16.34■□□□□ 0.21
NUP50-201ENST00000347635 PLVAPQ9BX97 442 aa16.34■□□□□ 0.21
NUP50-201ENST00000347635 SUSD4Q5VX71 490 aa16.34■□□□□ 0.21
NUP50-201ENST00000347635 NYAP1Q6ZVC0 841 aa16.34■□□□□ 0.21
NUP50-201ENST00000347635 GPKOWQ92917 476 aaPredicted RBP eCLIP16.34■□□□□ 0.21
NUP50-201ENST00000347635 ATP8A2Q9NTI2 1148 aa16.34■□□□□ 0.21
NUP50-201ENST00000347635 KIF4AO95239 1232 aa16.34■□□□□ 0.21
NUP50-201ENST00000347635 CHGBP05060 677 aa16.34■□□□□ 0.21
NUP50-201ENST00000347635 TGFBRAP1Q8WUH2 860 aa16.34■□□□□ 0.21
NUP50-201ENST00000347635 LRRC45Q96CN5 670 aa16.34■□□□□ 0.21
NUP50-201ENST00000347635 ABCB6Q9NP58 842 aa16.34■□□□□ 0.21
NUP50-201ENST00000347635 FAM182BQ5T319 152 aa16.33■□□□□ 0.21
NUP50-201ENST00000347635 CCDC91Q7Z6B0 441 aa16.33■□□□□ 0.21
NUP50-201ENST00000347635 TTLL11Q8NHH1 800 aa16.33■□□□□ 0.21
NUP50-201ENST00000347635 STK24Q9Y6E0 443 aa16.33■□□□□ 0.21
NUP50-201ENST00000347635 RNF40O75150 1001 aa16.33■□□□□ 0.21
NUP50-201ENST00000347635 TCP1P17987 556 aaKnown RBP16.33■□□□□ 0.21
NUP50-201ENST00000347635 ARHGAP25P42331 645 aa16.33■□□□□ 0.21
NUP50-201ENST00000347635 ADCY7P51828 1080 aa16.33■□□□□ 0.21
NUP50-201ENST00000347635 DPY19L2Q6NUT2 758 aa16.33■□□□□ 0.21
NUP50-201ENST00000347635 KLHL7Q8IXQ5 586 aa16.33■□□□□ 0.21
NUP50-201ENST00000347635 STRBPQ96SI9 672 aaKnown RBP16.33■□□□□ 0.21
NUP50-201ENST00000347635 TUBGCP2Q9BSJ2 902 aa16.33■□□□□ 0.21
NUP50-201ENST00000347635 CAPS2Q9BXY5 557 aa16.33■□□□□ 0.21
NUP50-201ENST00000347635 ANKRD62A6NC57 917 aa16.33■□□□□ 0.2
NUP50-201ENST00000347635 PRPF3O43395 683 aaKnown RBP16.33■□□□□ 0.2
NUP50-201ENST00000347635 ATG9AQ7Z3C6 839 aa16.33■□□□□ 0.2
NUP50-201ENST00000347635 PNMA2Q9UL42 364 aa16.33■□□□□ 0.2
NUP50-201ENST00000347635 FAM13AO94988 1023 aa16.33■□□□□ 0.2
NUP50-201ENST00000347635 CDC27P30260 824 aa16.33■□□□□ 0.2
NUP50-201ENST00000347635 GALNT17Q6IS24 598 aa16.33■□□□□ 0.2
NUP50-201ENST00000347635 MAPKAPK5Q8IW41 473 aa16.33■□□□□ 0.2
NUP50-201ENST00000347635 KLHL30Q0D2K2 578 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 MRFAP1Q9Y605 127 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 CTDNEP1O95476 244 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 EPB41P11171 864 aaKnown RBP16.32■□□□□ 0.2
NUP50-201ENST00000347635 CASP8Q14790 479 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 CNOT6LQ96LI5 555 aaKnown RBP16.32■□□□□ 0.2
NUP50-201ENST00000347635 SPATA31A5Q5VU36 1347 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 SPATA31A7Q8IWB4 1347 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 MST1RQ04912 1400 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 SMCO2A6NFE2 343 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 CETN3O15182 167 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 OR52Z1P0C646 297 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 PRR29P0C7W0 189 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 DCAF15Q66K64 600 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 CEP57Q86XR8 500 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 MASTLQ96GX5 879 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 MAGEF1Q9HAY2 307 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 LY9Q9HBG7 655 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 GPCPD1Q9NPB8 672 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 INCENPQ9NQS7 918 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 EZRP15311 586 aaKnown RBP16.32■□□□□ 0.2
NUP50-201ENST00000347635 KRT31Q15323 416 aa16.32■□□□□ 0.2
NUP50-201ENST00000347635 MCTP2Q6DN12 878 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms