RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 KAT14Q9H8E8 782 aa10.63□□□□□ -0.71
ATG4A-202ENST00000345734 DDX19AQ9NUU7 478 aaKnown RBP10.63□□□□□ -0.71
ATG4A-202ENST00000345734 VPS54Q9P1Q0 977 aa10.63□□□□□ -0.71
ATG4A-202ENST00000345734 CRKP46108 304 aa10.63□□□□□ -0.71
ATG4A-202ENST00000345734 NR5A1Q13285 461 aa10.63□□□□□ -0.71
ATG4A-202ENST00000345734 SNW1Q13573 536 aaKnown RBP10.63□□□□□ -0.71
ATG4A-202ENST00000345734 SAFBQ15424 915 aaKnown RBP eCLIP10.63□□□□□ -0.71
ATG4A-202ENST00000345734 NOSTRINQ8IVI9 506 aa10.63□□□□□ -0.71
ATG4A-202ENST00000345734 PNMA1Q8ND90 353 aa10.63□□□□□ -0.71
ATG4A-202ENST00000345734 KCNG4Q8TDN1 519 aa10.63□□□□□ -0.71
ATG4A-202ENST00000345734 PIBF1Q8WXW3 757 aa10.63□□□□□ -0.71
ATG4A-202ENST00000345734 TEKT1Q969V4 418 aa10.63□□□□□ -0.71
ATG4A-202ENST00000345734 TCP11L1Q9NUJ3 509 aa10.63□□□□□ -0.71
ATG4A-202ENST00000345734 TLL1O43897 1013 aa10.62□□□□□ -0.71
ATG4A-202ENST00000345734 MARCKSP29966 332 aaPredicted RBP10.62□□□□□ -0.71
ATG4A-202ENST00000345734 NR1H3Q13133 447 aa10.62□□□□□ -0.71
ATG4A-202ENST00000345734 STRIP1Q5VSL9 837 aa10.62□□□□□ -0.71
ATG4A-202ENST00000345734 ADALQ6DHV7 355 aa10.62□□□□□ -0.71
ATG4A-202ENST00000345734 HHIPL2Q6UWX4 724 aa10.62□□□□□ -0.71
ATG4A-202ENST00000345734 DEPDC4Q8N2C3 294 aa10.62□□□□□ -0.71
ATG4A-202ENST00000345734 STAG2Q8N3U4 1231 aa10.62□□□□□ -0.71
ATG4A-202ENST00000345734 ENGASEQ8NFI3 743 aa10.62□□□□□ -0.71
ATG4A-202ENST00000345734 MAP3K14Q99558 947 aa10.62□□□□□ -0.71
ATG4A-202ENST00000345734 TMEM47Q9BQJ4 181 aa10.62□□□□□ -0.71
ATG4A-202ENST00000345734 STX8Q9UNK0 236 aa10.62□□□□□ -0.71
ATG4A-202ENST00000345734 MTMR7Q9Y216 660 aa10.62□□□□□ -0.71
ATG4A-202ENST00000345734 A0A1B0GVL5 298 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 ZBBXA8MT70 800 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 VEGFAP15692 232 aaPredicted RBP10.61□□□□□ -0.71
ATG4A-202ENST00000345734 NT5C2P49902 561 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 TOB1P50616 345 aaPredicted RBP10.61□□□□□ -0.71
ATG4A-202ENST00000345734 NFIAQ12857 509 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 SLC39A14Q15043 492 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 PTPAQ15257 358 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 AXDND1Q5T1B0 1012 aaPredicted RBP10.61□□□□□ -0.71
ATG4A-202ENST00000345734 CCDC73Q6ZRK6 1079 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 RASGRP2Q7LDG7 609 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 NAP1L5Q96NT1 182 aaPredicted RBP10.61□□□□□ -0.71
ATG4A-202ENST00000345734 ZNF287Q9HBT7 754 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 YDJCA8MPS7 323 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 SLURP2P0DP57 97 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 DPEP1P16444 411 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 JUNDP17535 347 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 KCNA3P22001 575 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 CACNB3P54284 484 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 KIAA2012Q0VF49 1180 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 GRM4Q14833 912 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 RBM43Q6ZSC3 357 aaKnown RBP10.61□□□□□ -0.71
ATG4A-202ENST00000345734 ZFPM1Q8IX07 1006 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 NEDD1Q8NHV4 660 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 MRPS27Q92552 414 aaKnown RBP10.61□□□□□ -0.71
ATG4A-202ENST00000345734 FOXP1Q9H334 677 aaPredicted RBP10.61□□□□□ -0.71
ATG4A-202ENST00000345734 MAD2L2Q9UI95 211 aa10.61□□□□□ -0.71
ATG4A-202ENST00000345734 A0A1W2PQ27 194 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 A0A1W2PQ64 194 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 A0A1W2PQD8 194 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 PPIP5K2O43314 1243 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 KIF5BP33176 963 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 NDUFA8P51970 172 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 FAM160A1Q05DH4 1040 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 TYRO3Q06418 890 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 GABPAQ06546 454 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 SLC35G1Q2M3R5 365 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 CCDC178Q5BJE1 867 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 TTLL6Q8N841 843 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 CEP95Q96GE4 821 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 ZDHHC15Q96MV8 337 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 PHF20Q9BVI0 1012 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 OSBPL5Q9H0X9 879 aaPredicted RBP10.6□□□□□ -0.71
ATG4A-202ENST00000345734 UTRNP46939 3433 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 CCDC192P0DO97 292 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 SOX11P35716 441 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 RBM5P52756 815 aaKnown RBP eCLIP10.6□□□□□ -0.71
ATG4A-202ENST00000345734 FKBP1AP62942 108 aaKnown RBP10.6□□□□□ -0.71
ATG4A-202ENST00000345734 CCDC173Q0VFZ6 552 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 EARS2Q5JPH6 523 aaKnown RBP10.6□□□□□ -0.71
ATG4A-202ENST00000345734 CC2D2BQ6DHV5 1058 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 FMR1NBQ8N0W7 255 aaPredicted RBP10.6□□□□□ -0.71
ATG4A-202ENST00000345734 ANP32BQ92688 251 aaKnown RBP10.6□□□□□ -0.71
ATG4A-202ENST00000345734 PPP1R9BQ96SB3 815 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 CABP5Q9NP86 173 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 MRVI1Q9Y6F6 885 aa10.6□□□□□ -0.71
ATG4A-202ENST00000345734 SIPA1L1O43166 1804 aa10.59□□□□□ -0.71
ATG4A-202ENST00000345734 PSME4Q14997 1843 aa10.59□□□□□ -0.71
ATG4A-202ENST00000345734 KIF13BQ9NQT8 1826 aa10.59□□□□□ -0.71
ATG4A-202ENST00000345734 ZBTB7AO95365 584 aa10.59□□□□□ -0.71
ATG4A-202ENST00000345734 GOLGA8HP0CJ92 632 aa10.59□□□□□ -0.71
ATG4A-202ENST00000345734 SCG2P13521 617 aa10.59□□□□□ -0.71
ATG4A-202ENST00000345734 AKR1B1P15121 316 aa10.59□□□□□ -0.71
ATG4A-202ENST00000345734 XBP1P17861 261 aa10.59□□□□□ -0.71
ATG4A-202ENST00000345734 KRT2P35908 639 aa10.59□□□□□ -0.71
ATG4A-202ENST00000345734 NPY5RQ15761 445 aa10.59□□□□□ -0.71
ATG4A-202ENST00000345734 PTPRNQ16849 979 aa10.59□□□□□ -0.71
ATG4A-202ENST00000345734 NOM1Q5C9Z4 860 aaKnown RBP10.59□□□□□ -0.71
ATG4A-202ENST00000345734 FAM160A2Q8N612 972 aaPredicted RBP10.59□□□□□ -0.71
ATG4A-202ENST00000345734 SUPT20HQ8NEM7 779 aa10.59□□□□□ -0.71
ATG4A-202ENST00000345734 CLIC6Q96NY7 704 aa10.59□□□□□ -0.71
ATG4A-202ENST00000345734 SPSB2Q99619 263 aa10.59□□□□□ -0.71
ATG4A-202ENST00000345734 PCDHB6Q9Y5E3 794 aa10.59□□□□□ -0.71
ATG4A-202ENST00000345734 ADAMTS3O15072 1205 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms