RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 FBXO46Q6PJ61 603 aaPredicted RBP24.24■■□□□ 1.47
SMARCB1-202ENST00000344921 NUDT12Q9BQG2 462 aa24.24■■□□□ 1.47
SMARCB1-202ENST00000344921 RANBP17Q9H2T7 1088 aaKnown RBP24.24■■□□□ 1.47
SMARCB1-202ENST00000344921 KLF18A0A0U1RQI7 1052 aa24.23■■□□□ 1.47
SMARCB1-202ENST00000344921 APOA5Q6Q788 366 aa24.23■■□□□ 1.47
SMARCB1-202ENST00000344921 TNS4Q8IZW8 715 aa24.23■■□□□ 1.47
SMARCB1-202ENST00000344921 AGBL1Q96MI9 1066 aa24.23■■□□□ 1.47
SMARCB1-202ENST00000344921 MAP3K14Q99558 947 aa24.23■■□□□ 1.47
SMARCB1-202ENST00000344921 HOMER2Q9NSB8 354 aa24.23■■□□□ 1.47
SMARCB1-202ENST00000344921 RIPK3Q9Y572 518 aa24.23■■□□□ 1.47
SMARCB1-202ENST00000344921 DOCK3Q8IZD9 2030 aa24.23■■□□□ 1.47
SMARCB1-202ENST00000344921 APOBRQ0VD83 1088 aa24.22■■□□□ 1.47
SMARCB1-202ENST00000344921 C22orf23Q9BZE7 217 aa24.22■■□□□ 1.47
SMARCB1-202ENST00000344921 PDRG1Q9NUG6 133 aa24.22■■□□□ 1.47
SMARCB1-202ENST00000344921 BRPF3Q9ULD4 1205 aa24.22■■□□□ 1.47
SMARCB1-202ENST00000344921 CCPG1Q9ULG6 757 aa24.22■■□□□ 1.47
SMARCB1-202ENST00000344921 PTCH2Q9Y6C5 1203 aa24.22■■□□□ 1.47
SMARCB1-202ENST00000344921 ZBTB43O43298 467 aa24.21■■□□□ 1.47
SMARCB1-202ENST00000344921 STRNO43815 780 aa24.21■■□□□ 1.47
SMARCB1-202ENST00000344921 ALAS1P13196 640 aa24.21■■□□□ 1.47
SMARCB1-202ENST00000344921 PTPREP23469 700 aa24.21■■□□□ 1.47
SMARCB1-202ENST00000344921 SOCS4Q8WXH5 440 aa24.21■■□□□ 1.47
SMARCB1-202ENST00000344921 ZNF536O15090 1300 aa24.21■■□□□ 1.47
SMARCB1-202ENST00000344921 ICAM1P05362 532 aa24.21■■□□□ 1.47
SMARCB1-202ENST00000344921 FCER1AP12319 257 aa24.21■■□□□ 1.47
SMARCB1-202ENST00000344921 FANCBQ8NB91 859 aa24.21■■□□□ 1.47
SMARCB1-202ENST00000344921 GNAQP50148 359 aa24.2■■□□□ 1.46
SMARCB1-202ENST00000344921 CDC37Q16543 378 aaPredicted RBP24.2■■□□□ 1.46
SMARCB1-202ENST00000344921 JMJD4Q9H9V9 463 aa24.2■■□□□ 1.46
SMARCB1-202ENST00000344921 GJD2Q9UKL4 321 aa24.2■■□□□ 1.46
SMARCB1-202ENST00000344921 SLC15A5A6NIM6 579 aa24.19■■□□□ 1.46
SMARCB1-202ENST00000344921 CYP2B6P20813 491 aa24.19■■□□□ 1.46
SMARCB1-202ENST00000344921 KCTD2Q14681 263 aa24.19■■□□□ 1.46
SMARCB1-202ENST00000344921 FBXL16Q8N461 479 aa24.19■■□□□ 1.46
SMARCB1-202ENST00000344921 TRERF1Q96PN7 1200 aa24.19■■□□□ 1.46
SMARCB1-202ENST00000344921 MMP19Q99542 508 aa24.19■■□□□ 1.46
SMARCB1-202ENST00000344921 FBXO40Q9UH90 709 aa24.19■■□□□ 1.46
SMARCB1-202ENST00000344921 MORN1Q5T089 497 aa24.18■■□□□ 1.46
SMARCB1-202ENST00000344921 DPP9Q86TI2 863 aa24.18■■□□□ 1.46
SMARCB1-202ENST00000344921 HOMER1Q86YM7 354 aa24.18■■□□□ 1.46
SMARCB1-202ENST00000344921 CHST13Q8NET6 341 aa24.18■■□□□ 1.46
SMARCB1-202ENST00000344921 LZTS2Q9BRK4 669 aa24.18■■□□□ 1.46
SMARCB1-202ENST00000344921 AGXT2Q9BYV1 514 aa24.18■■□□□ 1.46
SMARCB1-202ENST00000344921 RNF146Q9NTX7 359 aa24.18■■□□□ 1.46
SMARCB1-202ENST00000344921 PNMA2Q9UL42 364 aa24.18■■□□□ 1.46
SMARCB1-202ENST00000344921 PLXNB2O15031 1838 aa24.18■■□□□ 1.46
SMARCB1-202ENST00000344921 GOLGA8AA7E2F4 631 aa24.18■■□□□ 1.46
SMARCB1-202ENST00000344921 GOLGA8BA8MQT2 603 aa24.18■■□□□ 1.46
SMARCB1-202ENST00000344921 ADORA2AP29274 412 aa24.18■■□□□ 1.46
SMARCB1-202ENST00000344921 RGS2P41220 211 aa24.18■■□□□ 1.46
SMARCB1-202ENST00000344921 GRB14Q14449 540 aa24.18■■□□□ 1.46
SMARCB1-202ENST00000344921 TKFCQ3LXA3 575 aa24.18■■□□□ 1.46
SMARCB1-202ENST00000344921 USH1GQ495M9 461 aa24.18■■□□□ 1.46
SMARCB1-202ENST00000344921 SLC9C1Q4G0N8 1177 aa24.18■■□□□ 1.46
SMARCB1-202ENST00000344921 NBPF11Q86T75 865 aa24.18■■□□□ 1.46
SMARCB1-202ENST00000344921 METAP2P50579 478 aaKnown RBP eCLIP24.17■■□□□ 1.46
SMARCB1-202ENST00000344921 MAP2K5Q13163 448 aa24.17■■□□□ 1.46
SMARCB1-202ENST00000344921 TOB2Q14106 344 aaPredicted RBP24.17■■□□□ 1.46
SMARCB1-202ENST00000344921 RTN1Q16799 776 aa24.17■■□□□ 1.46
SMARCB1-202ENST00000344921 QRICH1Q2TAL8 776 aa24.17■■□□□ 1.46
SMARCB1-202ENST00000344921 CMTR1Q8N1G2 835 aaKnown RBP24.17■■□□□ 1.46
SMARCB1-202ENST00000344921 ANKRD35Q8N283 1001 aa24.17■■□□□ 1.46
SMARCB1-202ENST00000344921 CCDC82Q8N4S0 544 aa24.17■■□□□ 1.46
SMARCB1-202ENST00000344921 PIBF1Q8WXW3 757 aa24.17■■□□□ 1.46
SMARCB1-202ENST00000344921 RIOX1Q9H6W3 641 aa24.17■■□□□ 1.46
SMARCB1-202ENST00000344921 ACAD9Q9H845 621 aa24.17■■□□□ 1.46
SMARCB1-202ENST00000344921 RBM28Q9NW13 759 aaKnown RBP24.17■■□□□ 1.46
SMARCB1-202ENST00000344921 ADCY3O60266 1144 aa24.16■■□□□ 1.46
SMARCB1-202ENST00000344921 PLEKHA8P1O95397 391 aa24.16■■□□□ 1.46
SMARCB1-202ENST00000344921 TAL1P17542 331 aaPredicted RBP24.16■■□□□ 1.46
SMARCB1-202ENST00000344921 IRF5Q13568 498 aa24.16■■□□□ 1.46
SMARCB1-202ENST00000344921 ABRAQ8N0Z2 381 aa24.16■■□□□ 1.46
SMARCB1-202ENST00000344921 DDX11Q96FC9 970 aa24.16■■□□□ 1.46
SMARCB1-202ENST00000344921 LARP6Q9BRS8 491 aaKnown RBP24.16■■□□□ 1.46
SMARCB1-202ENST00000344921 BIN2Q9UBW5 565 aaPredicted RBP24.16■■□□□ 1.46
SMARCB1-202ENST00000344921 ZBTB5O15062 677 aa24.15■■□□□ 1.46
SMARCB1-202ENST00000344921 CYTH3O43739 400 aa24.15■■□□□ 1.46
SMARCB1-202ENST00000344921 GRK4P32298 578 aa24.15■■□□□ 1.46
SMARCB1-202ENST00000344921 NEK4P51957 841 aa24.15■■□□□ 1.46
SMARCB1-202ENST00000344921 FBXO11Q86XK2 927 aa24.15■■□□□ 1.46
SMARCB1-202ENST00000344921 IL17RAQ96F46 866 aa24.15■■□□□ 1.46
SMARCB1-202ENST00000344921 PIGSQ96S52 555 aa24.15■■□□□ 1.46
SMARCB1-202ENST00000344921 BACH2Q9BYV9 841 aa24.15■■□□□ 1.46
SMARCB1-202ENST00000344921 SLC5A4Q9NY91 659 aa24.15■■□□□ 1.46
SMARCB1-202ENST00000344921 HPS5Q9UPZ3 1129 aa24.15■■□□□ 1.46
SMARCB1-202ENST00000344921 MYH6P13533 1939 aa24.15■■□□□ 1.46
SMARCB1-202ENST00000344921 RCAN1P53805 252 aa24.15■■□□□ 1.46
SMARCB1-202ENST00000344921 SRBD1Q8N5C6 995 aaKnown RBP24.15■■□□□ 1.46
SMARCB1-202ENST00000344921 SPZ1Q9BXG8 430 aa24.15■■□□□ 1.46
SMARCB1-202ENST00000344921 BAZ2BQ9UIF8 2168 aaKnown RBP24.15■■□□□ 1.46
SMARCB1-202ENST00000344921 ELNP15502 786 aa24.14■■□□□ 1.45
SMARCB1-202ENST00000344921 MUM1L1Q5H9M0 696 aa24.14■■□□□ 1.45
SMARCB1-202ENST00000344921 SLAIN1Q8ND83 568 aa24.14■■□□□ 1.45
SMARCB1-202ENST00000344921 SH3TC2Q8TF17 1288 aa24.14■■□□□ 1.45
SMARCB1-202ENST00000344921 USP6NLQ92738 828 aa24.14■■□□□ 1.45
SMARCB1-202ENST00000344921 RRP36Q96EU6 259 aaKnown RBP24.14■■□□□ 1.45
SMARCB1-202ENST00000344921 APBA2Q99767 749 aa24.14■■□□□ 1.45
SMARCB1-202ENST00000344921 SEC63Q9UGP8 760 aaKnown RBP24.14■■□□□ 1.45
SMARCB1-202ENST00000344921 CENPFP49454 3210 aa24.13■■□□□ 1.45
SMARCB1-202ENST00000344921 CCDC196A0A1B0GTZ2 297 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms