RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 NEK4P51957 841 aa16.12■□□□□ 0.17
TPM4-202ENST00000344824 COL9A3Q14050 684 aaPredicted RBP16.12■□□□□ 0.17
TPM4-202ENST00000344824 TSGA10IPQ3SY00 556 aa16.12■□□□□ 0.17
TPM4-202ENST00000344824 MFSD14CQ5VZR4 134 aa16.12■□□□□ 0.17
TPM4-202ENST00000344824 RCSD1Q6JBY9 416 aa16.12■□□□□ 0.17
TPM4-202ENST00000344824 BLOC1S2Q6QNY1 142 aa16.12■□□□□ 0.17
TPM4-202ENST00000344824 RALYLQ86SE5 291 aaKnown RBP16.12■□□□□ 0.17
TPM4-202ENST00000344824 NEK1Q96PY6 1258 aa16.12■□□□□ 0.17
TPM4-202ENST00000344824 KAT14Q9H8E8 782 aa16.12■□□□□ 0.17
TPM4-202ENST00000344824 SLC38A10Q9HBR0 1119 aa16.12■□□□□ 0.17
TPM4-202ENST00000344824 SLC5A4Q9NY91 659 aa16.12■□□□□ 0.17
TPM4-202ENST00000344824 FLRT1Q9NZU1 646 aa16.12■□□□□ 0.17
TPM4-202ENST00000344824 RPTORQ8N122 1335 aa16.12■□□□□ 0.17
TPM4-202ENST00000344824 MKI67P46013 3256 aaKnown RBP16.12■□□□□ 0.17
TPM4-202ENST00000344824 TFRCP02786 760 aaKnown RBP16.11■□□□□ 0.17
TPM4-202ENST00000344824 PGK2P07205 417 aa16.11■□□□□ 0.17
TPM4-202ENST00000344824 GJA8P48165 433 aa16.11■□□□□ 0.17
TPM4-202ENST00000344824 CACNB2Q08289 660 aaPredicted RBP16.11■□□□□ 0.17
TPM4-202ENST00000344824 CCDC178Q5BJE1 867 aa16.11■□□□□ 0.17
TPM4-202ENST00000344824 TTBK2Q6IQ55 1244 aa16.11■□□□□ 0.17
TPM4-202ENST00000344824 TCEANC2Q96MN5 208 aa16.11■□□□□ 0.17
TPM4-202ENST00000344824 ZSCAN10Q96SZ4 725 aaPredicted RBP16.11■□□□□ 0.17
TPM4-202ENST00000344824 CYP46A1Q9Y6A2 500 aa16.11■□□□□ 0.17
TPM4-202ENST00000344824 COBLO75128 1261 aa16.11■□□□□ 0.17
TPM4-202ENST00000344824 PDHBP11177 359 aa16.11■□□□□ 0.17
TPM4-202ENST00000344824 CNGA1P29973 690 aa16.11■□□□□ 0.17
TPM4-202ENST00000344824 CCND3P30281 292 aaPredicted RBP16.11■□□□□ 0.17
TPM4-202ENST00000344824 CYP2C19P33261 490 aa16.11■□□□□ 0.17
TPM4-202ENST00000344824 NOL8Q76FK4 1167 aaKnown RBP16.11■□□□□ 0.17
TPM4-202ENST00000344824 CHST3Q7LGC8 479 aa16.11■□□□□ 0.17
TPM4-202ENST00000344824 PNMA1Q8ND90 353 aa16.11■□□□□ 0.17
TPM4-202ENST00000344824 NCOA7Q8NI08 942 aa16.11■□□□□ 0.17
TPM4-202ENST00000344824 IL17RAQ96F46 866 aa16.11■□□□□ 0.17
TPM4-202ENST00000344824 TTC14Q96N46 770 aa16.11■□□□□ 0.17
TPM4-202ENST00000344824 ZSWIM5Q9P217 1185 aa16.11■□□□□ 0.17
TPM4-202ENST00000344824 PRR12Q9ULL5 1215 aa16.11■□□□□ 0.17
TPM4-202ENST00000344824 RIPK3Q9Y572 518 aa16.11■□□□□ 0.17
TPM4-202ENST00000344824 FARP2O94887 1054 aaPredicted RBP16.1■□□□□ 0.17
TPM4-202ENST00000344824 SGPL1O95470 568 aa16.1■□□□□ 0.17
TPM4-202ENST00000344824 HOXC6P09630 235 aa16.1■□□□□ 0.17
TPM4-202ENST00000344824 GOLGA8HP0CJ92 632 aa16.1■□□□□ 0.17
TPM4-202ENST00000344824 ALAS1P13196 640 aa16.1■□□□□ 0.17
TPM4-202ENST00000344824 TAL1P17542 331 aaPredicted RBP16.1■□□□□ 0.17
TPM4-202ENST00000344824 NOVP48745 357 aa16.1■□□□□ 0.17
TPM4-202ENST00000344824 IFIT1BQ5T764 474 aaKnown RBP16.1■□□□□ 0.17
TPM4-202ENST00000344824 SYDE2Q5VT97 1194 aa16.1■□□□□ 0.17
TPM4-202ENST00000344824 RUFY3Q7L099 469 aa16.1■□□□□ 0.17
TPM4-202ENST00000344824 CYB5R4Q7L1T6 521 aa16.1■□□□□ 0.17
TPM4-202ENST00000344824 ENAHQ8N8S7 591 aaPredicted RBP16.1■□□□□ 0.17
TPM4-202ENST00000344824 DDX11Q96FC9 970 aa16.1■□□□□ 0.17
TPM4-202ENST00000344824 AGBL1Q96MI9 1066 aa16.1■□□□□ 0.17
TPM4-202ENST00000344824 LRRC2Q9BYS8 371 aa16.1■□□□□ 0.17
TPM4-202ENST00000344824 TM6SF1Q9BZW5 370 aa16.1■□□□□ 0.17
TPM4-202ENST00000344824 ZSWIM6Q9HCJ5 1215 aa16.1■□□□□ 0.17
TPM4-202ENST00000344824 PAK6Q9NQU5 681 aaPredicted RBP16.1■□□□□ 0.17
TPM4-202ENST00000344824 PDRG1Q9NUG6 133 aa16.1■□□□□ 0.17
TPM4-202ENST00000344824 LCTP09848 1927 aa16.09■□□□□ 0.17
TPM4-202ENST00000344824 ALPK3Q96L96 1907 aa16.09■□□□□ 0.17
TPM4-202ENST00000344824 FDX1P10109 184 aa16.09■□□□□ 0.17
TPM4-202ENST00000344824 RPS6KB1P23443 525 aa16.09■□□□□ 0.17
TPM4-202ENST00000344824 NT5C2P49902 561 aa16.09■□□□□ 0.17
TPM4-202ENST00000344824 DGKHQ86XP1 1220 aa16.09■□□□□ 0.17
TPM4-202ENST00000344824 ABRAQ8N0Z2 381 aa16.09■□□□□ 0.17
TPM4-202ENST00000344824 ANKRD35Q8N283 1001 aa16.09■□□□□ 0.17
TPM4-202ENST00000344824 RNF146Q9NTX7 359 aa16.09■□□□□ 0.17
TPM4-202ENST00000344824 CEP290O15078 2479 aa16.08■□□□□ 0.16
TPM4-202ENST00000344824 BAZ2BQ9UIF8 2168 aaKnown RBP16.08■□□□□ 0.16
TPM4-202ENST00000344824 ERICH2A1L162 156 aa16.08■□□□□ 0.16
TPM4-202ENST00000344824 DHX16O60231 1041 aaKnown RBP16.08■□□□□ 0.16
TPM4-202ENST00000344824 ST18O60284 1047 aa16.08■□□□□ 0.16
TPM4-202ENST00000344824 CD2BP2O95400 341 aaKnown RBP16.08■□□□□ 0.16
TPM4-202ENST00000344824 OAZ1P54368 228 aa16.08■□□□□ 0.16
TPM4-202ENST00000344824 ZNF543Q08ER8 600 aa16.08■□□□□ 0.16
TPM4-202ENST00000344824 MB21D2Q8IYB1 491 aaPredicted RBP16.08■□□□□ 0.16
TPM4-202ENST00000344824 ACAD9Q9H845 621 aa16.08■□□□□ 0.16
TPM4-202ENST00000344824 FBXO40Q9UH90 709 aa16.08■□□□□ 0.16
TPM4-202ENST00000344824 CCPG1Q9ULG6 757 aa16.08■□□□□ 0.16
TPM4-202ENST00000344824 ATP2A1O14983 1001 aa16.07■□□□□ 0.16
TPM4-202ENST00000344824 PRC1O43663 620 aa16.07■□□□□ 0.16
TPM4-202ENST00000344824 PLA2G6O60733 806 aa16.07■□□□□ 0.16
TPM4-202ENST00000344824 HMGB1P09429 215 aaKnown RBP16.07■□□□□ 0.16
TPM4-202ENST00000344824 FGD1P98174 961 aa16.07■□□□□ 0.16
TPM4-202ENST00000344824 MAP3K21Q5TCX8 1036 aa16.07■□□□□ 0.16
TPM4-202ENST00000344824 DHX32Q7L7V1 743 aaKnown RBP16.07■□□□□ 0.16
TPM4-202ENST00000344824 MAML3Q96JK9 1138 aa16.07■□□□□ 0.16
TPM4-202ENST00000344824 LARP6Q9BRS8 491 aaKnown RBP16.07■□□□□ 0.16
TPM4-202ENST00000344824 CPVLQ9H3G5 476 aa16.07■□□□□ 0.16
TPM4-202ENST00000344824 ZNF536O15090 1300 aa16.07■□□□□ 0.16
TPM4-202ENST00000344824 IFIT3O14879 490 aaKnown RBP16.06■□□□□ 0.16
TPM4-202ENST00000344824 MCM5P33992 734 aa16.06■□□□□ 0.16
TPM4-202ENST00000344824 SART3Q15020 963 aaKnown RBP16.06■□□□□ 0.16
TPM4-202ENST00000344824 GPATCH4Q5T3I0 446 aaKnown RBP16.06■□□□□ 0.16
TPM4-202ENST00000344824 ANO1Q5XXA6 986 aa16.06■□□□□ 0.16
TPM4-202ENST00000344824 OLFML2BQ68BL8 750 aa16.06■□□□□ 0.16
TPM4-202ENST00000344824 HSCBQ8IWL3 235 aa16.06■□□□□ 0.16
TPM4-202ENST00000344824 CHST13Q8NET6 341 aa16.06■□□□□ 0.16
TPM4-202ENST00000344824 TRERF1Q96PN7 1200 aa16.06■□□□□ 0.16
TPM4-202ENST00000344824 UBA5Q9GZZ9 404 aa16.06■□□□□ 0.16
TPM4-202ENST00000344824 LRRC37A2A6NM11 1700 aa16.06■□□□□ 0.16
TPM4-202ENST00000344824 MYCNP04198 464 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms