RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 PNMA8AQ86V59 439 aaPredicted RBP8.9□□□□□ -0.98
UBE4B-202ENST00000343090 TRIML1Q8N9V2 468 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 U2AF1L4Q8WU68 220 aaKnown RBP8.9□□□□□ -0.98
UBE4B-202ENST00000343090 JDP2Q8WYK2 163 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 DDX12PQ92771 950 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 PGBD1Q96JS3 809 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 USTQ9Y2C2 406 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 RIPOR2Q9Y4F9 1068 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 SH2B2O14492 632 aaPredicted RBP8.9□□□□□ -0.98
UBE4B-202ENST00000343090 GUCY2CP25092 1073 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 DOK7Q18PE1 504 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 C6orf163Q5TEZ5 329 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 MYOCDQ8IZQ8 938 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 KIFC2Q96AC6 838 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 PCDHB6Q9Y5E3 794 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 COMMD10Q9Y6G5 202 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 ABCC3O15438 1527 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 NEK8Q86SG6 692 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 SLC35F6Q8N357 371 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 TTC14Q96N46 770 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 MPHOSPH6Q99547 160 aaKnown RBP8.9□□□□□ -0.98
UBE4B-202ENST00000343090 GJA3Q9Y6H8 435 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 CFAP74Q9C0B2 1584 aa8.9□□□□□ -0.98
UBE4B-202ENST00000343090 SNAP23O00161 211 aa8.9□□□□□ -0.99
UBE4B-202ENST00000343090 ZMYND10O75800 440 aa8.9□□□□□ -0.99
UBE4B-202ENST00000343090 POLR2FP61218 127 aaKnown RBP8.9□□□□□ -0.99
UBE4B-202ENST00000343090 ADAT2Q7Z6V5 191 aaKnown RBP8.9□□□□□ -0.99
UBE4B-202ENST00000343090 FERMT1Q9BQL6 677 aa8.9□□□□□ -0.99
UBE4B-202ENST00000343090 PSTPIP2Q9H939 334 aa8.9□□□□□ -0.99
UBE4B-202ENST00000343090 ABCB6Q9NP58 842 aa8.9□□□□□ -0.99
UBE4B-202ENST00000343090 EPN1Q9Y6I3 576 aaPredicted RBP8.9□□□□□ -0.99
UBE4B-202ENST00000343090 TMEM94Q12767 1356 aa8.9□□□□□ -0.99
UBE4B-202ENST00000343090 LOC102724428A0A0B4J2F2 783 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 DDAH1O94760 285 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 STAMBPO95630 424 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 DNM2P50570 870 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 SMTNP53814 917 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 SIK1P57059 783 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 PAK2Q13177 524 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 E2F5Q15329 346 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 MUM1L1Q5H9M0 696 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 NSMFQ6X4W1 530 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 ZNF354CQ86Y25 554 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 KIFAP3Q92845 792 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 PCDHA12Q9UN75 941 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 SOWAHDA6NJG2 315 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 H7C1D1 291 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 KCNK3O14649 394 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 FLOT1O75955 427 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 TSNARE1Q96NA8 513 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 NAP1L3Q99457 506 aaPredicted RBP8.89□□□□□ -0.99
UBE4B-202ENST00000343090 FOXP1Q9H334 677 aaPredicted RBP8.89□□□□□ -0.99
UBE4B-202ENST00000343090 PANK4Q9NVE7 773 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 ASIC3Q9UHC3 531 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 ACTN4O43707 911 aaKnown RBP8.89□□□□□ -0.99
UBE4B-202ENST00000343090 STX10O60499 249 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 SORBS3O60504 671 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 MMP1P03956 469 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 PRKG1Q13976 671 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 CASP8Q14790 479 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 NLRP10Q86W26 655 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 SYNE4Q8N205 404 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 UBL4BQ8N7F7 174 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.89□□□□□ -0.99
UBE4B-202ENST00000343090 CDC23Q9UJX2 597 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 GOLGA8KD6RF30 607 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 BIRC2Q13490 618 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 LRRC41Q15345 812 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 SPATS2Q86XZ4 545 aaKnown RBP8.89□□□□□ -0.99
UBE4B-202ENST00000343090 ACRBPQ8NEB7 543 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 EPSTI1Q96J88 318 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 PPANQ9NQ55 473 aaKnown RBP8.89□□□□□ -0.99
UBE4B-202ENST00000343090 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.89□□□□□ -0.993e-7■■■■□ 19.7
UBE4B-202ENST00000343090 AGTPBP1Q9UPW5 1226 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 HECW2Q9P2P5 1572 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 CACNB1Q02641 598 aaPredicted RBP8.89□□□□□ -0.99
UBE4B-202ENST00000343090 CNOT6LQ96LI5 555 aaKnown RBP8.89□□□□□ -0.99
UBE4B-202ENST00000343090 GOLPH3LQ9H4A5 285 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 NKIRAS1Q9NYS0 192 aa8.89□□□□□ -0.99
UBE4B-202ENST00000343090 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.89□□□□□ -0.99
UBE4B-202ENST00000343090 CYP4A11Q02928 519 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 ERFEQ4G0M1 354 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 FAM182BQ5T319 152 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 TRIM58Q8NG06 486 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 TBC1D31Q96DN5 1066 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 SH2D4AQ9H788 454 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 DDX25Q9UHL0 483 aaKnown RBP8.88□□□□□ -0.99
UBE4B-202ENST00000343090 ZNF804BA4D1E1 1349 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 GLI2P10070 1586 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 PCK1P35558 622 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 MCAMP43121 646 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 RBBP5Q15291 538 aaKnown RBP8.88□□□□□ -0.99
UBE4B-202ENST00000343090 SARM1Q6SZW1 724 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 ZNF365Q70YC5 407 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 KIAA0825Q8IV33 1275 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 CCDC105Q8IYK2 499 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 LRRC45Q96CN5 670 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 CEP63Q96MT8 703 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 TUBGCP2Q9BSJ2 902 aa8.88□□□□□ -0.99
UBE4B-202ENST00000343090 NT5C3AQ9H0P0 336 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms