RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 MYRIPQ8NFW9 859 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 FAM193BQ96PV7 902 aaPredicted RBP19.17■□□□□ 0.66
SMAD4-201ENST00000342988 KIF2CQ99661 725 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 ATP11BQ9Y2G3 1177 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 H0Y626 953 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 TRIM16O95361 564 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 SESTD1Q86VW0 696 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 MYLK4Q86YV6 388 aaPredicted RBP19.17■□□□□ 0.66
SMAD4-201ENST00000342988 SNX19Q92543 992 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 ZBTB9Q96C00 473 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 GINS2Q9Y248 185 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 EXOC3O60645 756 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 TNNC2P02585 160 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 RANBP1P43487 201 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 GUCY2FP51841 1108 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 PRG3Q9Y2Y8 225 aaPredicted RBP19.17■□□□□ 0.66
SMAD4-201ENST00000342988 TRPC1P48995 793 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 PRIM1P49642 420 aaKnown RBP19.17■□□□□ 0.66
SMAD4-201ENST00000342988 ELMSAN1Q6PJG2 1045 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 WASHC5Q12768 1159 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 LDHBP07195 334 aaKnown RBP19.17■□□□□ 0.66
SMAD4-201ENST00000342988 LETM2Q2VYF4 491 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 MYSM1Q5VVJ2 828 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 INTS4Q96HW7 963 aaKnown RBP19.17■□□□□ 0.66
SMAD4-201ENST00000342988 NLRP3Q96P20 1036 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 EDEM3Q9BZQ6 932 aa19.17■□□□□ 0.66
SMAD4-201ENST00000342988 CPP00450 1065 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 ACTN1P12814 892 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 UIMC1Q96RL1 719 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 NT5C3AQ9H0P0 336 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 C1orf112Q9NSG2 853 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 DONSONQ9NYP3 566 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 SYNJ2O15056 1496 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 OCRLQ01968 901 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 RAB3GAP1Q15042 981 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 RNF169Q8NCN4 708 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 ARHGAP10A1A4S6 786 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 SRGAP2CP0DJJ0 459 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 PAMP19021 973 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 CAPRIN1Q14444 709 aaKnown RBP19.16■□□□□ 0.66
SMAD4-201ENST00000342988 SELENONQ9NZV5 590 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 SLC17A8Q8NDX2 589 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 EYA3Q99504 573 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 RBM8AQ9Y5S9 174 aaKnown RBP19.16■□□□□ 0.66
SMAD4-201ENST00000342988 FAM180AQ6UWF9 173 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 BCAS4Q8TDM0 211 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 N4BP2L2Q92802 583 aaPredicted RBP19.16■□□□□ 0.66
SMAD4-201ENST00000342988 INTS9Q9NV88 658 aaKnown RBP19.16■□□□□ 0.66
SMAD4-201ENST00000342988 MIS18AQ9NYP9 233 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 WARS2Q9UGM6 360 aaKnown RBP19.16■□□□□ 0.66
SMAD4-201ENST00000342988 SUN2Q9UH99 717 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.16■□□□□ 0.664e-6■□□□□ 8.8
SMAD4-201ENST00000342988 ST13P50502 369 aaKnown RBP19.16■□□□□ 0.66
SMAD4-201ENST00000342988 FRA10AC1Q70Z53 315 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 NDUFAF2Q8N183 169 aa19.16■□□□□ 0.66
SMAD4-201ENST00000342988 LLPHQ9BRT6 129 aaKnown RBP19.16■□□□□ 0.66
SMAD4-201ENST00000342988 ZBTB12Q9Y330 459 aaPredicted RBP19.16■□□□□ 0.66
SMAD4-201ENST00000342988 KLC2Q9H0B6 622 aa19.15■□□□□ 0.66
SMAD4-201ENST00000342988 SLC9A5Q14940 896 aa19.15■□□□□ 0.66
SMAD4-201ENST00000342988 DDX28Q9NUL7 540 aaKnown RBP19.15■□□□□ 0.66
SMAD4-201ENST00000342988 SGK1O00141 431 aa19.15■□□□□ 0.66
SMAD4-201ENST00000342988 DEXIO95424 95 aa19.15■□□□□ 0.66
SMAD4-201ENST00000342988 MAGEB6Q8N7X4 407 aa19.15■□□□□ 0.66
SMAD4-201ENST00000342988 ST13P5Q8NFI4 369 aaPredicted RBP19.15■□□□□ 0.66
SMAD4-201ENST00000342988 ZC3H12CQ9C0D7 883 aaKnown RBP19.15■□□□□ 0.66
SMAD4-201ENST00000342988 HESX1Q9UBX0 185 aa19.15■□□□□ 0.66
SMAD4-201ENST00000342988 DMP1Q13316 513 aaPredicted RBP19.15■□□□□ 0.66
SMAD4-201ENST00000342988 AFAP1Q8N556 730 aa19.15■□□□□ 0.66
SMAD4-201ENST00000342988 TLK1Q9UKI8 766 aa19.15■□□□□ 0.66
SMAD4-201ENST00000342988 DAB1O75553 588 aa19.15■□□□□ 0.66
SMAD4-201ENST00000342988 CEP78Q5JTW2 689 aa19.15■□□□□ 0.66
SMAD4-201ENST00000342988 FAM81BQ96LP2 452 aa19.15■□□□□ 0.66
SMAD4-201ENST00000342988 ANKRD2Q9GZV1 360 aa19.15■□□□□ 0.66
SMAD4-201ENST00000342988 NUDCD1Q96RS6 583 aa19.15■□□□□ 0.66
SMAD4-201ENST00000342988 SUGT1Q9Y2Z0 365 aa19.15■□□□□ 0.66
SMAD4-201ENST00000342988 TEX11Q8IYF3 940 aa19.14■□□□□ 0.66
SMAD4-201ENST00000342988 TRIM11Q96F44 468 aa19.14■□□□□ 0.66
SMAD4-201ENST00000342988 ADPGKQ9BRR6 497 aa19.14■□□□□ 0.66
SMAD4-201ENST00000342988 ZNF229Q9UJW7 825 aa19.14■□□□□ 0.66
SMAD4-201ENST00000342988 TTC41PQ6P2S7 1318 aa19.14■□□□□ 0.66
SMAD4-201ENST00000342988 NCLNQ969V3 563 aa19.14■□□□□ 0.66
SMAD4-201ENST00000342988 GINS4Q9BRT9 223 aa19.14■□□□□ 0.66
SMAD4-201ENST00000342988 KCNK3O14649 394 aa19.14■□□□□ 0.65
SMAD4-201ENST00000342988 CCDC15Q0P6D6 951 aa19.14■□□□□ 0.65
SMAD4-201ENST00000342988 TRIM71Q2Q1W2 868 aaKnown RBP19.14■□□□□ 0.65
SMAD4-201ENST00000342988 SLC9C2Q5TAH2 1124 aa19.14■□□□□ 0.65
SMAD4-201ENST00000342988 SSH1Q8WYL5 1049 aa19.14■□□□□ 0.65
SMAD4-201ENST00000342988 TCHHQ07283 1943 aa19.14■□□□□ 0.65
SMAD4-201ENST00000342988 MCF2LO15068 1137 aa19.14■□□□□ 0.65
SMAD4-201ENST00000342988 SZRD1Q7Z422 152 aa19.14■□□□□ 0.65
SMAD4-201ENST00000342988 RMDN2Q96LZ7 410 aa19.14■□□□□ 0.65
SMAD4-201ENST00000342988 L3MBTL1Q9Y468 752 aa19.14■□□□□ 0.65
SMAD4-201ENST00000342988 ABCD1P33897 745 aa19.14■□□□□ 0.65
SMAD4-201ENST00000342988 IGBP1P78318 339 aa19.14■□□□□ 0.65
SMAD4-201ENST00000342988 ATP8B3O60423 1300 aa19.14■□□□□ 0.65
SMAD4-201ENST00000342988 TMEM191CA6NGB0 347 aa19.14■□□□□ 0.65
SMAD4-201ENST00000342988 TMEM191BP0C7N4 346 aa19.14■□□□□ 0.65
SMAD4-201ENST00000342988 KIF19Q2TAC6 998 aa19.14■□□□□ 0.65
SMAD4-201ENST00000342988 TTBK2Q6IQ55 1244 aa19.14■□□□□ 0.65
SMAD4-201ENST00000342988 PAPOLBQ9NRJ5 636 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms