RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 VSNL1P62760 191 aa14.04□□□□□ -0.16
LMX1A-202ENST00000342310 KIF5AQ12840 1032 aa14.04□□□□□ -0.16
LMX1A-202ENST00000342310 TXNRD1Q16881 649 aa14.04□□□□□ -0.16
LMX1A-202ENST00000342310 TMC4Q7Z404 712 aa14.04□□□□□ -0.16
LMX1A-202ENST00000342310 OR8K1Q8NGG5 319 aa14.04□□□□□ -0.16
LMX1A-202ENST00000342310 JAKMIP2Q96AA8 810 aa14.04□□□□□ -0.16
LMX1A-202ENST00000342310 MXD3Q9BW11 206 aa14.04□□□□□ -0.16
LMX1A-202ENST00000342310 ADD3Q9UEY8 706 aaKnown RBP14.04□□□□□ -0.16
LMX1A-202ENST00000342310 LLGL1Q15334 1064 aa14.04□□□□□ -0.16
LMX1A-202ENST00000342310 TCP11X2Q5H9J9 407 aa14.04□□□□□ -0.16
LMX1A-202ENST00000342310 CCDC70Q6NSX1 233 aa14.04□□□□□ -0.16
LMX1A-202ENST00000342310 PNKPQ96T60 521 aa14.04□□□□□ -0.16
LMX1A-202ENST00000342310 PHF20Q9BVI0 1012 aa14.04□□□□□ -0.16
LMX1A-202ENST00000342310 BMP2KQ9NSY1 1161 aaPredicted RBP14.04□□□□□ -0.16
LMX1A-202ENST00000342310 PKD2L1Q9P0L9 805 aa14.04□□□□□ -0.16
LMX1A-202ENST00000342310 CDC23Q9UJX2 597 aa14.04□□□□□ -0.16
LMX1A-202ENST00000342310 PLEKP08567 350 aaPredicted RBP14.03□□□□□ -0.16
LMX1A-202ENST00000342310 ERCC5P28715 1186 aaPredicted RBP14.03□□□□□ -0.16
LMX1A-202ENST00000342310 ERVK-24P63145 666 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 ZSCAN26Q16670 478 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 SRGAP1Q7Z6B7 1085 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 TBCKQ8TEA7 893 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 RIOK1Q9BRS2 568 aaKnown RBP14.03□□□□□ -0.16
LMX1A-202ENST00000342310 L2HGDHQ9H9P8 463 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 ABHD10Q9NUJ1 306 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 LRWD1Q9UFC0 647 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 MYO6Q9UM54 1294 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 BTDP43251 543 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 C2orf54Q08AI8 447 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 UBE4AQ14139 1066 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 USH1GQ495M9 461 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 KCTD1Q719H9 257 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 TMTC1Q8IUR5 882 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 CEP112Q8N8E3 955 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 SNX29Q8TEQ0 813 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 RMND1Q9NWS8 449 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 MRFAP1Q9Y605 127 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 PPP1R3GB7ZBB8 358 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 MDM2Q00987 491 aaPredicted RBP14.03□□□□□ -0.16
LMX1A-202ENST00000342310 SEC23AQ15436 765 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 ALX1Q15699 326 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 SMARCC1Q92922 1105 aaPredicted RBP14.03□□□□□ -0.16
LMX1A-202ENST00000342310 BCCIPQ9P287 314 aaKnown RBP eCLIP14.03□□□□□ -0.16
LMX1A-202ENST00000342310 BCS1LQ9Y276 419 aa14.03□□□□□ -0.16
LMX1A-202ENST00000342310 GTPBP6O43824 516 aaPredicted RBP14.02□□□□□ -0.16
LMX1A-202ENST00000342310 SPAG1Q07617 926 aa14.02□□□□□ -0.16
LMX1A-202ENST00000342310 STK4Q13043 487 aa14.02□□□□□ -0.16
LMX1A-202ENST00000342310 MAEAQ7L5Y9 396 aa14.02□□□□□ -0.16
LMX1A-202ENST00000342310 CNBD1Q8NA66 436 aa14.02□□□□□ -0.16
LMX1A-202ENST00000342310 RRP36Q96EU6 259 aaKnown RBP14.02□□□□□ -0.16
LMX1A-202ENST00000342310 CNOT6LQ96LI5 555 aaKnown RBP14.02□□□□□ -0.16
LMX1A-202ENST00000342310 BMP15O95972 392 aa14.02□□□□□ -0.17
LMX1A-202ENST00000342310 ZYXQ15942 572 aaKnown RBP14.02□□□□□ -0.17
LMX1A-202ENST00000342310 GPATCH11Q8N954 259 aa14.02□□□□□ -0.17
LMX1A-202ENST00000342310 LINC00116Q8NCU8 138 aa14.02□□□□□ -0.17
LMX1A-202ENST00000342310 A0A1B0GTH6 734 aa14.02□□□□□ -0.17
LMX1A-202ENST00000342310 KRT86O43790 486 aa14.02□□□□□ -0.17
LMX1A-202ENST00000342310 ZEB2O60315 1214 aa14.02□□□□□ -0.17
LMX1A-202ENST00000342310 NDUFA10O95299 355 aa14.02□□□□□ -0.17
LMX1A-202ENST00000342310 ATP1A1P05023 1023 aaKnown RBP14.02□□□□□ -0.17
LMX1A-202ENST00000342310 HLTFQ14527 1009 aaKnown RBP eCLIP14.02□□□□□ -0.17
LMX1A-202ENST00000342310 TMEM47Q9BQJ4 181 aa14.02□□□□□ -0.17
LMX1A-202ENST00000342310 TMCO5BA8MYB1 307 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 NCK2O43639 380 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 TAL1P17542 331 aaPredicted RBP14.01□□□□□ -0.17
LMX1A-202ENST00000342310 PRPF4BQ13523 1007 aaKnown RBP14.01□□□□□ -0.17
LMX1A-202ENST00000342310 KCTD16Q68DU8 428 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 SLC30A10Q6XR72 485 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 MLXIPQ9HAP2 919 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 C6orf50Q9HD87 102 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 DISC1Q9NRI5 854 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 ADAM21Q9UKJ8 722 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 MEIS1O00470 390 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 CHMP2AO43633 222 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 TBC1D8O95759 1140 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 CYLC1P35663 651 aaPredicted RBP14.01□□□□□ -0.17
LMX1A-202ENST00000342310 MAP3K9P80192 1104 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 APBA1Q02410 837 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 CYP4A11Q02928 519 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 RAPGEF1Q13905 1077 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 NONOQ15233 471 aaKnown RBP eCLIP14.01□□□□□ -0.17
LMX1A-202ENST00000342310 FCHSD1Q86WN1 690 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 TRIML1Q8N9V2 468 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 TMX4Q9H1E5 349 aaPredicted RBP14.01□□□□□ -0.17
LMX1A-202ENST00000342310 BSDC1Q9NW68 430 aaPredicted RBP14.01□□□□□ -0.17
LMX1A-202ENST00000342310 TTF2Q9UNY4 1162 aaKnown RBP14.01□□□□□ -0.17
LMX1A-202ENST00000342310 MED1Q15648 1581 aaPredicted RBP14.01□□□□□ -0.17
LMX1A-202ENST00000342310 USP17L5A8MUK1 530 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 H2AFXP16104 143 aaPredicted RBP14.01□□□□□ -0.17
LMX1A-202ENST00000342310 DCAF17Q5H9S7 520 aaPredicted RBP14.01□□□□□ -0.17
LMX1A-202ENST00000342310 DPP8Q6V1X1 898 aaPredicted RBP14.01□□□□□ -0.17
LMX1A-202ENST00000342310 FAM196AQ6ZSG2 479 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 POTEDQ86YR6 584 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 PACSIN2Q9UNF0 486 aaPredicted RBP14.01□□□□□ -0.17
LMX1A-202ENST00000342310 SAR1BQ9Y6B6 198 aa14.01□□□□□ -0.17
LMX1A-202ENST00000342310 ESYT3A0FGR9 886 aa14□□□□□ -0.17
LMX1A-202ENST00000342310 ZNF18P17022 549 aa14□□□□□ -0.17
LMX1A-202ENST00000342310 IL17AQ16552 155 aa14□□□□□ -0.17
LMX1A-202ENST00000342310 SND1Q7KZF4 910 aaKnown RBP eCLIP14□□□□□ -0.17
LMX1A-202ENST00000342310 HDXQ7Z353 690 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms