RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 PUM3Q15397 648 aaKnown RBP13.83□□□□□ -0.2
SSX2IP-201ENST00000342203 CYB5R4Q7L1T6 521 aa13.83□□□□□ -0.2
SSX2IP-201ENST00000342203 ATP6V0A2Q9Y487 856 aa13.83□□□□□ -0.2
SSX2IP-201ENST00000342203 IQGAP3Q86VI3 1631 aa13.83□□□□□ -0.2
SSX2IP-201ENST00000342203 VPS41P49754 854 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 MTMR3Q13615 1198 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 GSTA5Q7RTV2 222 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 CCDC197Q8NCU1 140 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 LRRC1Q9BTT6 524 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 CETN3O15182 167 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 GNA11P29992 359 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 LRRC41Q15345 812 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 HIP1RO75146 1068 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 EXOSC10Q01780 885 aaKnown RBP13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 PLCB3Q01970 1234 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 TBC1D10CQ8IV04 446 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 FNBP4Q8N3X1 1017 aaPredicted RBP13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 MB21D1Q8N884 522 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 SPOPO43791 374 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 KRT14P02533 472 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 HNRNPH1P31943 449 aaKnown RBP13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 ZNF131P52739 623 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 ZBED6P86452 979 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 GRIN1Q05586 938 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 EMBQ6PCB8 327 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 AP1M1Q9BXS5 423 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 AATFQ9NY61 560 aaKnown RBP eCLIP13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 KIF11P52732 1056 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 SEC24CP53992 1094 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 ALS2CLQ60I27 953 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 U2AF1L4Q8WU68 220 aaKnown RBP13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 ASIC3Q9UHC3 531 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 SUFUQ9UMX1 484 aa13.82□□□□□ -0.2
SSX2IP-201ENST00000342203 ZRANB2O95218 330 aaKnown RBP eCLIP13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 C6orf163Q5TEZ5 329 aa13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 CCDC105Q8IYK2 499 aa13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 INTS9Q9NV88 658 aaKnown RBP13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 DHX9Q08211 1270 aaKnown RBP13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 ALDH8A1Q9H2A2 487 aaPredicted RBP13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 TUBE1Q9UJT0 475 aa13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 E9PCH4 1651 aa13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 NCAPHQ15003 741 aa13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 ZNF658Q5TYW1 1059 aaPredicted RBP13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 BLIDQ8IZY5 108 aa13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 RRP36Q96EU6 259 aaKnown RBP13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 SPATS2LQ9NUQ6 558 aaKnown RBP13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 RWDD2AQ9UIY3 292 aa13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 PLAAQ9Y263 795 aa13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 EEF1GP26641 437 aaKnown RBP13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 GUCY1A2P33402 732 aa13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 CCDC38Q502W7 563 aa13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 TRIM6Q9C030 488 aaPredicted RBP13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 HPCAL4Q9UM19 191 aa13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 PCDHA13Q9Y5I0 950 aa13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 SNAP23O00161 211 aa13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 EIF6P56537 245 aaKnown RBP13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 APBA1Q02410 837 aa13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 TMEM132AQ24JP5 1023 aa13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 CCDC65Q8IXS2 484 aa13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 PPFIBP2Q8ND30 876 aa13.81□□□□□ -0.2
SSX2IP-201ENST00000342203 ATP7BP35670 1465 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 MED23Q9ULK4 1368 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 MYO1EQ12965 1108 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 CRACR2BQ8N4Y2 399 aaPredicted RBP13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 LPIN2Q92539 896 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 KLHL29Q96CT2 875 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 PLVAPQ9BX97 442 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 CTTNBP2NLQ9P2B4 639 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 SAP30BPQ9UHR5 308 aaKnown RBP13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 NIP7Q9Y221 180 aaKnown RBP eCLIP13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 BAG3O95817 575 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 EEF2P13639 858 aaKnown RBP13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 TNFAIP3P21580 790 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 ALDH3A1P30838 453 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 PRPHP41219 470 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 SIRT1Q96EB6 747 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 TEX13AQ9BXU3 409 aaPredicted RBP13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 MTUS1Q9ULD2 1270 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 ABCC3O15438 1527 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 PPP1R2P41236 205 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 BCAMP50895 628 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 DNAJC10Q8IXB1 793 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 KLC4Q9NSK0 619 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 FAM205CA6NFA0 338 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 FLOT1O75955 427 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 GOLGA8HP0CJ92 632 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 PRCPP42785 496 aa13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 NONOQ15233 471 aaKnown RBP eCLIP13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 MB21D2Q8IYB1 491 aaPredicted RBP13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 TPX2Q9ULW0 747 aaKnown RBP13.8□□□□□ -0.2
SSX2IP-201ENST00000342203 SCG2P13521 617 aa13.79□□□□□ -0.2
SSX2IP-201ENST00000342203 STX2P32856 288 aa13.79□□□□□ -0.2
SSX2IP-201ENST00000342203 ADAMTS1Q9UHI8 967 aa13.79□□□□□ -0.2
SSX2IP-201ENST00000342203 PACSIN2Q9UNF0 486 aaPredicted RBP13.79□□□□□ -0.2
SSX2IP-201ENST00000342203 CYP2D7A0A087X1C5 515 aa13.79□□□□□ -0.2
SSX2IP-201ENST00000342203 UBE2Q2LH0YL09 131 aa13.79□□□□□ -0.2
SSX2IP-201ENST00000342203 LTKP29376 864 aa13.79□□□□□ -0.2
SSX2IP-201ENST00000342203 TFAP4Q01664 338 aa13.79□□□□□ -0.2
SSX2IP-201ENST00000342203 P2RX5Q93086 422 aa13.79□□□□□ -0.2
SSX2IP-201ENST00000342203 ZSCAN10Q96SZ4 725 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms