RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 ABCB4P21439 1286 aa16.38■□□□□ 0.21
RRP1B-201ENST00000340648 CYB5R4Q7L1T6 521 aa16.38■□□□□ 0.21
RRP1B-201ENST00000340648 SERPINA10Q9UK55 444 aa16.38■□□□□ 0.21
RRP1B-201ENST00000340648 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.38■□□□□ 0.21
RRP1B-201ENST00000340648 ATP5DP30049 168 aa16.38■□□□□ 0.21
RRP1B-201ENST00000340648 LIFRP42702 1097 aa16.38■□□□□ 0.21
RRP1B-201ENST00000340648 TCP11X2Q5H9J9 407 aa16.38■□□□□ 0.21
RRP1B-201ENST00000340648 ADAT2Q7Z6V5 191 aaKnown RBP16.38■□□□□ 0.21
RRP1B-201ENST00000340648 NAP1L4Q99733 375 aaKnown RBP16.38■□□□□ 0.21
RRP1B-201ENST00000340648 ASIC3Q9UHC3 531 aa16.38■□□□□ 0.21
RRP1B-201ENST00000340648 ADGRG1Q9Y653 693 aa16.38■□□□□ 0.21
RRP1B-201ENST00000340648 PLEKHG1Q9ULL1 1385 aa16.38■□□□□ 0.21
RRP1B-201ENST00000340648 ALKQ9UM73 1620 aa16.38■□□□□ 0.21
RRP1B-201ENST00000340648 SOS2Q07890 1332 aaPredicted RBP16.38■□□□□ 0.21
RRP1B-201ENST00000340648 P2RX5Q93086 422 aa16.38■□□□□ 0.21
RRP1B-201ENST00000340648 LZTS2Q9BRK4 669 aa16.38■□□□□ 0.21
RRP1B-201ENST00000340648 BTG4Q9NY30 223 aa16.38■□□□□ 0.21
RRP1B-201ENST00000340648 TAOK1Q7L7X3 1001 aa16.38■□□□□ 0.21
RRP1B-201ENST00000340648 MB21D2Q8IYB1 491 aaPredicted RBP16.38■□□□□ 0.21
RRP1B-201ENST00000340648 RGS16O15492 202 aaPredicted RBP16.37■□□□□ 0.21
RRP1B-201ENST00000340648 CYP2C19P33261 490 aa16.37■□□□□ 0.21
RRP1B-201ENST00000340648 GKAP1Q5VSY0 366 aaPredicted RBP16.37■□□□□ 0.21
RRP1B-201ENST00000340648 GSPT2Q8IYD1 628 aaKnown RBP16.37■□□□□ 0.21
RRP1B-201ENST00000340648 CCDC105Q8IYK2 499 aa16.37■□□□□ 0.21
RRP1B-201ENST00000340648 AMFRQ9UKV5 643 aa16.37■□□□□ 0.21
RRP1B-201ENST00000340648 FMNL3Q8IVF7 1028 aa16.37■□□□□ 0.21
RRP1B-201ENST00000340648 UHMK1Q8TAS1 419 aaKnown RBP16.37■□□□□ 0.21
RRP1B-201ENST00000340648 GDAQ9Y2T3 454 aa16.37■□□□□ 0.21
RRP1B-201ENST00000340648 NEK8Q86SG6 692 aa16.37■□□□□ 0.21
RRP1B-201ENST00000340648 FUCA2Q9BTY2 467 aa16.37■□□□□ 0.21
RRP1B-201ENST00000340648 RAB17Q9H0T7 212 aa16.37■□□□□ 0.21
RRP1B-201ENST00000340648 ABHD10Q9NUJ1 306 aa16.37■□□□□ 0.21
RRP1B-201ENST00000340648 AK9Q5TCS8 1911 aa16.37■□□□□ 0.21
RRP1B-201ENST00000340648 GCNT3O95395 438 aa16.37■□□□□ 0.21
RRP1B-201ENST00000340648 CDC27P30260 824 aa16.37■□□□□ 0.21
RRP1B-201ENST00000340648 PCK1P35558 622 aa16.37■□□□□ 0.21
RRP1B-201ENST00000340648 APBA1Q02410 837 aa16.37■□□□□ 0.21
RRP1B-201ENST00000340648 ATG3Q9NT62 314 aa16.37■□□□□ 0.21
RRP1B-201ENST00000340648 PCDHB13Q9Y5F0 798 aa16.37■□□□□ 0.21
RRP1B-201ENST00000340648 ST5P78524 1137 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 NYAP1Q6ZVC0 841 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 VSIG1Q86XK7 387 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 PLCB1Q9NQ66 1216 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 PKD2L1Q9P0L9 805 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 EIF3CLB5ME19 914 aaKnown RBP16.36■□□□□ 0.21
RRP1B-201ENST00000340648 MCAMP43121 646 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 TRAPPC10P48553 1259 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 ARHGAP44Q17R89 818 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 NAA35Q5VZE5 725 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 DHTKD1Q96HY7 919 aaPredicted RBP16.36■□□□□ 0.21
RRP1B-201ENST00000340648 EIF3CQ99613 913 aaKnown RBP16.36■□□□□ 0.21
RRP1B-201ENST00000340648 TACO1Q9BSH4 297 aaKnown RBP16.36■□□□□ 0.21
RRP1B-201ENST00000340648 H7C1W4 665 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 RIMBP2O15034 1052 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 MAGEA9P43362 315 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 NNTQ13423 1086 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 ANKRD42Q8N9B4 389 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 EFCC1Q9HA90 598 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 RIPOR2Q9Y4F9 1068 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 ALDH3A1P30838 453 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 ZBED6P86452 979 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 GPBP1Q86WP2 473 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 RETREG2Q8NC44 543 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 MRPL44Q9H9J2 332 aaKnown RBP16.36■□□□□ 0.21
RRP1B-201ENST00000340648 DNM3Q9UQ16 869 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 STK38LQ9Y2H1 464 aa16.36■□□□□ 0.21
RRP1B-201ENST00000340648 NEDD4P46934 1319 aa16.35■□□□□ 0.21
RRP1B-201ENST00000340648 MAP3K15Q6ZN16 1313 aa16.35■□□□□ 0.21
RRP1B-201ENST00000340648 KLRF2D3W0D1 207 aa16.35■□□□□ 0.21
RRP1B-201ENST00000340648 GNA14O95837 355 aa16.35■□□□□ 0.21
RRP1B-201ENST00000340648 CCDC87Q9NVE4 849 aa16.35■□□□□ 0.21
RRP1B-201ENST00000340648 CEP152O94986 1710 aa16.35■□□□□ 0.21
RRP1B-201ENST00000340648 FTCDO95954 541 aa16.35■□□□□ 0.21
RRP1B-201ENST00000340648 KRT5P13647 590 aa16.35■□□□□ 0.21
RRP1B-201ENST00000340648 EIF4A3P38919 411 aaKnown RBP16.35■□□□□ 0.21
RRP1B-201ENST00000340648 CHRNDQ07001 517 aa16.35■□□□□ 0.21
RRP1B-201ENST00000340648 METTL16Q86W50 562 aaKnown RBP16.35■□□□□ 0.21
RRP1B-201ENST00000340648 MB21D1Q8N884 522 aa16.35■□□□□ 0.21
RRP1B-201ENST00000340648 EXOSC10Q01780 885 aaKnown RBP16.35■□□□□ 0.21
RRP1B-201ENST00000340648 CUL4BQ13620 913 aa16.35■□□□□ 0.21
RRP1B-201ENST00000340648 OXER1Q8TDS5 423 aa16.35■□□□□ 0.21
RRP1B-201ENST00000340648 SYNCQ9H7C4 482 aa16.35■□□□□ 0.21
RRP1B-201ENST00000340648 FAM184BQ9ULE4 1060 aa16.35■□□□□ 0.21
RRP1B-201ENST00000340648 XRCC5P13010 732 aaKnown RBP16.35■□□□□ 0.21
RRP1B-201ENST00000340648 DYNLL1P63167 89 aaKnown RBP16.35■□□□□ 0.21
RRP1B-201ENST00000340648 FNBP4Q8N3X1 1017 aaPredicted RBP16.35■□□□□ 0.21
RRP1B-201ENST00000340648 CYP2D7A0A087X1C5 515 aa16.34■□□□□ 0.21
RRP1B-201ENST00000340648 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.34■□□□□ 0.21
RRP1B-201ENST00000340648 LRRC41Q15345 812 aa16.34■□□□□ 0.21
RRP1B-201ENST00000340648 ZNF365Q70YC5 407 aa16.34■□□□□ 0.21
RRP1B-201ENST00000340648 EYA3Q99504 573 aa16.34■□□□□ 0.21
RRP1B-201ENST00000340648 PANK4Q9NVE7 773 aa16.34■□□□□ 0.21
RRP1B-201ENST00000340648 ZNF609O15014 1411 aa16.34■□□□□ 0.21
RRP1B-201ENST00000340648 NRKQ7Z2Y5 1582 aa16.34■□□□□ 0.21
RRP1B-201ENST00000340648 GGCXP38435 758 aa16.34■□□□□ 0.21
RRP1B-201ENST00000340648 MAEAQ7L5Y9 396 aa16.34■□□□□ 0.21
RRP1B-201ENST00000340648 CROCCP2Q86T23 111 aa16.34■□□□□ 0.21
RRP1B-201ENST00000340648 CCDC170Q8IYT3 715 aa16.34■□□□□ 0.21
RRP1B-201ENST00000340648 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.34■□□□□ 0.211e-6■■■□□ 15.8
RRP1B-201ENST00000340648 HDAC6Q9UBN7 1215 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms