RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 USP17L17D6RBQ6 530 aa15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 USP17L19D6RCP7 530 aa15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 USP17L20D6RJB6 530 aa15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 hCG_1984214I3L0E3 225 aa15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 NAPAP54920 295 aa15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 USP17L24Q0WX57 530 aa15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 NBR1Q14596 966 aa15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 SPRYD7Q5W111 196 aa15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 CCDC174Q6PII3 467 aa15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 DIS3L2Q8IYB7 885 aaKnown RBP15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 ZNF713Q8N859 430 aaPredicted RBP15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 BTBD18B2RXH4 712 aa15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 NLRP5P59047 1200 aa15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 FAM173BQ6P4H8 233 aa15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 CCDC148Q8NFR7 591 aa15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 ATG4CQ96DT6 458 aa15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 MS4A4AQ96JQ5 239 aa15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 AMNQ9BXJ7 453 aa15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 PCDHA1Q9Y5I3 950 aa15.36■□□□□ 0.05
GTF2F2-201ENST00000340473 USH1GQ495M9 461 aa15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 FBXO11Q86XK2 927 aa15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 AGTPBP1Q9UPW5 1226 aa15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 TLL2Q9Y6L7 1015 aa15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 VWA5AO00534 786 aa15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 ZBTB48P10074 688 aaPredicted RBP15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 U2AF2P26368 475 aaKnown RBP eCLIP15.35■□□□□ 0.056e-6■■■■□ 22.5
GTF2F2-201ENST00000340473 HOXA7P31268 230 aaPredicted RBP15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 DSG3P32926 999 aa15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 NR5A1Q13285 461 aa15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 COG2Q14746 738 aa15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 SAFBQ15424 915 aaKnown RBP eCLIP15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 GPAT2Q6NUI2 795 aa15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 FASTKD5Q7L8L6 764 aaKnown RBP15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 RASAL3Q86YV0 1011 aa15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 CCDC12Q8WUD4 166 aaPredicted RBP15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 ZMYND12Q9H0C1 365 aa15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 ZSCAN16Q9H4T2 348 aaPredicted RBP15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 SLC38A10Q9HBR0 1119 aa15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 ZNF536O15090 1300 aa15.35■□□□□ 0.05
GTF2F2-201ENST00000340473 SMCO2A6NFE2 343 aa15.34■□□□□ 0.05
GTF2F2-201ENST00000340473 KRT2P35908 639 aa15.34■□□□□ 0.05
GTF2F2-201ENST00000340473 ZNF157P51786 506 aaPredicted RBP15.34■□□□□ 0.05
GTF2F2-201ENST00000340473 GTF2A2P52657 109 aa15.34■□□□□ 0.05
GTF2F2-201ENST00000340473 FSTL1Q12841 308 aa15.34■□□□□ 0.05
GTF2F2-201ENST00000340473 PPP1R18Q6NYC8 613 aa15.34■□□□□ 0.05
GTF2F2-201ENST00000340473 FAM177A1Q8N128 213 aaPredicted RBP15.34■□□□□ 0.05
GTF2F2-201ENST00000340473 PCDHA4Q9UN74 947 aa15.34■□□□□ 0.05
GTF2F2-201ENST00000340473 ADAMTS5Q9UNA0 930 aa15.34■□□□□ 0.05
GTF2F2-201ENST00000340473 SMCHD1A6NHR9 2005 aa15.34■□□□□ 0.05
GTF2F2-201ENST00000340473 SPDYE16A6NNV3 312 aaPredicted RBP15.33■□□□□ 0.05
GTF2F2-201ENST00000340473 CALML3P27482 149 aa15.33■□□□□ 0.05
GTF2F2-201ENST00000340473 GNL2Q13823 731 aaKnown RBP15.33■□□□□ 0.05
GTF2F2-201ENST00000340473 RGMBQ6NW40 437 aa15.33■□□□□ 0.05
GTF2F2-201ENST00000340473 AGBL1Q96MI9 1066 aa15.33■□□□□ 0.05
GTF2F2-201ENST00000340473 FOXP1Q9H334 677 aaPredicted RBP15.33■□□□□ 0.05
GTF2F2-201ENST00000340473 COL11A1P12107 1806 aaPredicted RBP15.33■□□□□ 0.04
GTF2F2-201ENST00000340473 ESYT2A0FGR8 921 aa15.33■□□□□ 0.04
GTF2F2-201ENST00000340473 TMEM88BA6NKF7 163 aa15.33■□□□□ 0.04
GTF2F2-201ENST00000340473 CETPP11597 493 aa15.33■□□□□ 0.04
GTF2F2-201ENST00000340473 BLIDQ8IZY5 108 aa15.33■□□□□ 0.04
GTF2F2-201ENST00000340473 DAGLBQ8NCG7 672 aa15.33■□□□□ 0.04
GTF2F2-201ENST00000340473 REPS2Q8NFH8 660 aa15.33■□□□□ 0.04
GTF2F2-201ENST00000340473 BRI3BPQ8WY22 251 aa15.33■□□□□ 0.04
GTF2F2-201ENST00000340473 TNFRSF25Q93038 417 aa15.33■□□□□ 0.04
GTF2F2-201ENST00000340473 BRMS1Q9HCU9 246 aa15.33■□□□□ 0.04
GTF2F2-201ENST00000340473 ABT1Q9ULW3 272 aaKnown RBP15.33■□□□□ 0.04
GTF2F2-201ENST00000340473 MYPNQ86TC9 1320 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 CCL15-CCL14A0A0B4J2E2 113 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 M0R2N6 131 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 ZBED4O75132 1171 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 ICAM1P05362 532 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 DNM1Q05193 864 aaKnown RBP15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 CCL15Q16663 113 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 NOM1Q5C9Z4 860 aaKnown RBP15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 EARS2Q5JPH6 523 aaKnown RBP15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 POTEEQ6S8J3 1075 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 BRAPQ7Z569 592 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 NOSTRINQ8IVI9 506 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 CPXCR1Q8N123 301 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 RASGRP4Q8TDF6 673 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 ASCC2Q9H1I8 757 aaPredicted RBP15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 RAVER2Q9HCJ3 691 aaKnown RBP15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 C6orf50Q9HD87 102 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 HOXC10Q9NYD6 342 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 ATP6V1DQ9Y5K8 247 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 MYH15Q9Y2K3 1946 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 BAG4O95429 457 aaKnown RBP15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 ADCY7P51828 1080 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 GALNT17Q6IS24 598 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 CLEC17AQ6ZS10 378 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 P2RX7Q99572 595 aaKnown RBP15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 RIC8AQ9NPQ8 531 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 CCPG1Q9ULG6 757 aa15.32■□□□□ 0.04
GTF2F2-201ENST00000340473 FAM205CA6NFA0 338 aa15.31■□□□□ 0.04
GTF2F2-201ENST00000340473 OPLAHO14841 1288 aa15.31■□□□□ 0.04
GTF2F2-201ENST00000340473 FDX1P10109 184 aa15.31■□□□□ 0.04
GTF2F2-201ENST00000340473 GNA11P29992 359 aa15.31■□□□□ 0.04
GTF2F2-201ENST00000340473 IRX3P78415 501 aaPredicted RBP15.31■□□□□ 0.04
GTF2F2-201ENST00000340473 PCDHA6Q9UN73 950 aa15.31■□□□□ 0.04
GTF2F2-201ENST00000340473 CTDP1Q9Y5B0 961 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms