RNA–Protein interactions for RNA: ENST00000340434.4

PTAR1-201, Transcript of protein prenyltransferase alpha subunit repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTAR1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAR1-201ENST00000340434 CTR9Q6PD62 1173 aa13□□□□□ -0.33
PTAR1-201ENST00000340434 ARMCX2Q7L311 632 aa13□□□□□ -0.33
PTAR1-201ENST00000340434 AMOTL1Q8IY63 956 aa13□□□□□ -0.33
PTAR1-201ENST00000340434 ANKRD35Q8N283 1001 aa13□□□□□ -0.33
PTAR1-201ENST00000340434 FGD4Q96M96 766 aa13□□□□□ -0.33
PTAR1-201ENST00000340434 UPF3AQ9H1J1 476 aaKnown RBP13□□□□□ -0.33
PTAR1-201ENST00000340434 ABHD16BQ9H3Z7 469 aa13□□□□□ -0.33
PTAR1-201ENST00000340434 RAVER2Q9HCJ3 691 aaKnown RBP13□□□□□ -0.33
PTAR1-201ENST00000340434 XIRP2A4UGR9 3374 aa13□□□□□ -0.33
PTAR1-201ENST00000340434 ZNFX1Q9P2E3 1918 aaKnown RBP13□□□□□ -0.33
PTAR1-201ENST00000340434 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.99□□□□□ -0.33
PTAR1-201ENST00000340434 F5H6K3 240 aa12.99□□□□□ -0.33
PTAR1-201ENST00000340434 CD4P01730 458 aa12.99□□□□□ -0.33
PTAR1-201ENST00000340434 BMP1P13497 986 aa12.99□□□□□ -0.33
PTAR1-201ENST00000340434 PTGS1P23219 599 aa12.99□□□□□ -0.33
PTAR1-201ENST00000340434 KLRC3Q07444 240 aa12.99□□□□□ -0.33
PTAR1-201ENST00000340434 CXCL17Q6UXB2 119 aa12.99□□□□□ -0.33
PTAR1-201ENST00000340434 NOL8Q76FK4 1167 aaKnown RBP12.99□□□□□ -0.33
PTAR1-201ENST00000340434 CCDC144CPQ8IYA2 1237 aa12.99□□□□□ -0.33
PTAR1-201ENST00000340434 PRPF38AQ8NAV1 312 aaKnown RBP12.99□□□□□ -0.33
PTAR1-201ENST00000340434 KIFC2Q96AC6 838 aa12.99□□□□□ -0.33
PTAR1-201ENST00000340434 BOLA2Q9H3K6 86 aa12.99□□□□□ -0.33
PTAR1-201ENST00000340434 HIPK3Q9H422 1215 aa12.99□□□□□ -0.33
PTAR1-201ENST00000340434 PAG1Q9NWQ8 432 aa12.99□□□□□ -0.33
PTAR1-201ENST00000340434 CTDP1Q9Y5B0 961 aaPredicted RBP12.99□□□□□ -0.33
PTAR1-201ENST00000340434 SLC4A4Q9Y6R1 1079 aa12.99□□□□□ -0.33
PTAR1-201ENST00000340434 ZBED4O75132 1171 aa12.98□□□□□ -0.33
PTAR1-201ENST00000340434 NDUFB10O96000 172 aa12.98□□□□□ -0.33
PTAR1-201ENST00000340434 IFIT2P09913 472 aaKnown RBP12.98□□□□□ -0.33
PTAR1-201ENST00000340434 KCNQ1P51787 676 aa12.98□□□□□ -0.33
PTAR1-201ENST00000340434 CNTN2Q02246 1040 aa12.98□□□□□ -0.33
PTAR1-201ENST00000340434 SKIV2LQ15477 1246 aaKnown RBP12.98□□□□□ -0.33
PTAR1-201ENST00000340434 PPP2R2DQ66LE6 453 aa12.98□□□□□ -0.33
PTAR1-201ENST00000340434 ZNF467Q7Z7K2 595 aaPredicted RBP12.98□□□□□ -0.33
PTAR1-201ENST00000340434 CLASRPQ8N2M8 674 aaKnown RBP12.98□□□□□ -0.33
PTAR1-201ENST00000340434 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.98□□□□□ -0.33
PTAR1-201ENST00000340434 DDRGK1Q96HY6 314 aa12.98□□□□□ -0.33
PTAR1-201ENST00000340434 TRPV6Q9H1D0 765 aa12.98□□□□□ -0.33
PTAR1-201ENST00000340434 TSPYL2Q9H2G4 693 aaPredicted RBP12.98□□□□□ -0.33
PTAR1-201ENST00000340434 MTIF3Q9H2K0 278 aaKnown RBP12.98□□□□□ -0.33
PTAR1-201ENST00000340434 NAV1Q8NEY1 1877 aa12.98□□□□□ -0.33
PTAR1-201ENST00000340434 RFXAPO00287 272 aa12.97□□□□□ -0.33
PTAR1-201ENST00000340434 TNFAIP2Q03169 654 aa12.97□□□□□ -0.33
PTAR1-201ENST00000340434 HSP90AB4PQ58FF6 505 aa12.97□□□□□ -0.33
PTAR1-201ENST00000340434 SLC43A3Q8NBI5 491 aa12.97□□□□□ -0.33
PTAR1-201ENST00000340434 KATNBL1Q9H079 304 aa12.97□□□□□ -0.33
PTAR1-201ENST00000340434 HOMER2Q9NSB8 354 aa12.97□□□□□ -0.33
PTAR1-201ENST00000340434 CLIP2Q9UDT6 1046 aa12.97□□□□□ -0.33
PTAR1-201ENST00000340434 DDX49Q9Y6V7 483 aaKnown RBP12.97□□□□□ -0.33
PTAR1-201ENST00000340434 ASTN1O14525 1302 aa12.97□□□□□ -0.33
PTAR1-201ENST00000340434 GRIN2DO15399 1336 aa12.97□□□□□ -0.33
PTAR1-201ENST00000340434 ATP2A1O14983 1001 aa12.96□□□□□ -0.33
PTAR1-201ENST00000340434 RASA1P20936 1047 aa12.96□□□□□ -0.33
PTAR1-201ENST00000340434 ITGA7Q13683 1181 aa12.96□□□□□ -0.33
PTAR1-201ENST00000340434 KIF1BPQ96EK5 621 aa12.96□□□□□ -0.33
PTAR1-201ENST00000340434 SCLYQ96I15 445 aa12.96□□□□□ -0.33
PTAR1-201ENST00000340434 C1QTNF1Q9BXJ1 281 aa12.96□□□□□ -0.33
PTAR1-201ENST00000340434 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.96□□□□□ -0.332e-7■■■□□ 15.8
PTAR1-201ENST00000340434 PUS7LQ9H0K6 701 aaKnown RBP12.96□□□□□ -0.33
PTAR1-201ENST00000340434 WNT8AQ9H1J5 351 aa12.96□□□□□ -0.33
PTAR1-201ENST00000340434 CERS4Q9HA82 394 aa12.96□□□□□ -0.33
PTAR1-201ENST00000340434 NYAP2Q9P242 653 aa12.96□□□□□ -0.33
PTAR1-201ENST00000340434 SLC4A7Q9Y6M7 1214 aa12.96□□□□□ -0.33
PTAR1-201ENST00000340434 PLXNA1Q9UIW2 1896 aa12.96□□□□□ -0.33
PTAR1-201ENST00000340434 ZBBXA8MT70 800 aa12.96□□□□□ -0.34
PTAR1-201ENST00000340434 DYNC1LI2O43237 492 aaPredicted RBP12.96□□□□□ -0.34
PTAR1-201ENST00000340434 PSMC6P62333 389 aa12.96□□□□□ -0.34
PTAR1-201ENST00000340434 PANK1Q8TE04 598 aa12.96□□□□□ -0.34
PTAR1-201ENST00000340434 VWCEQ96DN2 955 aa12.96□□□□□ -0.34
PTAR1-201ENST00000340434 NOC4LQ9BVI4 516 aaKnown RBP12.96□□□□□ -0.34
PTAR1-201ENST00000340434 EPHX3Q9H6B9 360 aa12.96□□□□□ -0.34
PTAR1-201ENST00000340434 MKNK2Q9HBH9 465 aa12.96□□□□□ -0.34
PTAR1-201ENST00000340434 SLC38A10Q9HBR0 1119 aa12.96□□□□□ -0.34
PTAR1-201ENST00000340434 COL11A1P12107 1806 aaPredicted RBP12.95□□□□□ -0.34
PTAR1-201ENST00000340434 REV3LO60673 3130 aa12.95□□□□□ -0.34
PTAR1-201ENST00000340434 B4GALT4O60513 344 aa12.95□□□□□ -0.34
PTAR1-201ENST00000340434 ABCB7O75027 752 aa12.95□□□□□ -0.34
PTAR1-201ENST00000340434 NKX3-2P78367 333 aa12.95□□□□□ -0.34
PTAR1-201ENST00000340434 UBE3CQ15386 1083 aa12.95□□□□□ -0.34
PTAR1-201ENST00000340434 FSCN1Q16658 493 aaKnown RBP12.95□□□□□ -0.34
PTAR1-201ENST00000340434 TMEM63BQ5T3F8 832 aa12.95□□□□□ -0.34
PTAR1-201ENST00000340434 KRT40Q6A162 431 aa12.95□□□□□ -0.34
PTAR1-201ENST00000340434 TLK2Q86UE8 772 aa12.95□□□□□ -0.34
PTAR1-201ENST00000340434 CHST13Q8NET6 341 aa12.95□□□□□ -0.34
PTAR1-201ENST00000340434 CHMP4CQ96CF2 233 aa12.95□□□□□ -0.34
PTAR1-201ENST00000340434 PDGFCQ9NRA1 345 aa12.95□□□□□ -0.34
PTAR1-201ENST00000340434 FBXO40Q9UH90 709 aa12.95□□□□□ -0.34
PTAR1-201ENST00000340434 GNEQ9Y223 722 aaKnown RBP12.95□□□□□ -0.34
PTAR1-201ENST00000340434 PCDHA11Q9Y5I1 949 aa12.95□□□□□ -0.34
PTAR1-201ENST00000340434 ZBED9Q6R2W3 1325 aa12.94□□□□□ -0.34
PTAR1-201ENST00000340434 SOWAHBA6NEL2 793 aa12.94□□□□□ -0.34
PTAR1-201ENST00000340434 MINDY4BA8MYZ0 360 aa12.94□□□□□ -0.34
PTAR1-201ENST00000340434 PRDM1O75626 825 aa12.94□□□□□ -0.34
PTAR1-201ENST00000340434 ATP2A2P16615 1042 aaKnown RBP12.94□□□□□ -0.34
PTAR1-201ENST00000340434 SMPD1P17405 629 aa12.94□□□□□ -0.34
PTAR1-201ENST00000340434 ATP5JP18859 108 aa12.94□□□□□ -0.34
PTAR1-201ENST00000340434 TTLL4Q14679 1199 aa12.94□□□□□ -0.34
PTAR1-201ENST00000340434 AAK1Q2M2I8 961 aa12.94□□□□□ -0.34
PTAR1-201ENST00000340434 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.94□□□□□ -0.34
PTAR1-201ENST00000340434 EEPD1Q7L9B9 569 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms