RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 KIF28PB7ZC32 967 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 PTPRAP18433 802 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 BACE1P56817 501 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 ARMC9Q7Z3E5 817 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 SAMD7Q7Z3H4 446 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 LDHDQ86WU2 507 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 KRI1Q8N9T8 703 aaKnown RBP8.2□□□□□ -1.1
NUP43-201ENST00000340413 PRPF38AQ8NAV1 312 aaKnown RBP8.2□□□□□ -1.1
NUP43-201ENST00000340413 PCDHA6Q9UN73 950 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 PCDHA8Q9Y5H6 950 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 CIITAP33076 1130 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 FAM160A1Q05DH4 1040 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 STK38Q15208 465 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 CCDC96Q2M329 555 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 LDLRAD1Q5T700 205 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 RESP18Q5W5W9 173 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 FBXO11Q86XK2 927 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 ANKRD13AQ8IZ07 590 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 MRPS27Q92552 414 aaKnown RBP8.2□□□□□ -1.1
NUP43-201ENST00000340413 USP28Q96RU2 1077 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 AFG3L2Q9Y4W6 797 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 DDX49Q9Y6V7 483 aaKnown RBP8.2□□□□□ -1.1
NUP43-201ENST00000340413 SPDYE5A6NIY4 337 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 PRPF40AO75400 957 aaKnown RBP8.2□□□□□ -1.1
NUP43-201ENST00000340413 ICAM1P05362 532 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 EPS15P42566 896 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 NAPAP54920 295 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 GPR162Q16538 588 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 REXO1Q8N1G1 1221 aaKnown RBP8.2□□□□□ -1.1
NUP43-201ENST00000340413 LRRC47Q8N1G4 583 aaKnown RBP8.2□□□□□ -1.1
NUP43-201ENST00000340413 SLF1Q9BQI6 1058 aa8.2□□□□□ -1.1
NUP43-201ENST00000340413 HOOK1Q9UJC3 728 aaKnown RBP8.2□□□□□ -1.1
NUP43-201ENST00000340413 USP2O75604 605 aaPredicted RBP8.19□□□□□ -1.1
NUP43-201ENST00000340413 CDC37Q16543 378 aaPredicted RBP8.19□□□□□ -1.1
NUP43-201ENST00000340413 TTC38Q5R3I4 469 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 L1TD1Q5T7N2 865 aaKnown RBP8.19□□□□□ -1.1
NUP43-201ENST00000340413 ERO1BQ86YB8 467 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 PIGSQ96S52 555 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 TANGO6Q9C0B7 1094 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 CLSTN2Q9H4D0 955 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 CCDC194A0A1B0GVG4 234 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 STAM2O75886 525 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 RXRAP19793 462 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 Q4G0T1 1027 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 CCDC144CPQ8IYA2 1237 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 ENGASEQ8NFI3 743 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 CRYGNQ8WXF5 182 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 PPP1R9AQ9ULJ8 1098 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 PRR12Q9ULL5 1215 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 A0A1W2PRG0 241 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 GOLGA6L4A6NEF3 574 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 SMCO2A6NFE2 343 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 USP17L15C9J2P7 530 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 USP17L13C9JLJ4 530 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 USP17L11C9JVI0 530 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 USP17L18D6R9N7 530 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 USP17L22D6RA61 530 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 USP17L17D6RBQ6 530 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 USP17L19D6RCP7 530 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 USP17L20D6RJB6 530 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 USP17L24Q0WX57 530 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 UVSSAQ2YD98 709 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 AXDND1Q5T1B0 1012 aaPredicted RBP8.19□□□□□ -1.1
NUP43-201ENST00000340413 CCDC73Q6ZRK6 1079 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 GPT2Q8TD30 523 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 SHISA4Q96DD7 197 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 FAM13BQ9NYF5 915 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 VPS54Q9P1Q0 977 aa8.19□□□□□ -1.1
NUP43-201ENST00000340413 FBXO2Q9UK22 296 aaPredicted RBP8.19□□□□□ -1.1
NUP43-201ENST00000340413 RPTORQ8N122 1335 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 A0A0G2JLL6 359 aaPredicted RBP8.18□□□□□ -1.1
NUP43-201ENST00000340413 BTBD18B2RXH4 712 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 DDNO94850 711 aaPredicted RBP8.18□□□□□ -1.1
NUP43-201ENST00000340413 GDF11O95390 407 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 TOB1P50616 345 aaPredicted RBP8.18□□□□□ -1.1
NUP43-201ENST00000340413 FXR2P51116 673 aaKnown RBP eCLIP8.18□□□□□ -1.1
NUP43-201ENST00000340413 HSD17B4P51659 736 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 IRF5Q13568 498 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 PDIA5Q14554 519 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 QRICH1Q2TAL8 776 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 CNNM4Q6P4Q7 775 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 FASTKD5Q7L8L6 764 aaKnown RBP8.18□□□□□ -1.1
NUP43-201ENST00000340413 PRRT2Q7Z6L0 340 aaPredicted RBP8.18□□□□□ -1.1
NUP43-201ENST00000340413 NEK8Q86SG6 692 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 CDCA5Q96FF9 252 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 SLC38A10Q9HBR0 1119 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 TMOD4Q9NZQ9 345 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 CSADQ9Y600 493 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 LRRC37A2A6NM11 1700 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 FSD2A1L4K1 749 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 SREBF1P36956 1147 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 NBPF12Q5TAG4 269 aaPredicted RBP8.18□□□□□ -1.1
NUP43-201ENST00000340413 C4orf32Q8N8J7 132 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 SNCAIPQ9Y6H5 919 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 ZBED4O75132 1171 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 JAG1P78504 1218 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 HEATR3Q7Z4Q2 680 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 HHIPL1Q96JK4 782 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 RAB34Q9BZG1 259 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 CCSER1Q9C0I3 900 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms