RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 DNAJC25-GNG10A0A024R161 153 aa17.15■□□□□ 0.34
ERCC1-203ENST00000340192 NEFLP07196 543 aa17.15■□□□□ 0.34
ERCC1-203ENST00000340192 SNHG28P0DPA3 235 aa17.15■□□□□ 0.34
ERCC1-203ENST00000340192 MNX1P50219 401 aaPredicted RBP17.15■□□□□ 0.34
ERCC1-203ENST00000340192 ZNF543Q08ER8 600 aa17.15■□□□□ 0.34
ERCC1-203ENST00000340192 PRAMEF19Q5SWL8 479 aa17.15■□□□□ 0.34
ERCC1-203ENST00000340192 SYDE2Q5VT97 1194 aa17.15■□□□□ 0.34
ERCC1-203ENST00000340192 ANKRD35Q8N283 1001 aa17.15■□□□□ 0.34
ERCC1-203ENST00000340192 PNMA1Q8ND90 353 aa17.15■□□□□ 0.34
ERCC1-203ENST00000340192 ANKS1AQ92625 1134 aa17.15■□□□□ 0.34
ERCC1-203ENST00000340192 UBAC1Q9BSL1 405 aa17.15■□□□□ 0.34
ERCC1-203ENST00000340192 HTATIP2Q9BUP3 242 aa17.15■□□□□ 0.34
ERCC1-203ENST00000340192 KAT14Q9H8E8 782 aa17.15■□□□□ 0.34
ERCC1-203ENST00000340192 DDX20Q9UHI6 824 aaKnown RBP17.15■□□□□ 0.34
ERCC1-203ENST00000340192 TAF6LQ9Y6J9 622 aa17.15■□□□□ 0.34
ERCC1-203ENST00000340192 ALPK3Q96L96 1907 aa17.15■□□□□ 0.34
ERCC1-203ENST00000340192 TRDNQ13061 729 aa17.14■□□□□ 0.33
ERCC1-203ENST00000340192 KIAA1211Q6ZU35 1233 aa17.14■□□□□ 0.33
ERCC1-203ENST00000340192 CYB5R4Q7L1T6 521 aa17.14■□□□□ 0.33
ERCC1-203ENST00000340192 NECAB2Q7Z6G3 386 aa17.14■□□□□ 0.33
ERCC1-203ENST00000340192 DPF3Q92784 378 aa17.14■□□□□ 0.33
ERCC1-203ENST00000340192 TRERF1Q96PN7 1200 aa17.14■□□□□ 0.33
ERCC1-203ENST00000340192 TINF2Q9BSI4 451 aa17.14■□□□□ 0.33
ERCC1-203ENST00000340192 ESYT1Q9BSJ8 1104 aa17.14■□□□□ 0.33
ERCC1-203ENST00000340192 RANBP17Q9H2T7 1088 aaKnown RBP17.14■□□□□ 0.33
ERCC1-203ENST00000340192 ACAD9Q9H845 621 aa17.14■□□□□ 0.33
ERCC1-203ENST00000340192 RNF146Q9NTX7 359 aa17.14■□□□□ 0.33
ERCC1-203ENST00000340192 RBM8AQ9Y5S9 174 aaKnown RBP17.14■□□□□ 0.33
ERCC1-203ENST00000340192 MSCO60682 206 aa17.13■□□□□ 0.33
ERCC1-203ENST00000340192 ICAM1P05362 532 aa17.13■□□□□ 0.33
ERCC1-203ENST00000340192 GOLGA8HP0CJ92 632 aa17.13■□□□□ 0.33
ERCC1-203ENST00000340192 ALAS1P13196 640 aa17.13■□□□□ 0.33
ERCC1-203ENST00000340192 TKFCQ3LXA3 575 aa17.13■□□□□ 0.33
ERCC1-203ENST00000340192 GPATCH4Q5T3I0 446 aaKnown RBP17.13■□□□□ 0.33
ERCC1-203ENST00000340192 CCPG1Q9ULG6 757 aa17.13■□□□□ 0.33
ERCC1-203ENST00000340192 MCM3APO60318 1980 aa17.13■□□□□ 0.33
ERCC1-203ENST00000340192 E7EWF7 191 aa17.12■□□□□ 0.33
ERCC1-203ENST00000340192 SEPT4O43236 478 aa17.12■□□□□ 0.33
ERCC1-203ENST00000340192 TAL1P17542 331 aaPredicted RBP17.12■□□□□ 0.33
ERCC1-203ENST00000340192 IFIT1BQ5T764 474 aaKnown RBP17.12■□□□□ 0.33
ERCC1-203ENST00000340192 LSG1Q9H089 658 aaKnown RBP17.12■□□□□ 0.33
ERCC1-203ENST00000340192 NRBP1Q9UHY1 535 aa17.12■□□□□ 0.33
ERCC1-203ENST00000340192 LCTP09848 1927 aa17.11■□□□□ 0.33
ERCC1-203ENST00000340192 CNTN2Q02246 1040 aa17.11■□□□□ 0.33
ERCC1-203ENST00000340192 SEC23AQ15436 765 aa17.11■□□□□ 0.33
ERCC1-203ENST00000340192 MUM1L1Q5H9M0 696 aa17.11■□□□□ 0.33
ERCC1-203ENST00000340192 ANO1Q5XXA6 986 aa17.11■□□□□ 0.33
ERCC1-203ENST00000340192 MAMDC4Q6UXC1 1216 aa17.11■□□□□ 0.33
ERCC1-203ENST00000340192 STOX1Q6ZVD7 989 aa17.11■□□□□ 0.33
ERCC1-203ENST00000340192 ZNF467Q7Z7K2 595 aaPredicted RBP17.11■□□□□ 0.33
ERCC1-203ENST00000340192 RALYLQ86SE5 291 aaKnown RBP17.11■□□□□ 0.33
ERCC1-203ENST00000340192 MSL3Q8N5Y2 521 aaKnown RBP17.11■□□□□ 0.33
ERCC1-203ENST00000340192 NCOA7Q8NI08 942 aa17.11■□□□□ 0.33
ERCC1-203ENST00000340192 FGD4Q96M96 766 aa17.11■□□□□ 0.33
ERCC1-203ENST00000340192 C11orf49Q9H6J7 331 aa17.11■□□□□ 0.33
ERCC1-203ENST00000340192 A1CFQ9NQ94 594 aaKnown RBP17.11■□□□□ 0.33
ERCC1-203ENST00000340192 SYNGAP1Q96PV0 1343 aa17.11■□□□□ 0.33
ERCC1-203ENST00000340192 MYH6P13533 1939 aa17.11■□□□□ 0.33
ERCC1-203ENST00000340192 UBA5Q9GZZ9 404 aa17.1■□□□□ 0.33
ERCC1-203ENST00000340192 CPVLQ9H3G5 476 aa17.1■□□□□ 0.33
ERCC1-203ENST00000340192 CNPY2Q9Y2B0 182 aa17.1■□□□□ 0.33
ERCC1-203ENST00000340192 PFASO15067 1338 aa17.1■□□□□ 0.33
ERCC1-203ENST00000340192 H0YGN5 161 aa17.09■□□□□ 0.33
ERCC1-203ENST00000340192 POTEB2H3BUK9 544 aa17.09■□□□□ 0.33
ERCC1-203ENST00000340192 SNAI1O95863 264 aaPredicted RBP17.09■□□□□ 0.33
ERCC1-203ENST00000340192 ZNF865P0CJ78 1059 aaPredicted RBP17.09■□□□□ 0.33
ERCC1-203ENST00000340192 COL6A1P12109 1028 aa17.09■□□□□ 0.33
ERCC1-203ENST00000340192 ASPRV1Q53RT3 343 aa17.09■□□□□ 0.33
ERCC1-203ENST00000340192 CHST3Q7LGC8 479 aa17.09■□□□□ 0.33
ERCC1-203ENST00000340192 FAM133AQ8N9E0 248 aa17.09■□□□□ 0.33
ERCC1-203ENST00000340192 ANO2Q9NQ90 1003 aa17.09■□□□□ 0.33
ERCC1-203ENST00000340192 CYP39A1Q9NYL5 469 aa17.09■□□□□ 0.33
ERCC1-203ENST00000340192 IFIT3O14879 490 aaKnown RBP17.08■□□□□ 0.32
ERCC1-203ENST00000340192 EVI5O60447 810 aa17.08■□□□□ 0.32
ERCC1-203ENST00000340192 PARP1P09874 1014 aaKnown RBP17.08■□□□□ 0.32
ERCC1-203ENST00000340192 CASC1Q6TDU7 716 aa17.08■□□□□ 0.32
ERCC1-203ENST00000340192 NSMFQ6X4W1 530 aa17.08■□□□□ 0.32
ERCC1-203ENST00000340192 LRRC37A2A6NM11 1700 aa17.07■□□□□ 0.32
ERCC1-203ENST00000340192 ERICH2A1L162 156 aa17.07■□□□□ 0.32
ERCC1-203ENST00000340192 SOWAHBA6NEL2 793 aa17.07■□□□□ 0.32
ERCC1-203ENST00000340192 DNM1LO00429 736 aa17.07■□□□□ 0.32
ERCC1-203ENST00000340192 NFIBO00712 420 aa17.07■□□□□ 0.32
ERCC1-203ENST00000340192 SLC27A2O14975 620 aa17.07■□□□□ 0.32
ERCC1-203ENST00000340192 CDC45O75419 566 aa17.07■□□□□ 0.32
ERCC1-203ENST00000340192 ANTXR2P58335 489 aa17.07■□□□□ 0.32
ERCC1-203ENST00000340192 SART3Q15020 963 aaKnown RBP17.07■□□□□ 0.32
ERCC1-203ENST00000340192 GJC2Q5T442 439 aaPredicted RBP17.07■□□□□ 0.32
ERCC1-203ENST00000340192 ARMCX2Q7L311 632 aa17.07■□□□□ 0.32
ERCC1-203ENST00000340192 CCDC144CPQ8IYA2 1237 aa17.07■□□□□ 0.32
ERCC1-203ENST00000340192 MB21D2Q8IYB1 491 aaPredicted RBP17.07■□□□□ 0.32
ERCC1-203ENST00000340192 ADGRF4Q8IZF3 695 aa17.07■□□□□ 0.32
ERCC1-203ENST00000340192 ARRDC4Q8NCT1 418 aa17.07■□□□□ 0.32
ERCC1-203ENST00000340192 SENP2Q9HC62 589 aa17.07■□□□□ 0.32
ERCC1-203ENST00000340192 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.07■□□□□ 0.32
ERCC1-203ENST00000340192 PNMA2Q9UL42 364 aa17.07■□□□□ 0.32
ERCC1-203ENST00000340192 NR2E3Q9Y5X4 410 aa17.07■□□□□ 0.32
ERCC1-203ENST00000340192 CEP290O15078 2479 aa17.07■□□□□ 0.32
ERCC1-203ENST00000340192 WDR19Q8NEZ3 1342 aa17.06■□□□□ 0.32
ERCC1-203ENST00000340192 MYCNP04198 464 aaPredicted RBP17.06■□□□□ 0.32
ERCC1-203ENST00000340192 RARBP10826 455 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms