RNA–Protein interactions for RNA: ENST00000339530.8

LST1-203, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-203ENST00000339530 ADARB2Q9NS39 739 aaKnown RBP12.67□□□□□ -0.38
LST1-203ENST00000339530 POLR2AP24928 1970 aaKnown RBP12.67□□□□□ -0.38
LST1-203ENST00000339530 PASKQ96RG2 1323 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 SMCO2A6NFE2 343 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 TMEM88BA6NKF7 163 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 PHF20L1A8MW92 1017 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 LAD1O00515 517 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 NR1I2O75469 434 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 ADCY7P51828 1080 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 SHROOM1Q2M3G4 852 aaPredicted RBP12.66□□□□□ -0.38
LST1-203ENST00000339530 SYDE2Q5VT97 1194 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 ANGEL2Q5VTE6 544 aaKnown RBP12.66□□□□□ -0.38
LST1-203ENST00000339530 PIK3AP1Q6ZUJ8 805 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 KCTD1Q719H9 257 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 PNMA8AQ86V59 439 aaPredicted RBP12.66□□□□□ -0.38
LST1-203ENST00000339530 FAM160B2Q86V87 743 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 REXO1Q8N1G1 1221 aaKnown RBP12.66□□□□□ -0.38
LST1-203ENST00000339530 ENGASEQ8NFI3 743 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 TRPM4Q8TD43 1214 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 LPAR1Q92633 364 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 TIGD1Q96MW7 591 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 TAF1DQ9H5J8 278 aaPredicted RBP12.66□□□□□ -0.38
LST1-203ENST00000339530 PCDHA6Q9UN73 950 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 HPSEQ9Y251 543 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 PCDHB6Q9Y5E3 794 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 PCDHA8Q9Y5H6 950 aa12.66□□□□□ -0.38
LST1-203ENST00000339530 SRPRBQ9Y5M8 271 aaKnown RBP12.66□□□□□ -0.38
LST1-203ENST00000339530 OTOFQ9HC10 1997 aa12.65□□□□□ -0.38
LST1-203ENST00000339530 MYH7BA7E2Y1 1941 aa12.65□□□□□ -0.38
LST1-203ENST00000339530 STAT2P52630 851 aa12.65□□□□□ -0.38
LST1-203ENST00000339530 JAG1P78504 1218 aa12.65□□□□□ -0.38
LST1-203ENST00000339530 ATP2C1P98194 919 aaPredicted RBP12.65□□□□□ -0.38
LST1-203ENST00000339530 SNW1Q13573 536 aaKnown RBP12.65□□□□□ -0.38
LST1-203ENST00000339530 NONOQ15233 471 aaKnown RBP eCLIP12.65□□□□□ -0.38
LST1-203ENST00000339530 CDC37Q16543 378 aaPredicted RBP12.65□□□□□ -0.38
LST1-203ENST00000339530 RESP18Q5W5W9 173 aa12.65□□□□□ -0.38
LST1-203ENST00000339530 ARL6IP4Q66PJ3 421 aaKnown RBP12.65□□□□□ -0.38
LST1-203ENST00000339530 CDAN1Q8IWY9 1227 aa12.65□□□□□ -0.38
LST1-203ENST00000339530 ELOA2Q8IYF1 753 aaPredicted RBP12.65□□□□□ -0.38
LST1-203ENST00000339530 FMR1NBQ8N0W7 255 aaPredicted RBP12.65□□□□□ -0.38
LST1-203ENST00000339530 CHURC1Q8WUH1 139 aa12.65□□□□□ -0.38
LST1-203ENST00000339530 CUL5Q93034 780 aa12.65□□□□□ -0.38
LST1-203ENST00000339530 PYM1Q9BRP8 204 aaKnown RBP12.65□□□□□ -0.38
LST1-203ENST00000339530 CPVLQ9H3G5 476 aa12.65□□□□□ -0.38
LST1-203ENST00000339530 GOLPH3LQ9H4A5 285 aa12.65□□□□□ -0.38
LST1-203ENST00000339530 VAT1LQ9HCJ6 419 aa12.65□□□□□ -0.38
LST1-203ENST00000339530 RIC8AQ9NPQ8 531 aa12.65□□□□□ -0.38
LST1-203ENST00000339530 FAM13BQ9NYF5 915 aa12.65□□□□□ -0.38
LST1-203ENST00000339530 GGA3Q9NZ52 723 aa12.65□□□□□ -0.38
LST1-203ENST00000339530 ZNF112Q9UJU3 913 aa12.65□□□□□ -0.38
LST1-203ENST00000339530 FBXO2Q9UK22 296 aaPredicted RBP12.65□□□□□ -0.38
LST1-203ENST00000339530 A0A1W2PRG0 241 aa12.64□□□□□ -0.39
LST1-203ENST00000339530 USP17L10C9JJH3 530 aa12.64□□□□□ -0.39
LST1-203ENST00000339530 CAVIN2O95810 425 aa12.64□□□□□ -0.39
LST1-203ENST00000339530 CCDC192P0DO97 292 aa12.64□□□□□ -0.39
LST1-203ENST00000339530 PFKFB1P16118 471 aa12.64□□□□□ -0.39
LST1-203ENST00000339530 MARCKSP29966 332 aaPredicted RBP12.64□□□□□ -0.39
LST1-203ENST00000339530 CTCFP49711 727 aaPredicted RBP12.64□□□□□ -0.39
LST1-203ENST00000339530 MRPL12P52815 198 aaKnown RBP12.64□□□□□ -0.39
LST1-203ENST00000339530 QRICH1Q2TAL8 776 aa12.64□□□□□ -0.39
LST1-203ENST00000339530 SUPT20HL1Q3ZLR7 823 aa12.64□□□□□ -0.39
LST1-203ENST00000339530 EARS2Q5JPH6 523 aaKnown RBP12.64□□□□□ -0.39
LST1-203ENST00000339530 TTBK2Q6IQ55 1244 aa12.64□□□□□ -0.39
LST1-203ENST00000339530 MIGA2Q7L4E1 593 aa12.64□□□□□ -0.39
LST1-203ENST00000339530 GAS2L3Q86XJ1 694 aa12.64□□□□□ -0.39
LST1-203ENST00000339530 CCDC34Q96HJ3 373 aa12.64□□□□□ -0.39
LST1-203ENST00000339530 NAP1L4Q99733 375 aaKnown RBP12.64□□□□□ -0.39
LST1-203ENST00000339530 FUCA2Q9BTY2 467 aa12.64□□□□□ -0.39
LST1-203ENST00000339530 AMNQ9BXJ7 453 aa12.64□□□□□ -0.39
LST1-203ENST00000339530 KIAA1683Q9H0B3 1180 aa12.64□□□□□ -0.39
LST1-203ENST00000339530 AS3MTQ9HBK9 375 aa12.64□□□□□ -0.39
LST1-203ENST00000339530 FEM1BQ9UK73 627 aa12.64□□□□□ -0.39
LST1-203ENST00000339530 PNMA2Q9UL42 364 aa12.64□□□□□ -0.39
LST1-203ENST00000339530 PTPRFP10586 1907 aa12.63□□□□□ -0.39
LST1-203ENST00000339530 FAM205CA6NFA0 338 aa12.63□□□□□ -0.39
LST1-203ENST00000339530 TMEM232C9JQI7 657 aa12.63□□□□□ -0.39
LST1-203ENST00000339530 WDR46O15213 610 aaKnown RBP12.63□□□□□ -0.39
LST1-203ENST00000339530 RAD21O60216 631 aa12.63□□□□□ -0.39
LST1-203ENST00000339530 ITGBL1O95965 494 aaPredicted RBP12.63□□□□□ -0.39
LST1-203ENST00000339530 POTEIP0CG38 1075 aa12.63□□□□□ -0.39
LST1-203ENST00000339530 POTEJP0CG39 1038 aa12.63□□□□□ -0.39
LST1-203ENST00000339530 PRPHP41219 470 aa12.63□□□□□ -0.39
LST1-203ENST00000339530 ECE1P42892 770 aa12.63□□□□□ -0.39
LST1-203ENST00000339530 SYKP43405 635 aa12.63□□□□□ -0.39
LST1-203ENST00000339530 USP14P54578 494 aa12.63□□□□□ -0.39
LST1-203ENST00000339530 IKQ13123 557 aaPredicted RBP12.63□□□□□ -0.39
LST1-203ENST00000339530 AP3B2Q13367 1082 aa12.63□□□□□ -0.39
LST1-203ENST00000339530 NOL9Q5SY16 702 aaKnown RBP12.63□□□□□ -0.39
LST1-203ENST00000339530 SHC4Q6S5L8 630 aa12.63□□□□□ -0.39
LST1-203ENST00000339530 SCYL3Q8IZE3 742 aa12.63□□□□□ -0.39
LST1-203ENST00000339530 ACER1Q8TDN7 264 aa12.63□□□□□ -0.39
LST1-203ENST00000339530 FEZ1Q99689 392 aa12.63□□□□□ -0.39
LST1-203ENST00000339530 WDR18Q9BV38 432 aa12.63□□□□□ -0.39
LST1-203ENST00000339530 CLEC11AQ9Y240 323 aa12.63□□□□□ -0.39
LST1-203ENST00000339530 SSC5DA1L4H1 1573 aa12.63□□□□□ -0.39
LST1-203ENST00000339530 ASTN2O75129 1339 aaPredicted RBP12.62□□□□□ -0.39
LST1-203ENST00000339530 A0A1B0GVL5 298 aa12.62□□□□□ -0.39
LST1-203ENST00000339530 FOXN1O15353 648 aa12.62□□□□□ -0.39
LST1-203ENST00000339530 PPP1R11O60927 126 aaPredicted RBP12.62□□□□□ -0.39
LST1-203ENST00000339530 EPHX2P34913 555 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms