RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 SPZ1Q9BXG8 430 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 DHX36Q9H2U1 1008 aaKnown RBP12.62□□□□□ -0.39
LRP1-202ENST00000338962 BARHL2Q9NY43 387 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 COL2A1P02458 1487 aaPredicted RBP12.62□□□□□ -0.39
LRP1-202ENST00000338962 ITGBL1O95965 494 aaPredicted RBP12.62□□□□□ -0.39
LRP1-202ENST00000338962 RBM10P98175 930 aaKnown RBP12.62□□□□□ -0.39
LRP1-202ENST00000338962 ATP2C1P98194 919 aaPredicted RBP12.62□□□□□ -0.39
LRP1-202ENST00000338962 TCP10Q12799 353 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 PTGDRQ13258 359 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 POSTNQ15063 836 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 WWC2Q6AWC2 1192 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 ISM2Q6H9L7 571 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 GALNT17Q6IS24 598 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 KANK3Q6NY19 840 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 SH3BP5LQ7L8J4 393 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 PDILTQ8N807 584 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 MTMR4Q9NYA4 1195 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 CLIP2Q9UDT6 1046 aa12.62□□□□□ -0.39
LRP1-202ENST00000338962 CCDC194A0A1B0GVG4 234 aa12.61□□□□□ -0.39
LRP1-202ENST00000338962 WNT7AO00755 349 aa12.61□□□□□ -0.39
LRP1-202ENST00000338962 CDC25BP30305 580 aa12.61□□□□□ -0.39
LRP1-202ENST00000338962 NOVP48745 357 aa12.61□□□□□ -0.39
LRP1-202ENST00000338962 MAP3K10Q02779 954 aa12.61□□□□□ -0.39
LRP1-202ENST00000338962 SLC35G1Q2M3R5 365 aa12.61□□□□□ -0.39
LRP1-202ENST00000338962 USP17L2Q6R6M4 530 aa12.61□□□□□ -0.39
LRP1-202ENST00000338962 RASGRP2Q7LDG7 609 aa12.61□□□□□ -0.39
LRP1-202ENST00000338962 FAM177A1Q8N128 213 aaPredicted RBP12.61□□□□□ -0.39
LRP1-202ENST00000338962 RBM46Q8TBY0 533 aaKnown RBP12.61□□□□□ -0.39
LRP1-202ENST00000338962 CCDC12Q8WUD4 166 aaPredicted RBP12.61□□□□□ -0.39
LRP1-202ENST00000338962 MRFAP1L1Q96HT8 127 aa12.61□□□□□ -0.39
LRP1-202ENST00000338962 TMEM39BQ9GZU3 492 aa12.61□□□□□ -0.39
LRP1-202ENST00000338962 SEC63Q9UGP8 760 aaKnown RBP12.61□□□□□ -0.39
LRP1-202ENST00000338962 SCAF8Q9UPN6 1271 aaKnown RBP12.61□□□□□ -0.39
LRP1-202ENST00000338962 PCDHA5Q9Y5H7 936 aa12.61□□□□□ -0.39
LRP1-202ENST00000338962 VWA3AA6NCI4 1184 aa12.6□□□□□ -0.39
LRP1-202ENST00000338962 DDTLA6NHG4 134 aaPredicted RBP12.6□□□□□ -0.39
LRP1-202ENST00000338962 SMTNL1A8MU46 457 aa12.6□□□□□ -0.39
LRP1-202ENST00000338962 AKR1B1P15121 316 aa12.6□□□□□ -0.39
LRP1-202ENST00000338962 MCM7P33993 719 aa12.6□□□□□ -0.39
LRP1-202ENST00000338962 TYW1BQ6NUM6 668 aa12.6□□□□□ -0.39
LRP1-202ENST00000338962 USP49Q70CQ1 688 aa12.6□□□□□ -0.39
LRP1-202ENST00000338962 HOMER1Q86YM7 354 aa12.6□□□□□ -0.39
LRP1-202ENST00000338962 RRP36Q96EU6 259 aaKnown RBP12.6□□□□□ -0.39
LRP1-202ENST00000338962 GLIS2Q9BZE0 524 aaPredicted RBP12.6□□□□□ -0.39
LRP1-202ENST00000338962 SERTAD1Q9UHV2 236 aa12.6□□□□□ -0.39
LRP1-202ENST00000338962 ADM5C9JUS6 153 aa12.6□□□□□ -0.39
LRP1-202ENST00000338962 STXBP3O00186 592 aa12.6□□□□□ -0.39
LRP1-202ENST00000338962 SMARCA1P28370 1054 aa12.6□□□□□ -0.39
LRP1-202ENST00000338962 DAGLBQ8NCG7 672 aa12.6□□□□□ -0.39
LRP1-202ENST00000338962 SMC1BQ8NDV3 1235 aa12.6□□□□□ -0.39
LRP1-202ENST00000338962 SYMPKQ92797 1274 aaKnown RBP12.6□□□□□ -0.39
LRP1-202ENST00000338962 EPSTI1Q96J88 318 aa12.6□□□□□ -0.39
LRP1-202ENST00000338962 MAP7D2Q96T17 732 aa12.6□□□□□ -0.39
LRP1-202ENST00000338962 PDCL3Q9H2J4 239 aa12.6□□□□□ -0.39
LRP1-202ENST00000338962 CPVLQ9H3G5 476 aa12.6□□□□□ -0.39
LRP1-202ENST00000338962 PI4KBQ9UBF8 816 aa12.6□□□□□ -0.39
LRP1-202ENST00000338962 IKBKBO14920 756 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 FOXN1O15353 648 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 ACTN4O43707 911 aaKnown RBP12.59□□□□□ -0.39
LRP1-202ENST00000338962 TTLL1O95922 423 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 PDHBP11177 359 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 PTGS1P23219 599 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 NAPAP54920 295 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 MDM2Q00987 491 aaPredicted RBP12.59□□□□□ -0.39
LRP1-202ENST00000338962 CCDC186Q7Z3E2 898 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 FOXP4Q8IVH2 680 aaPredicted RBP12.59□□□□□ -0.39
LRP1-202ENST00000338962 LRRC47Q8N1G4 583 aaKnown RBP12.59□□□□□ -0.39
LRP1-202ENST00000338962 RASGRP4Q8TDF6 673 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 SMARCE1Q969G3 411 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 USP17L5A8MUK1 530 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 ADAMTS3O15072 1205 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 TBC1D12O60347 775 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 SHMT1P34896 483 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 SUPT20HL1Q3ZLR7 823 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 ASPRV1Q53RT3 343 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 CDAN1Q8IWY9 1227 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 DHX58Q96C10 678 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 EHD4Q9H223 541 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 KCNF1Q9H3M0 494 aa12.59□□□□□ -0.39
LRP1-202ENST00000338962 MYH8P13535 1937 aa12.58□□□□□ -0.39
LRP1-202ENST00000338962 MPHOSPH10O00566 681 aaKnown RBP12.58□□□□□ -0.4
LRP1-202ENST00000338962 GNA11P29992 359 aa12.58□□□□□ -0.4
LRP1-202ENST00000338962 MYL5Q02045 173 aa12.58□□□□□ -0.4
LRP1-202ENST00000338962 FSTL1Q12841 308 aa12.58□□□□□ -0.4
LRP1-202ENST00000338962 NBPF12Q5TAG4 269 aaPredicted RBP12.58□□□□□ -0.4
LRP1-202ENST00000338962 PRAMEF18Q5VWM3 479 aa12.58□□□□□ -0.4
LRP1-202ENST00000338962 ARL6IP4Q66PJ3 421 aaKnown RBP12.58□□□□□ -0.4
LRP1-202ENST00000338962 DLK2Q6UY11 383 aa12.58□□□□□ -0.4
LRP1-202ENST00000338962 HOOK2Q96ED9 719 aa12.58□□□□□ -0.4
LRP1-202ENST00000338962 CSRNP1Q96S65 589 aa12.58□□□□□ -0.4
LRP1-202ENST00000338962 ZMYND12Q9H0C1 365 aa12.58□□□□□ -0.4
LRP1-202ENST00000338962 VAT1LQ9HCJ6 419 aa12.58□□□□□ -0.4
LRP1-202ENST00000338962 PCDHA6Q9UN73 950 aa12.58□□□□□ -0.4
LRP1-202ENST00000338962 PCDHA8Q9Y5H6 950 aa12.58□□□□□ -0.4
LRP1-202ENST00000338962 IGKV6D-41A0A0C4DH26 115 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 M0R2N6 131 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 SLFN14P0C7P3 912 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 C1QTNF8P60827 252 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 NT5DC1Q5TFE4 455 aa12.57□□□□□ -0.4
LRP1-202ENST00000338962 CLEC10AQ8IUN9 316 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms