RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 KRT26Q7Z3Y9 468 aa22.73■■□□□ 1.23
RUNX3-202ENST00000338888 FNBP4Q8N3X1 1017 aaPredicted RBP22.73■■□□□ 1.23
RUNX3-202ENST00000338888 CAPN6Q9Y6Q1 641 aa22.73■■□□□ 1.23
RUNX3-202ENST00000338888 V9GY48 417 aaPredicted RBP22.73■■□□□ 1.23
RUNX3-202ENST00000338888 PKD1L3Q7Z443 1732 aa22.73■■□□□ 1.23
RUNX3-202ENST00000338888 AKAP11Q9UKA4 1901 aa22.72■■□□□ 1.23
RUNX3-202ENST00000338888 FSBPO95073 299 aa22.72■■□□□ 1.23
RUNX3-202ENST00000338888 RMND1Q9NWS8 449 aa22.72■■□□□ 1.23
RUNX3-202ENST00000338888 DONSONQ9NYP3 566 aa22.72■■□□□ 1.23
RUNX3-202ENST00000338888 SUFUQ9UMX1 484 aa22.72■■□□□ 1.23
RUNX3-202ENST00000338888 RIC1Q4ADV7 1423 aa22.72■■□□□ 1.23
RUNX3-202ENST00000338888 LRP6O75581 1613 aa22.72■■□□□ 1.23
RUNX3-202ENST00000338888 ATP2C1P98194 919 aaPredicted RBP22.72■■□□□ 1.23
RUNX3-202ENST00000338888 CCDC96Q2M329 555 aa22.72■■□□□ 1.23
RUNX3-202ENST00000338888 CNNM1Q9NRU3 951 aa22.72■■□□□ 1.23
RUNX3-202ENST00000338888 PDS5AQ29RF7 1337 aaKnown RBP22.71■■□□□ 1.23
RUNX3-202ENST00000338888 PCDH11XQ9BZA7 1347 aa22.71■■□□□ 1.23
RUNX3-202ENST00000338888 PCDH11YQ9BZA8 1340 aa22.71■■□□□ 1.23
RUNX3-202ENST00000338888 RASSF10A6NK89 507 aa22.71■■□□□ 1.23
RUNX3-202ENST00000338888 GUCY1A3Q02108 690 aa22.71■■□□□ 1.23
RUNX3-202ENST00000338888 TMTC2Q8N394 836 aa22.71■■□□□ 1.23
RUNX3-202ENST00000338888 TTLL11Q8NHH1 800 aa22.71■■□□□ 1.23
RUNX3-202ENST00000338888 RNPC3Q96LT9 517 aaKnown RBP22.71■■□□□ 1.23
RUNX3-202ENST00000338888 PCMTD1Q96MG8 357 aaPredicted RBP22.71■■□□□ 1.23
RUNX3-202ENST00000338888 ISCA1Q9BUE6 129 aa22.71■■□□□ 1.23
RUNX3-202ENST00000338888 MLXIPQ9HAP2 919 aa22.71■■□□□ 1.23
RUNX3-202ENST00000338888 ZNF263O14978 683 aa22.71■■□□□ 1.23
RUNX3-202ENST00000338888 GPTP24298 496 aa22.71■■□□□ 1.23
RUNX3-202ENST00000338888 IL17AQ16552 155 aa22.71■■□□□ 1.23
RUNX3-202ENST00000338888 RNF187Q5TA31 235 aaPredicted RBP22.71■■□□□ 1.23
RUNX3-202ENST00000338888 NFRKBQ6P4R8 1299 aa22.71■■□□□ 1.23
RUNX3-202ENST00000338888 EMBQ6PCB8 327 aa22.71■■□□□ 1.23
RUNX3-202ENST00000338888 CCDC170Q8IYT3 715 aa22.71■■□□□ 1.23
RUNX3-202ENST00000338888 ADSSL1Q8N142 457 aa22.71■■□□□ 1.23
RUNX3-202ENST00000338888 UBAC1Q9BSL1 405 aa22.71■■□□□ 1.23
RUNX3-202ENST00000338888 STIM2Q9P246 746 aa22.71■■□□□ 1.23
RUNX3-202ENST00000338888 DNM2P50570 870 aa22.7■■□□□ 1.22
RUNX3-202ENST00000338888 VAV2P52735 878 aa22.7■■□□□ 1.22
RUNX3-202ENST00000338888 STAG1Q8WVM7 1258 aa22.7■■□□□ 1.22
RUNX3-202ENST00000338888 TRIM47Q96LD4 638 aa22.7■■□□□ 1.22
RUNX3-202ENST00000338888 MAGEC2Q9UBF1 373 aaPredicted RBP22.7■■□□□ 1.22
RUNX3-202ENST00000338888 A6NNZ2 444 aa22.7■■□□□ 1.22
RUNX3-202ENST00000338888 EEF1GP26641 437 aaKnown RBP22.7■■□□□ 1.22
RUNX3-202ENST00000338888 LSP1P33241 339 aa22.7■■□□□ 1.22
RUNX3-202ENST00000338888 DDR1Q08345 913 aa22.7■■□□□ 1.22
RUNX3-202ENST00000338888 TUBB8Q3ZCM7 444 aa22.7■■□□□ 1.22
RUNX3-202ENST00000338888 HAUS3Q68CZ6 603 aa22.7■■□□□ 1.22
RUNX3-202ENST00000338888 TTYH3Q9C0H2 523 aa22.7■■□□□ 1.22
RUNX3-202ENST00000338888 MOCS3O95396 460 aa22.69■■□□□ 1.22
RUNX3-202ENST00000338888 CSF1RP07333 972 aa22.69■■□□□ 1.22
RUNX3-202ENST00000338888 PLEKP08567 350 aaPredicted RBP22.69■■□□□ 1.22
RUNX3-202ENST00000338888 NAP1L1P55209 391 aaKnown RBP22.69■■□□□ 1.22
RUNX3-202ENST00000338888 NAA35Q5VZE5 725 aa22.69■■□□□ 1.22
RUNX3-202ENST00000338888 TRIM58Q8NG06 486 aa22.69■■□□□ 1.22
RUNX3-202ENST00000338888 ZNF512BQ96KM6 892 aaPredicted RBP22.69■■□□□ 1.22
RUNX3-202ENST00000338888 ATXN2Q99700 1313 aaKnown RBP22.69■■□□□ 1.22
RUNX3-202ENST00000338888 TACC1O75410 805 aa22.69■■□□□ 1.22
RUNX3-202ENST00000338888 SRGNP10124 158 aa22.69■■□□□ 1.22
RUNX3-202ENST00000338888 ITGA6P23229 1130 aa22.69■■□□□ 1.22
RUNX3-202ENST00000338888 MCM7P33993 719 aa22.69■■□□□ 1.22
RUNX3-202ENST00000338888 APBA1Q02410 837 aa22.69■■□□□ 1.22
RUNX3-202ENST00000338888 SPA17Q15506 151 aa22.69■■□□□ 1.22
RUNX3-202ENST00000338888 CCDC181Q5TID7 509 aa22.69■■□□□ 1.22
RUNX3-202ENST00000338888 EP400NLQ6ZTU2 488 aa22.69■■□□□ 1.22
RUNX3-202ENST00000338888 CCDC42Q96M95 316 aa22.69■■□□□ 1.22
RUNX3-202ENST00000338888 OSBPL9Q96SU4 736 aa22.69■■□□□ 1.22
RUNX3-202ENST00000338888 EXOC1Q9NV70 894 aa22.69■■□□□ 1.22
RUNX3-202ENST00000338888 NHSL1Q5SYE7 1610 aa22.69■■□□□ 1.22
RUNX3-202ENST00000338888 NUTM2BA6NNL0 878 aaPredicted RBP22.68■■□□□ 1.22
RUNX3-202ENST00000338888 NUTM2EB1AL46 878 aaPredicted RBP22.68■■□□□ 1.22
RUNX3-202ENST00000338888 ZBED6P86452 979 aa22.68■■□□□ 1.22
RUNX3-202ENST00000338888 TBC1D8BQ0IIM8 1120 aa22.68■■□□□ 1.22
RUNX3-202ENST00000338888 TUBGCP2Q9BSJ2 902 aa22.68■■□□□ 1.22
RUNX3-202ENST00000338888 GREM2Q9H772 168 aa22.68■■□□□ 1.22
RUNX3-202ENST00000338888 SLC4A4Q9Y6R1 1079 aa22.68■■□□□ 1.22
RUNX3-202ENST00000338888 PARP4Q9UKK3 1724 aaKnown RBP22.68■■□□□ 1.22
RUNX3-202ENST00000338888 ABCA3Q99758 1704 aa22.68■■□□□ 1.22
RUNX3-202ENST00000338888 PLEKHA8P1O95397 391 aa22.68■■□□□ 1.22
RUNX3-202ENST00000338888 SEC24CP53992 1094 aa22.68■■□□□ 1.22
RUNX3-202ENST00000338888 SPATS2Q86XZ4 545 aaKnown RBP22.68■■□□□ 1.22
RUNX3-202ENST00000338888 CAVIN3Q969G5 261 aa22.68■■□□□ 1.22
RUNX3-202ENST00000338888 ZKSCAN4Q969J2 545 aaPredicted RBP22.68■■□□□ 1.22
RUNX3-202ENST00000338888 CCDC43Q96MW1 224 aaKnown RBP22.68■■□□□ 1.22
RUNX3-202ENST00000338888 EPN3Q9H201 632 aa22.68■■□□□ 1.22
RUNX3-202ENST00000338888 MICALCLQ6ZW33 695 aa22.67■■□□□ 1.22
RUNX3-202ENST00000338888 BANK1Q8NDB2 785 aa22.67■■□□□ 1.22
RUNX3-202ENST00000338888 ZNF473Q8WTR7 871 aaKnown RBP22.67■■□□□ 1.22
RUNX3-202ENST00000338888 A1CFQ9NQ94 594 aaKnown RBP22.67■■□□□ 1.22
RUNX3-202ENST00000338888 ITIH3Q06033 890 aa22.67■■□□□ 1.22
RUNX3-202ENST00000338888 C8orf74Q6P047 294 aa22.67■■□□□ 1.22
RUNX3-202ENST00000338888 PIK3AP1Q6ZUJ8 805 aa22.67■■□□□ 1.22
RUNX3-202ENST00000338888 LCORLQ8N3X6 602 aa22.67■■□□□ 1.22
RUNX3-202ENST00000338888 GIMAP7Q8NHV1 300 aa22.67■■□□□ 1.22
RUNX3-202ENST00000338888 RUBCNQ92622 972 aa22.67■■□□□ 1.22
RUNX3-202ENST00000338888 TNFRSF25Q93038 417 aa22.67■■□□□ 1.22
RUNX3-202ENST00000338888 TSGA10Q9BZW7 698 aa22.67■■□□□ 1.22
RUNX3-202ENST00000338888 THAP9Q9H5L6 903 aa22.67■■□□□ 1.22
RUNX3-202ENST00000338888 TNKSO95271 1327 aa22.67■■□□□ 1.22
RUNX3-202ENST00000338888 NCK2O43639 380 aa22.66■■□□□ 1.22
RUNX3-202ENST00000338888 USO1O60763 962 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms