RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TMEM47Q9BQJ4 181 aa15.82■□□□□ 0.12
NUDCD3-201ENST00000338427 GPCPD1Q9NPB8 672 aa15.82■□□□□ 0.12
NUDCD3-201ENST00000338427 ZHX1Q9UKY1 873 aaPredicted RBP15.82■□□□□ 0.12
NUDCD3-201ENST00000338427 PRR12Q9ULL5 1215 aa15.82■□□□□ 0.12
NUDCD3-201ENST00000338427 MYADML2A6NDP7 307 aa15.81■□□□□ 0.12
NUDCD3-201ENST00000338427 SOWAHBA6NEL2 793 aa15.81■□□□□ 0.12
NUDCD3-201ENST00000338427 ALAS1P13196 640 aa15.81■□□□□ 0.12
NUDCD3-201ENST00000338427 NOVP48745 357 aa15.81■□□□□ 0.12
NUDCD3-201ENST00000338427 STAT2P52630 851 aa15.81■□□□□ 0.12
NUDCD3-201ENST00000338427 FRMPD2Q68DX3 1309 aaPredicted RBP15.81■□□□□ 0.12
NUDCD3-201ENST00000338427 CWC27Q6UX04 472 aaKnown RBP15.81■□□□□ 0.12
NUDCD3-201ENST00000338427 MAMDC4Q6UXC1 1216 aa15.81■□□□□ 0.12
NUDCD3-201ENST00000338427 Q7L0L9 218 aa15.81■□□□□ 0.12
NUDCD3-201ENST00000338427 TBC1D10CQ8IV04 446 aa15.81■□□□□ 0.12
NUDCD3-201ENST00000338427 TRERF1Q96PN7 1200 aa15.81■□□□□ 0.12
NUDCD3-201ENST00000338427 ZKSCAN3Q9BRR0 538 aa15.81■□□□□ 0.12
NUDCD3-201ENST00000338427 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.81■□□□□ 0.12
NUDCD3-201ENST00000338427 SYNPO2Q9UMS6 1093 aa15.81■□□□□ 0.12
NUDCD3-201ENST00000338427 CNPY2Q9Y2B0 182 aa15.81■□□□□ 0.12
NUDCD3-201ENST00000338427 CCDC171Q6TFL3 1326 aa15.8■□□□□ 0.12
NUDCD3-201ENST00000338427 A0A1W2PPC1 479 aa15.8■□□□□ 0.12
NUDCD3-201ENST00000338427 TRIM43BA6NCK2 446 aa15.8■□□□□ 0.12
NUDCD3-201ENST00000338427 PDE4AP27815 886 aa15.8■□□□□ 0.12
NUDCD3-201ENST00000338427 TLE2Q04725 743 aa15.8■□□□□ 0.12
NUDCD3-201ENST00000338427 ACVR2BQ13705 512 aa15.8■□□□□ 0.12
NUDCD3-201ENST00000338427 CCDC96Q2M329 555 aa15.8■□□□□ 0.12
NUDCD3-201ENST00000338427 TMEM63BQ5T3F8 832 aa15.8■□□□□ 0.12
NUDCD3-201ENST00000338427 FAM160B2Q86V87 743 aa15.8■□□□□ 0.12
NUDCD3-201ENST00000338427 TDHQ8IZJ6 230 aa15.8■□□□□ 0.12
NUDCD3-201ENST00000338427 CHST13Q8NET6 341 aa15.8■□□□□ 0.12
NUDCD3-201ENST00000338427 TRIM43Q96BQ3 446 aaPredicted RBP15.8■□□□□ 0.12
NUDCD3-201ENST00000338427 OSBPL3Q9H4L5 887 aa15.8■□□□□ 0.12
NUDCD3-201ENST00000338427 PRDM5Q9NQX1 630 aaPredicted RBP15.8■□□□□ 0.12
NUDCD3-201ENST00000338427 RNF146Q9NTX7 359 aa15.8■□□□□ 0.12
NUDCD3-201ENST00000338427 NRBP1Q9UHY1 535 aa15.8■□□□□ 0.12
NUDCD3-201ENST00000338427 FAM184BQ9ULE4 1060 aa15.8■□□□□ 0.12
NUDCD3-201ENST00000338427 POTEB2H3BUK9 544 aa15.79■□□□□ 0.12
NUDCD3-201ENST00000338427 ADAMTS4O75173 837 aa15.79■□□□□ 0.12
NUDCD3-201ENST00000338427 AKR1A1P14550 325 aa15.79■□□□□ 0.12
NUDCD3-201ENST00000338427 ITGB8P26012 769 aa15.79■□□□□ 0.12
NUDCD3-201ENST00000338427 OAZ1P54368 228 aa15.79■□□□□ 0.12
NUDCD3-201ENST00000338427 AAMPQ13685 434 aa15.79■□□□□ 0.12
NUDCD3-201ENST00000338427 CCDC144CPQ8IYA2 1237 aa15.79■□□□□ 0.12
NUDCD3-201ENST00000338427 FAM133AQ8N9E0 248 aa15.79■□□□□ 0.12
NUDCD3-201ENST00000338427 IL25Q9H293 177 aa15.79■□□□□ 0.12
NUDCD3-201ENST00000338427 A1CFQ9NQ94 594 aaKnown RBP15.79■□□□□ 0.12
NUDCD3-201ENST00000338427 PHF24Q9UPV7 400 aa15.79■□□□□ 0.12
NUDCD3-201ENST00000338427 LAMA3Q16787 3333 aa15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 ASTN1O14525 1302 aa15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 SYNGAP1Q96PV0 1343 aa15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 PLA2G6O60733 806 aa15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 KCNA10Q16322 511 aa15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 CCDC144BQ3MJ40 725 aa15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 AKNAD1Q5T1N1 836 aa15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 MFSD6Q6ZSS7 791 aa15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 ARMCX2Q7L311 632 aa15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 RNF180Q86T96 592 aa15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 KLHDC9Q8NEP7 349 aa15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 BADQ92934 168 aa15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 LBHD1Q9BQE6 289 aaPredicted RBP15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 KATNBL1Q9H079 304 aa15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 CPVLQ9H3G5 476 aa15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 ACAD9Q9H845 621 aa15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 TCP11L1Q9NUJ3 509 aa15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 FBXO40Q9UH90 709 aa15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 MCM3APO60318 1980 aa15.78■□□□□ 0.12
NUDCD3-201ENST00000338427 SYNRGQ9UMZ2 1314 aa15.77■□□□□ 0.12
NUDCD3-201ENST00000338427 A0A1W2PQ45 241 aaPredicted RBP15.77■□□□□ 0.12
NUDCD3-201ENST00000338427 A0A1W2PQY0 241 aa15.77■□□□□ 0.12
NUDCD3-201ENST00000338427 FDX1P10109 184 aa15.77■□□□□ 0.12
NUDCD3-201ENST00000338427 TOP1P11387 765 aaKnown RBP15.77■□□□□ 0.12
NUDCD3-201ENST00000338427 SNX17Q15036 470 aa15.77■□□□□ 0.12
NUDCD3-201ENST00000338427 CCSAPQ6IQ19 270 aaPredicted RBP15.77■□□□□ 0.12
NUDCD3-201ENST00000338427 EEPD1Q7L9B9 569 aa15.77■□□□□ 0.12
NUDCD3-201ENST00000338427 ZNF467Q7Z7K2 595 aaPredicted RBP15.77■□□□□ 0.12
NUDCD3-201ENST00000338427 DCAF4Q8WV16 495 aa15.77■□□□□ 0.12
NUDCD3-201ENST00000338427 PDLIM7Q9NR12 457 aa15.77■□□□□ 0.12
NUDCD3-201ENST00000338427 PDGFCQ9NRA1 345 aa15.77■□□□□ 0.12
NUDCD3-201ENST00000338427 NEDD4P46934 1319 aa15.76■□□□□ 0.11
NUDCD3-201ENST00000338427 ZNF213O14771 459 aa15.76■□□□□ 0.11
NUDCD3-201ENST00000338427 GOLGA8HP0CJ92 632 aa15.76■□□□□ 0.11
NUDCD3-201ENST00000338427 ACLYP53396 1101 aa15.76■□□□□ 0.11
NUDCD3-201ENST00000338427 BEX3Q00994 111 aa15.76■□□□□ 0.11
NUDCD3-201ENST00000338427 SHHQ15465 462 aa15.76■□□□□ 0.11
NUDCD3-201ENST00000338427 LRIT3Q3SXY7 679 aa15.76■□□□□ 0.11
NUDCD3-201ENST00000338427 C9orf50Q5SZB4 431 aa15.76■□□□□ 0.11
NUDCD3-201ENST00000338427 SYDE2Q5VT97 1194 aa15.76■□□□□ 0.11
NUDCD3-201ENST00000338427 BTNL9Q6UXG8 535 aa15.76■□□□□ 0.11
NUDCD3-201ENST00000338427 NSMFQ6X4W1 530 aa15.76■□□□□ 0.11
NUDCD3-201ENST00000338427 MSL3Q8N5Y2 521 aaKnown RBP15.76■□□□□ 0.11
NUDCD3-201ENST00000338427 UBA5Q9GZZ9 404 aa15.76■□□□□ 0.11
NUDCD3-201ENST00000338427 ABHD16BQ9H3Z7 469 aa15.76■□□□□ 0.11
NUDCD3-201ENST00000338427 PRKAG2Q9UGJ0 569 aa15.76■□□□□ 0.11
NUDCD3-201ENST00000338427 CCPG1Q9ULG6 757 aa15.76■□□□□ 0.11
NUDCD3-201ENST00000338427 CTAGE5O15320 804 aa15.75■□□□□ 0.11
NUDCD3-201ENST00000338427 PQBP1O60828 265 aaKnown RBP15.75■□□□□ 0.11
NUDCD3-201ENST00000338427 DUSP11O75319 330 aaKnown RBP15.75■□□□□ 0.11
NUDCD3-201ENST00000338427 C6orf222P0C671 652 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms