RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 GAS2L1Q99501 681 aaPredicted RBP13.74□□□□□ -0.21
CSMD2-202ENST00000338325 LRRCC1Q9C099 1032 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 CHMP4BQ9H444 224 aaKnown RBP13.74□□□□□ -0.21
CSMD2-202ENST00000338325 CLIP2Q9UDT6 1046 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 FEM1BQ9UK73 627 aa13.74□□□□□ -0.21
CSMD2-202ENST00000338325 MINDY4BA8MYZ0 360 aa13.73□□□□□ -0.21
CSMD2-202ENST00000338325 TLR3O15455 904 aaKnown RBP13.73□□□□□ -0.21
CSMD2-202ENST00000338325 CSF2RAP15509 400 aa13.73□□□□□ -0.21
CSMD2-202ENST00000338325 OAZ1P54368 228 aa13.73□□□□□ -0.21
CSMD2-202ENST00000338325 CCDC129Q6ZRS4 1044 aa13.73□□□□□ -0.21
CSMD2-202ENST00000338325 C16orf59Q7L2K0 433 aa13.73□□□□□ -0.21
CSMD2-202ENST00000338325 FAM126BQ8IXS8 530 aa13.73□□□□□ -0.21
CSMD2-202ENST00000338325 PBX4Q9BYU1 374 aa13.73□□□□□ -0.21
CSMD2-202ENST00000338325 PPP1R12CQ9BZL4 782 aa13.73□□□□□ -0.21
CSMD2-202ENST00000338325 SYNPO2Q9UMS6 1093 aa13.73□□□□□ -0.21
CSMD2-202ENST00000338325 GRXCR1A8MXD5 290 aa13.72□□□□□ -0.21
CSMD2-202ENST00000338325 PBX2P40425 430 aa13.72□□□□□ -0.21
CSMD2-202ENST00000338325 GNASQ5JWF2 1037 aa13.72□□□□□ -0.21
CSMD2-202ENST00000338325 CCDC144CPQ8IYA2 1237 aa13.72□□□□□ -0.21
CSMD2-202ENST00000338325 MKL1Q969V6 931 aa13.72□□□□□ -0.21
CSMD2-202ENST00000338325 CEP95Q96GE4 821 aa13.72□□□□□ -0.21
CSMD2-202ENST00000338325 KATNBL1Q9H079 304 aa13.72□□□□□ -0.21
CSMD2-202ENST00000338325 ZNF287Q9HBT7 754 aa13.72□□□□□ -0.21
CSMD2-202ENST00000338325 TTC28Q96AY4 2481 aa13.72□□□□□ -0.21
CSMD2-202ENST00000338325 TNFRSF10AO00220 468 aa13.71□□□□□ -0.21
CSMD2-202ENST00000338325 SMARCA5O60264 1052 aaPredicted RBP13.71□□□□□ -0.21
CSMD2-202ENST00000338325 ACRP10323 421 aa13.71□□□□□ -0.21
CSMD2-202ENST00000338325 NKX3-2P78367 333 aa13.71□□□□□ -0.21
CSMD2-202ENST00000338325 ZNF365Q70YC5 407 aa13.71□□□□□ -0.21
CSMD2-202ENST00000338325 ZNF444Q8N0Y2 327 aaPredicted RBP13.71□□□□□ -0.21
CSMD2-202ENST00000338325 LRRC47Q8N1G4 583 aaKnown RBP13.71□□□□□ -0.21
CSMD2-202ENST00000338325 KBTBD3Q8NAB2 608 aa13.71□□□□□ -0.21
CSMD2-202ENST00000338325 GMCL1P1Q8NEA9 526 aa13.71□□□□□ -0.21
CSMD2-202ENST00000338325 APPBP2Q92624 585 aa13.71□□□□□ -0.21
CSMD2-202ENST00000338325 OSBP2Q969R2 916 aa13.71□□□□□ -0.21
CSMD2-202ENST00000338325 EPB41L4AQ9HCS5 686 aaPredicted RBP13.71□□□□□ -0.21
CSMD2-202ENST00000338325 ECHDC1Q9NTX5 307 aa13.71□□□□□ -0.21
CSMD2-202ENST00000338325 MTMR4Q9NYA4 1195 aa13.71□□□□□ -0.21
CSMD2-202ENST00000338325 PLIN4Q96Q06 1357 aa13.71□□□□□ -0.22
CSMD2-202ENST00000338325 LCTP09848 1927 aa13.71□□□□□ -0.22
CSMD2-202ENST00000338325 CHD9Q3L8U1 2897 aa13.7□□□□□ -0.22
CSMD2-202ENST00000338325 CTAGE5O15320 804 aa13.7□□□□□ -0.22
CSMD2-202ENST00000338325 PRDM1O75626 825 aa13.7□□□□□ -0.22
CSMD2-202ENST00000338325 TTLL1O95922 423 aa13.7□□□□□ -0.22
CSMD2-202ENST00000338325 CD4P01730 458 aa13.7□□□□□ -0.22
CSMD2-202ENST00000338325 FDX1P10109 184 aa13.7□□□□□ -0.22
CSMD2-202ENST00000338325 TDO2P48775 406 aa13.7□□□□□ -0.22
CSMD2-202ENST00000338325 AKNAD1Q5T1N1 836 aa13.7□□□□□ -0.22
CSMD2-202ENST00000338325 PRDM12Q9H4Q4 367 aa13.7□□□□□ -0.22
CSMD2-202ENST00000338325 ACAD9Q9H845 621 aa13.7□□□□□ -0.22
CSMD2-202ENST00000338325 IL23AQ9NPF7 189 aa13.7□□□□□ -0.22
CSMD2-202ENST00000338325 HOMER2Q9NSB8 354 aa13.7□□□□□ -0.22
CSMD2-202ENST00000338325 MYO9BQ13459 2157 aa13.7□□□□□ -0.22
CSMD2-202ENST00000338325 RNF113AO15541 343 aaKnown RBP13.69□□□□□ -0.22
CSMD2-202ENST00000338325 GPAA1O43292 621 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 BMP3P12645 472 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 GNAT2P19087 354 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 CYP2C18P33260 490 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 BEX3Q00994 111 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 CNTN2Q02246 1040 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 TNFAIP2Q03169 654 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 RAB30Q15771 203 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 SLFN13Q68D06 897 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 FAM133AQ8N9E0 248 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 SLC43A3Q8NBI5 491 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 ATXN2LQ8WWM7 1075 aaKnown RBP13.69□□□□□ -0.22
CSMD2-202ENST00000338325 PPM1EQ8WY54 764 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 HERVK_113Q902F9 699 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 MTIF3Q9H2K0 278 aaKnown RBP13.69□□□□□ -0.22
CSMD2-202ENST00000338325 MSRAQ9UJ68 235 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.69□□□□□ -0.22
CSMD2-202ENST00000338325 CABYRO75952 493 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 ZFYP08048 801 aaPredicted RBP13.69□□□□□ -0.22
CSMD2-202ENST00000338325 STAT2P52630 851 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 NOL8Q76FK4 1167 aaKnown RBP13.69□□□□□ -0.22
CSMD2-202ENST00000338325 TLK2Q86UE8 772 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 GPATCH3Q96I76 525 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 A1CFQ9NQ94 594 aaKnown RBP13.69□□□□□ -0.22
CSMD2-202ENST00000338325 RNF146Q9NTX7 359 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 THEGQ9P2T0 379 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 ISY1Q9ULR0 285 aaKnown RBP13.69□□□□□ -0.22
CSMD2-202ENST00000338325 MUC3AQ02505 3323 aa13.69□□□□□ -0.22
CSMD2-202ENST00000338325 ASTN1O14525 1302 aa13.68□□□□□ -0.22
CSMD2-202ENST00000338325 ASB14A6NK59 587 aa13.68□□□□□ -0.22
CSMD2-202ENST00000338325 TMEM232C9JQI7 657 aa13.68□□□□□ -0.22
CSMD2-202ENST00000338325 M0R2C6 588 aa13.68□□□□□ -0.22
CSMD2-202ENST00000338325 APPP05067 770 aa13.68□□□□□ -0.22
CSMD2-202ENST00000338325 TSPY3P0CV98 308 aa13.68□□□□□ -0.22
CSMD2-202ENST00000338325 TSPY8P0CW00 308 aa13.68□□□□□ -0.22
CSMD2-202ENST00000338325 CXCL17Q6UXB2 119 aa13.68□□□□□ -0.22
CSMD2-202ENST00000338325 FAM160B2Q86V87 743 aa13.68□□□□□ -0.22
CSMD2-202ENST00000338325 NEDD1Q8NHV4 660 aa13.68□□□□□ -0.22
CSMD2-202ENST00000338325 HIPK3Q9H422 1215 aa13.68□□□□□ -0.22
CSMD2-202ENST00000338325 CXXC1Q9P0U4 656 aaPredicted RBP13.68□□□□□ -0.22
CSMD2-202ENST00000338325 GNEQ9Y223 722 aaKnown RBP13.68□□□□□ -0.22
CSMD2-202ENST00000338325 SOWAHBA6NEL2 793 aa13.67□□□□□ -0.22
CSMD2-202ENST00000338325 FGBP02675 491 aa13.67□□□□□ -0.22
CSMD2-202ENST00000338325 PDE4BQ07343 736 aa13.67□□□□□ -0.22
CSMD2-202ENST00000338325 IKQ13123 557 aaPredicted RBP13.67□□□□□ -0.22
CSMD2-202ENST00000338325 ITGA7Q13683 1181 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms