RNA–Protein interactions for RNA: ENST00000338017.8

SLITRK4-201, Transcript of SLIT and NTRK like family member 4, human

APPRIS P1 TSL 1 (best) BASIC

Gene SLITRK4, Length 3,357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLITRK4-201	ENST00000338017	MKRN1	Q9UHC7	482 aa	Known RBP	18.2	■□□□□ 0.5
SLITRK4-201	ENST00000338017	BMP15	O95972	392 aa		18.2	■□□□□ 0.5
SLITRK4-201	ENST00000338017	MAGEA9	P43362	315 aa		18.2	■□□□□ 0.5
SLITRK4-201	ENST00000338017	USP5	P45974	858 aa		18.2	■□□□□ 0.5
SLITRK4-201	ENST00000338017	PROCA1	Q8NCQ7	364 aa	Predicted RBP	18.2	■□□□□ 0.5
SLITRK4-201	ENST00000338017	MCM9	Q9NXL9	1143 aa		18.2	■□□□□ 0.5
SLITRK4-201	ENST00000338017	PPFIA4	O75335	1185 aa		18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	SYF2	O95926	243 aa	Known RBP	18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	ALX1	Q15699	326 aa		18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	VGLL2	Q8N8G2	317 aa		18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	PPM1E	Q8WY54	764 aa		18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	CNOT6L	Q96LI5	555 aa	Known RBP	18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	NDUFAB1	O14561	156 aa		18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	USO1	O60763	962 aa	Known RBP	18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	FCER1A	P12319	257 aa		18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	HPD	P32754	393 aa	Predicted RBP	18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	FBXW10	Q5XX13	1052 aa		18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	RRAGA	Q7L523	313 aa		18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017		H7C1D1	291 aa		18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	TACC1	O75410	805 aa		18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	PAFAH1B1	P43034	410 aa		18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	KCNQ4	P56696	695 aa		18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	TUBB2A	Q13885	445 aa		18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	TRIM14	Q14142	442 aa		18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	HLTF	Q14527	1009 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	IL17A	Q16552	155 aa		18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	TUBB2B	Q9BVA1	445 aa		18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	TMEM60	Q9H2L4	133 aa		18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	NWD2	Q9ULI1	1742 aa		18.19	■□□□□ 0.5
SLITRK4-201	ENST00000338017	ATP2C1	P98194	919 aa	Predicted RBP	18.18	■□□□□ 0.5
SLITRK4-201	ENST00000338017	SPATA20	Q8TB22	786 aa		18.18	■□□□□ 0.5
SLITRK4-201	ENST00000338017	MKNK2	Q9HBH9	465 aa		18.18	■□□□□ 0.5
SLITRK4-201	ENST00000338017	MROH5	Q6ZUA9	1318 aa		18.18	■□□□□ 0.5
SLITRK4-201	ENST00000338017	PRPF3	O43395	683 aa	Known RBP	18.18	■□□□□ 0.5
SLITRK4-201	ENST00000338017	TRAPPC11	Q7Z392	1133 aa		18.18	■□□□□ 0.5
SLITRK4-201	ENST00000338017	MAATS1	Q7Z4T9	603 aa		18.18	■□□□□ 0.5
SLITRK4-201	ENST00000338017	MS4A14	Q96JA4	679 aa		18.18	■□□□□ 0.5
SLITRK4-201	ENST00000338017	LGALS16	A8MUM7	142 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	MCM3	P25205	808 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	STAG2	Q8N3U4	1231 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	CAPS2	Q9BXY5	557 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	TBC1D7	Q9P0N9	293 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	C1orf167	Q5SNV9	1468 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	NKRF	O15226	690 aa	Known RBP eCLIP	18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	ERLIN2	O94905	339 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	AMPD2	Q01433	879 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	ICE2	Q659A1	982 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	TMTC3	Q6ZXV5	915 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	BLID	Q8IZY5	108 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	CAPN6	Q9Y6Q1	641 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	ARFGEF2	Q9Y6D5	1785 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	KIAA0754	O94854	1291 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	TEC	P42680	631 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	LRRC41	Q15345	812 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	SH3RF1	Q7Z6J0	888 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	CDK5RAP3	Q96JB5	506 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	TCP11L1	Q9NUJ3	509 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	WDR17	Q8IZU2	1322 aa		18.17	■□□□□ 0.5
SLITRK4-201	ENST00000338017	NUTM2B	A6NNL0	878 aa	Predicted RBP	18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	NUTM2E	B1AL46	878 aa	Predicted RBP	18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	HSF2BP	O75031	334 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	RASSF7	Q02833	373 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	CCDC152	Q4G0S7	254 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	CAVIN4	Q5BKX8	364 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	WDR59	Q6PJI9	974 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	DYNLL2	Q96FJ2	89 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	MYO1A	Q9UBC5	1043 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	PACSIN2	Q9UNF0	486 aa	Predicted RBP	18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	SEC23A	Q15436	765 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	IQCE	Q6IPM2	695 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	C8orf74	Q6P047	294 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	PDXDC2P	Q6P474	469 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	IRF2BP1	Q8IU81	584 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	EHBP1	Q8NDI1	1231 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	TMEM94	Q12767	1356 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	FAM205A	Q6ZU69	1335 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	KRT14	P02533	472 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	TXK	P42681	527 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	MAGEA1	P43355	309 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	DNM2	P50570	870 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	TFAP4	Q01664	338 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	TRIM28	Q13263	835 aa	Known RBP	18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	CCDC155	Q8N6L0	562 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	DISC1	Q9NRI5	854 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	FAM169A	Q9Y6X4	670 aa		18.16	■□□□□ 0.5
SLITRK4-201	ENST00000338017	CCNT1	O60563	726 aa	Known RBP	18.15	■□□□□ 0.5
SLITRK4-201	ENST00000338017	EIF4A3	P38919	411 aa	Known RBP	18.15	■□□□□ 0.5
SLITRK4-201	ENST00000338017	TROAP	Q12815	778 aa		18.15	■□□□□ 0.5
SLITRK4-201	ENST00000338017	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	18.15	■□□□□ 0.5
SLITRK4-201	ENST00000338017	KLHL7	Q8IXQ5	586 aa		18.15	■□□□□ 0.5
SLITRK4-201	ENST00000338017	SAP30BP	Q9UHR5	308 aa	Known RBP	18.15	■□□□□ 0.5
SLITRK4-201	ENST00000338017	MYO5A	Q9Y4I1	1855 aa	Known RBP	18.15	■□□□□ 0.5
SLITRK4-201	ENST00000338017	PLCG1	P19174	1290 aa		18.15	■□□□□ 0.5
SLITRK4-201	ENST00000338017	STK4	Q13043	487 aa		18.15	■□□□□ 0.5
SLITRK4-201	ENST00000338017	ARL8A	Q96BM9	186 aa		18.15	■□□□□ 0.5
SLITRK4-201	ENST00000338017	RBM28	Q9NW13	759 aa	Known RBP	18.15	■□□□□ 0.5
SLITRK4-201	ENST00000338017	MYH10	P35580	1976 aa		18.15	■□□□□ 0.5
SLITRK4-201	ENST00000338017	BACH1	O14867	736 aa		18.14	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms