RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 PSMD1Q99460 953 aa10.42□□□□□ -0.74
FNDC3B-201ENST00000336824 DNAJC25Q9H1X3 360 aa10.42□□□□□ -0.74
FNDC3B-201ENST00000336824 CLSTN2Q9H4D0 955 aa10.42□□□□□ -0.74
FNDC3B-201ENST00000336824 PTGDRQ13258 359 aa10.42□□□□□ -0.74
FNDC3B-201ENST00000336824 PPP6R2O75170 966 aa10.42□□□□□ -0.74
FNDC3B-201ENST00000336824 ERLIN2O94905 339 aa10.42□□□□□ -0.74
FNDC3B-201ENST00000336824 USP8P40818 1118 aa10.42□□□□□ -0.74
FNDC3B-201ENST00000336824 SPAG5Q96R06 1193 aa10.42□□□□□ -0.74
FNDC3B-201ENST00000336824 RTEL1Q9NZ71 1219 aa10.42□□□□□ -0.74
FNDC3B-201ENST00000336824 LRCH2Q5VUJ6 765 aa10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 CYB5R4Q7L1T6 521 aa10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 POLR3EQ9NVU0 708 aa10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 COL16A1Q07092 1604 aaPredicted RBP10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 KIF5CO60282 957 aa10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 TECP42680 631 aa10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 ZBTB12Q9Y330 459 aaPredicted RBP10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 ANKRD62A6NC57 917 aa10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 SETQ01105 290 aaPredicted RBP10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 MYL5Q02045 173 aa10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.41□□□□□ -0.741e-6■■■■■ 169.3
FNDC3B-201ENST00000336824 HACE1Q8IYU2 909 aa10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 ADARB2Q9NS39 739 aaKnown RBP10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 C19orf81C9J6K1 198 aa10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 IFI16Q16666 785 aaKnown RBP10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 FAM83BQ5T0W9 1011 aa10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 POTEAQ6S8J7 498 aa10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 SLC44A5Q8NCS7 719 aa10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 SLC17A8Q8NDX2 589 aa10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 USP54Q70EL1 1684 aa10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 PPP2R3BQ9Y5P8 575 aa10.41□□□□□ -0.74
FNDC3B-201ENST00000336824 ABCB11O95342 1321 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 CMA1P23946 247 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 TM4SF1P30408 202 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 ANGEL2Q5VTE6 544 aaKnown RBP10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 FAM173BQ6P4H8 233 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 ATP6V0A1Q93050 837 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 ZNF577Q9BSK1 485 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 MRPL44Q9H9J2 332 aaKnown RBP10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 FAM205AQ6ZU69 1335 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 F5H6K3 240 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 ABCD1P33897 745 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 KLRC3Q07444 240 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 MYCT1Q8N699 235 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 PRPF38AQ8NAV1 312 aaKnown RBP10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 ERCC4Q92889 916 aaPredicted RBP10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 ORC2Q13416 577 aaPredicted RBP10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 PFKFB3Q16875 520 aaPredicted RBP10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 HERC4Q5GLZ8 1057 aaPredicted RBP10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 GTF3C2Q8WUA4 911 aaPredicted RBP10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 FNBP1Q96RU3 617 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 JPH2Q9BR39 696 aaPredicted RBP10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 MMRN2Q9H8L6 949 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 GGA3Q9NZ52 723 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 ONECUT3O60422 494 aaPredicted RBP10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 TOB2Q14106 344 aaPredicted RBP10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 PAF1Q8N7H5 531 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 GIMAP8Q8ND71 665 aaPredicted RBP10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 ANAPC4Q9UJX5 808 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 VIRMAQ69YN4 1812 aaKnown RBP10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 TRAF5O00463 557 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 TMOD1P28289 359 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 USP28Q96RU2 1077 aa10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 TRIM6Q9C030 488 aaPredicted RBP10.4□□□□□ -0.74
FNDC3B-201ENST00000336824 NUP98P52948 1817 aa10.4□□□□□ -0.75
FNDC3B-201ENST00000336824 LRP6O75581 1613 aa10.4□□□□□ -0.75
FNDC3B-201ENST00000336824 SSR1P43307 286 aaKnown RBP10.4□□□□□ -0.75
FNDC3B-201ENST00000336824 SPP2Q13103 211 aa10.4□□□□□ -0.75
FNDC3B-201ENST00000336824 ZEB2O60315 1214 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 RNF207Q6ZRF8 634 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 TBCKQ8TEA7 893 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 NEK11Q8NG66 645 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 GOLGA5Q8TBA6 731 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 AP5M1Q9H0R1 490 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 NRBP2Q9NSY0 501 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 MRVI1Q9Y6F6 885 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 SPDYE4A6NLX3 237 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 CETN3O15182 167 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 GCNT3O95395 438 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 HOXA7P31268 230 aaPredicted RBP10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 PAK1Q13153 545 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 MIS18BP1Q6P0N0 1132 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 COA7Q96BR5 231 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 TRPC6Q9Y210 931 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 SYNRGQ9UMZ2 1314 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 CDR1P51861 262 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 C9orf131Q5VYM1 1079 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 EHBP1Q8NDI1 1231 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 PUF60Q9UHX1 559 aaKnown RBP10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 USP17L15C9J2P7 530 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 USP17L13C9JLJ4 530 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 USP17L11C9JVI0 530 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 USP17L18D6R9N7 530 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 USP17L22D6RA61 530 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 USP17L17D6RBQ6 530 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 USP17L19D6RCP7 530 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 USP17L20D6RJB6 530 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 CYLC1P35663 651 aaPredicted RBP10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 USP17L24Q0WX57 530 aa10.39□□□□□ -0.75
FNDC3B-201ENST00000336824 CPLX3Q8WVH0 158 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms