RNA–Protein interactions for RNA: ENST00000335798.8

UBE2E2-201, Transcript of ubiquitin conjugating enzyme E2 E2, humanhuman

TSL 1 (best)

Gene UBE2E2, Length 1,330 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2-201ENST00000335798 SPATC1LQ9H0A9 340 aa22.58■■□□□ 1.21
UBE2E2-201ENST00000335798 CNTNAP5Q8WYK1 1306 aa22.58■■□□□ 1.21
UBE2E2-201ENST00000335798 ZNF236Q9UL36 1845 aa22.58■■□□□ 1.21
UBE2E2-201ENST00000335798 ST18O60284 1047 aa22.57■■□□□ 1.2
UBE2E2-201ENST00000335798 PFKFB2O60825 505 aa22.57■■□□□ 1.2
UBE2E2-201ENST00000335798 HSPA8P11142 646 aaKnown RBP22.57■■□□□ 1.2
UBE2E2-201ENST00000335798 CCT2P78371 535 aaKnown RBP22.57■■□□□ 1.2
UBE2E2-201ENST00000335798 SCRN1Q12765 414 aa22.57■■□□□ 1.2
UBE2E2-201ENST00000335798 NOL8Q76FK4 1167 aaKnown RBP22.57■■□□□ 1.2
UBE2E2-201ENST00000335798 NCOA5Q9HCD5 579 aaKnown RBP22.57■■□□□ 1.2
UBE2E2-201ENST00000335798 LIMCH1Q9UPQ0 1083 aa22.57■■□□□ 1.2
UBE2E2-201ENST00000335798 LCTP09848 1927 aa22.57■■□□□ 1.2
UBE2E2-201ENST00000335798 CCDC196A0A1B0GTZ2 297 aa22.57■■□□□ 1.2
UBE2E2-201ENST00000335798 ZBED4O75132 1171 aa22.57■■□□□ 1.2
UBE2E2-201ENST00000335798 CAP1Q01518 475 aa22.57■■□□□ 1.2
UBE2E2-201ENST00000335798 ST3GAL1Q11201 340 aa22.57■■□□□ 1.2
UBE2E2-201ENST00000335798 CDC37Q16543 378 aaPredicted RBP22.57■■□□□ 1.2
UBE2E2-201ENST00000335798 ICAM1P05362 532 aa22.56■■□□□ 1.2
UBE2E2-201ENST00000335798 CTGFP29279 349 aa22.56■■□□□ 1.2
UBE2E2-201ENST00000335798 SP3Q02447 781 aa22.56■■□□□ 1.2
UBE2E2-201ENST00000335798 STK3Q13188 491 aa22.56■■□□□ 1.2
UBE2E2-201ENST00000335798 QRICH1Q2TAL8 776 aa22.56■■□□□ 1.2
UBE2E2-201ENST00000335798 RIOX2Q8IUF8 465 aa22.56■■□□□ 1.2
UBE2E2-201ENST00000335798 ZNF296Q8WUU4 475 aaPredicted RBP22.56■■□□□ 1.2
UBE2E2-201ENST00000335798 MOV10L1Q9BXT6 1211 aaKnown RBP22.56■■□□□ 1.2
UBE2E2-201ENST00000335798 TEX13BQ9BXU2 312 aa22.56■■□□□ 1.2
UBE2E2-201ENST00000335798 PORCNQ9H237 461 aa22.56■■□□□ 1.2
UBE2E2-201ENST00000335798 RAVER2Q9HCJ3 691 aaKnown RBP22.56■■□□□ 1.2
UBE2E2-201ENST00000335798 PLXNA1Q9UIW2 1896 aa22.56■■□□□ 1.2
UBE2E2-201ENST00000335798 PPP1R11O60927 126 aaPredicted RBP22.55■■□□□ 1.2
UBE2E2-201ENST00000335798 STAT3P40763 770 aa22.55■■□□□ 1.2
UBE2E2-201ENST00000335798 LACTBP83111 547 aaPredicted RBP22.55■■□□□ 1.2
UBE2E2-201ENST00000335798 CCDC174Q6PII3 467 aa22.55■■□□□ 1.2
UBE2E2-201ENST00000335798 CPXCR1Q8N123 301 aa22.55■■□□□ 1.2
UBE2E2-201ENST00000335798 GTF3C6Q969F1 213 aa22.55■■□□□ 1.2
UBE2E2-201ENST00000335798 PIGSQ96S52 555 aa22.55■■□□□ 1.2
UBE2E2-201ENST00000335798 SLKQ9H2G2 1235 aaPredicted RBP22.55■■□□□ 1.2
UBE2E2-201ENST00000335798 VAT1LQ9HCJ6 419 aa22.55■■□□□ 1.2
UBE2E2-201ENST00000335798 RIPK3Q9Y572 518 aa22.55■■□□□ 1.2
UBE2E2-201ENST00000335798 ZBTB5O15062 677 aa22.54■■□□□ 1.2
UBE2E2-201ENST00000335798 IFNAR1P17181 557 aa22.54■■□□□ 1.2
UBE2E2-201ENST00000335798 SNRNP48Q6IEG0 339 aaKnown RBP22.54■■□□□ 1.2
UBE2E2-201ENST00000335798 SHCBP1Q8NEM2 672 aa22.54■■□□□ 1.2
UBE2E2-201ENST00000335798 AGBL1Q96MI9 1066 aa22.54■■□□□ 1.2
UBE2E2-201ENST00000335798 DHX16O60231 1041 aaKnown RBP22.53■■□□□ 1.2
UBE2E2-201ENST00000335798 FKTNO75072 461 aa22.53■■□□□ 1.2
UBE2E2-201ENST00000335798 TAL1P17542 331 aaPredicted RBP22.53■■□□□ 1.2
UBE2E2-201ENST00000335798 CCNA1P78396 465 aa22.53■■□□□ 1.2
UBE2E2-201ENST00000335798 PLS1Q14651 629 aa22.53■■□□□ 1.2
UBE2E2-201ENST00000335798 CCDC82Q8N4S0 544 aa22.53■■□□□ 1.2
UBE2E2-201ENST00000335798 NECAB1Q8N987 351 aa22.53■■□□□ 1.2
UBE2E2-201ENST00000335798 ARHGAP39Q9C0H5 1083 aa22.53■■□□□ 1.2
UBE2E2-201ENST00000335798 EFCC1Q9HA90 598 aa22.53■■□□□ 1.2
UBE2E2-201ENST00000335798 PNMA6FA0A0J9YX94 578 aa22.52■■□□□ 1.2
UBE2E2-201ENST00000335798 SLC25A27O95847 323 aa22.52■■□□□ 1.2
UBE2E2-201ENST00000335798 ERCC3P19447 782 aa22.52■■□□□ 1.2
UBE2E2-201ENST00000335798 CTCFP49711 727 aaPredicted RBP22.52■■□□□ 1.2
UBE2E2-201ENST00000335798 MCM2P49736 904 aa22.52■■□□□ 1.2
UBE2E2-201ENST00000335798 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.52■■□□□ 1.2
UBE2E2-201ENST00000335798 HOMER1Q86YM7 354 aa22.52■■□□□ 1.2
UBE2E2-201ENST00000335798 ZSCAN31Q96LW9 406 aaPredicted RBP22.52■■□□□ 1.2
UBE2E2-201ENST00000335798 SH2B1Q9NRF2 756 aaPredicted RBP22.52■■□□□ 1.2
UBE2E2-201ENST00000335798 CTDP1Q9Y5B0 961 aaPredicted RBP22.52■■□□□ 1.2
UBE2E2-201ENST00000335798 CTDNEP1O95476 244 aa22.51■■□□□ 1.19
UBE2E2-201ENST00000335798 CD99L2Q8TCZ2 262 aa22.51■■□□□ 1.19
UBE2E2-201ENST00000335798 RRP36Q96EU6 259 aaKnown RBP22.51■■□□□ 1.19
UBE2E2-201ENST00000335798 PNMA2Q9UL42 364 aa22.51■■□□□ 1.19
UBE2E2-201ENST00000335798 CCPG1Q9ULG6 757 aa22.51■■□□□ 1.19
UBE2E2-201ENST00000335798 MAPK4P31152 587 aa22.5■■□□□ 1.19
UBE2E2-201ENST00000335798 COPB2P35606 906 aa22.5■■□□□ 1.19
UBE2E2-201ENST00000335798 LBX1P52954 281 aa22.5■■□□□ 1.19
UBE2E2-201ENST00000335798 PHKBQ93100 1093 aa22.5■■□□□ 1.19
UBE2E2-201ENST00000335798 TRIM47Q96LD4 638 aa22.5■■□□□ 1.19
UBE2E2-201ENST00000335798 AMNQ9BXJ7 453 aa22.5■■□□□ 1.19
UBE2E2-201ENST00000335798 RNF26Q9BY78 433 aaPredicted RBP22.5■■□□□ 1.19
UBE2E2-201ENST00000335798 MROH8Q9H579 483 aa22.5■■□□□ 1.19
UBE2E2-201ENST00000335798 hCG_1642624A0A1W2PR95 340 aa22.49■■□□□ 1.19
UBE2E2-201ENST00000335798 PRPF3O43395 683 aaKnown RBP22.49■■□□□ 1.19
UBE2E2-201ENST00000335798 TKFCQ3LXA3 575 aa22.49■■□□□ 1.19
UBE2E2-201ENST00000335798 GPR142Q7Z601 462 aa22.49■■□□□ 1.19
UBE2E2-201ENST00000335798 FBXO11Q86XK2 927 aa22.49■■□□□ 1.19
UBE2E2-201ENST00000335798 PIBF1Q8WXW3 757 aa22.49■■□□□ 1.19
UBE2E2-201ENST00000335798 ERO1AQ96HE7 468 aa22.49■■□□□ 1.19
UBE2E2-201ENST00000335798 TMX3Q96JJ7 454 aa22.49■■□□□ 1.19
UBE2E2-201ENST00000335798 V9GY48 417 aaPredicted RBP22.49■■□□□ 1.19
UBE2E2-201ENST00000335798 CPLX1O14810 134 aa22.48■■□□□ 1.19
UBE2E2-201ENST00000335798 FMNL1O95466 1100 aaPredicted RBP22.48■■□□□ 1.19
UBE2E2-201ENST00000335798 ALAS1P13196 640 aa22.48■■□□□ 1.19
UBE2E2-201ENST00000335798 PSMC4P43686 418 aa22.48■■□□□ 1.19
UBE2E2-201ENST00000335798 PKN1Q16512 942 aa22.48■■□□□ 1.19
UBE2E2-201ENST00000335798 MUM1L1Q5H9M0 696 aa22.48■■□□□ 1.19
UBE2E2-201ENST00000335798 NCAPG2Q86XI2 1143 aa22.48■■□□□ 1.19
UBE2E2-201ENST00000335798 NSUN7Q8NE18 718 aaKnown RBP22.48■■□□□ 1.19
UBE2E2-201ENST00000335798 CHST13Q8NET6 341 aa22.48■■□□□ 1.19
UBE2E2-201ENST00000335798 CLEC4DQ8WXI8 215 aa22.48■■□□□ 1.19
UBE2E2-201ENST00000335798 SNX21Q969T3 373 aa22.48■■□□□ 1.19
UBE2E2-201ENST00000335798 RNF146Q9NTX7 359 aa22.48■■□□□ 1.19
UBE2E2-201ENST00000335798 ABCB11O95342 1321 aa22.47■■□□□ 1.19
UBE2E2-201ENST00000335798 OPLAHO14841 1288 aa22.47■■□□□ 1.19
UBE2E2-201ENST00000335798 PPFIA3O75145 1194 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms