RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 KRT86O43790 486 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 CCNT1O60563 726 aaKnown RBP7.66□□□□□ -1.18
SF3B1-201ENST00000335508 TM4SF1P30408 202 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 SAMD3Q8N6K7 520 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 SH3RF3Q8TEJ3 882 aaPredicted RBP7.66□□□□□ -1.18
SF3B1-201ENST00000335508 SLC7A3Q8WY07 619 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 CEP95Q96GE4 821 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 RUFY1Q96T51 708 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 NUP58Q9BVL2 599 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 IDI2Q9BXS1 227 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 AGXT2Q9BYV1 514 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 TTC12Q9H892 705 aaPredicted RBP7.66□□□□□ -1.18
SF3B1-201ENST00000335508 A0A0G2JLW4 131 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 SKILP12757 684 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 PRKG1Q13976 671 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 KIF22Q14807 665 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 XRRA1Q6P2D8 792 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 MIER3Q7Z3K6 550 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 LRP10Q7Z4F1 713 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 C2orf69Q8N8R5 385 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 TEKT3Q9BXF9 490 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 NOD1Q9Y239 953 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 hCG_1642624A0A1W2PR95 340 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 ANKRD62A6NC57 917 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 PHACTR2O75167 634 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 GNA14O95837 355 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 TOB2Q14106 344 aaPredicted RBP7.66□□□□□ -1.18
SF3B1-201ENST00000335508 AOC3Q16853 763 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 USP17L2Q6R6M4 530 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 NACC1Q96RE7 527 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 ANO3Q9BYT9 981 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 TBC1D22BQ9NU19 505 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 FRMD4BQ9Y2L6 1034 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 FLT1P17948 1338 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 FKBP3Q00688 224 aaKnown RBP7.66□□□□□ -1.18
SF3B1-201ENST00000335508 PAK1Q13153 545 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 TRMT1LQ7Z2T5 733 aaKnown RBP7.66□□□□□ -1.18
SF3B1-201ENST00000335508 CDAN1Q8IWY9 1227 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 HACE1Q8IYU2 909 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 TBC1D5Q92609 795 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 MRFAP1L1Q96HT8 127 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 PIGSQ96S52 555 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 WRNIP1Q96S55 665 aa7.66□□□□□ -1.18
SF3B1-201ENST00000335508 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.66□□□□□ -1.18
SF3B1-201ENST00000335508 GDF11O95390 407 aa7.65□□□□□ -1.18
SF3B1-201ENST00000335508 TMOD1P28289 359 aa7.65□□□□□ -1.18
SF3B1-201ENST00000335508 CXCL9Q07325 125 aa7.65□□□□□ -1.18
SF3B1-201ENST00000335508 SRRTQ9BXP5 876 aaKnown RBP7.65□□□□□ -1.18
SF3B1-201ENST00000335508 RIC8AQ9NPQ8 531 aa7.65□□□□□ -1.18
SF3B1-201ENST00000335508 MRVI1Q9Y6F6 885 aa7.65□□□□□ -1.18
SF3B1-201ENST00000335508 NFAT5O94916 1531 aa7.65□□□□□ -1.18
SF3B1-201ENST00000335508 MYCLP12524 364 aaPredicted RBP7.65□□□□□ -1.18
SF3B1-201ENST00000335508 ZNF543Q08ER8 600 aa7.65□□□□□ -1.18
SF3B1-201ENST00000335508 KIF5AQ12840 1032 aa7.65□□□□□ -1.18
SF3B1-201ENST00000335508 PRR16Q569H4 304 aa7.65□□□□□ -1.18
SF3B1-201ENST00000335508 FASTKD5Q7L8L6 764 aaKnown RBP7.65□□□□□ -1.18
SF3B1-201ENST00000335508 NSUN6Q8TEA1 469 aaKnown RBP7.65□□□□□ -1.18
SF3B1-201ENST00000335508 CCDC51Q96ER9 411 aa7.65□□□□□ -1.18
SF3B1-201ENST00000335508 MXD3Q9BW11 206 aa7.65□□□□□ -1.18
SF3B1-201ENST00000335508 VCPKMTQ9H867 229 aa7.65□□□□□ -1.18
SF3B1-201ENST00000335508 SRPRBQ9Y5M8 271 aaKnown RBP7.65□□□□□ -1.18
SF3B1-201ENST00000335508 ADAMTSL3P82987 1691 aa7.65□□□□□ -1.18
SF3B1-201ENST00000335508 KRT76Q01546 638 aa7.65□□□□□ -1.18
SF3B1-201ENST00000335508 CDC37Q16543 378 aaPredicted RBP7.65□□□□□ -1.18
SF3B1-201ENST00000335508 ABCB11O95342 1321 aa7.65□□□□□ -1.18
SF3B1-201ENST00000335508 USH1GQ495M9 461 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 MYOCDQ8IZQ8 938 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 VGLL2Q8N8G2 317 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 SLC44A5Q8NCS7 719 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 NEK11Q8NG66 645 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 TBCKQ8TEA7 893 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 NAA15Q9BXJ9 866 aaKnown RBP7.65□□□□□ -1.19
SF3B1-201ENST00000335508 MMRN2Q9H8L6 949 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 LY9Q9HBG7 655 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 ARMCX3Q9UH62 379 aaPredicted RBP7.65□□□□□ -1.19
SF3B1-201ENST00000335508 KIAA0100Q14667 2235 aaKnown RBP7.65□□□□□ -1.19
SF3B1-201ENST00000335508 IKBKBO14920 756 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 ARHGAP6O43182 974 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 CD2BP2O95400 341 aaKnown RBP7.65□□□□□ -1.19
SF3B1-201ENST00000335508 AKR1B1P15121 316 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 OSBPP22059 807 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 USP11P51784 963 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 RESTQ13127 1097 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 TBC1D10BQ4KMP7 808 aaPredicted RBP7.65□□□□□ -1.19
SF3B1-201ENST00000335508 C16orf86Q6ZW13 317 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 SPICE1Q8N0Z3 855 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 LMBR1Q8WVP7 490 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 BCL2L12Q9HB09 334 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 TMEM63CQ9P1W3 806 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 FEM1BQ9UK73 627 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 PPP2R3BQ9Y5P8 575 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 SLIT2O94813 1529 aa7.65□□□□□ -1.19
SF3B1-201ENST00000335508 STX10O60499 249 aa7.64□□□□□ -1.19
SF3B1-201ENST00000335508 CCDC175P0C221 793 aa7.64□□□□□ -1.19
SF3B1-201ENST00000335508 RASA1P20936 1047 aa7.64□□□□□ -1.19
SF3B1-201ENST00000335508 ALCAMQ13740 583 aa7.64□□□□□ -1.19
SF3B1-201ENST00000335508 COG2Q14746 738 aa7.64□□□□□ -1.19
SF3B1-201ENST00000335508 FAM178BQ8IXR5 827 aa7.64□□□□□ -1.19
SF3B1-201ENST00000335508 MB21D1Q8N884 522 aa7.64□□□□□ -1.19
SF3B1-201ENST00000335508 LARP4BQ92615 738 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms