RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 GSTA2P09210 222 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 ACTN1P12814 892 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 MX2P20592 715 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 C4BPBP20851 252 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 TRAPPC10P48553 1259 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 MRPS35P82673 323 aaKnown RBP6.02□□□□□ -1.45
PTPRB-202ENST00000334414 ZNF274Q96GC6 653 aaPredicted RBP6.02□□□□□ -1.45
PTPRB-202ENST00000334414 ZBTB40Q9NUA8 1239 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 ADRM1Q16186 407 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 NCAPH2Q6IBW4 605 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 PARP9Q8IXQ6 854 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 PPWD1Q96BP3 646 aaKnown RBP6.02□□□□□ -1.45
PTPRB-202ENST00000334414 NUDT16Q96DE0 195 aaKnown RBP6.02□□□□□ -1.45
PTPRB-202ENST00000334414 FAM210AQ96ND0 272 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 RNF123Q5XPI4 1314 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 RARS2Q5T160 578 aaKnown RBP6.02□□□□□ -1.45
PTPRB-202ENST00000334414 DSCC1Q9BVC3 393 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 ECEL1O95672 775 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 ATP6V1E1P36543 226 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 NYXQ9GZU5 481 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 ANO9A1A5B4 782 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 CCDC188H7C350 402 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 S100BP04271 92 aaPredicted RBP6.02□□□□□ -1.45
PTPRB-202ENST00000334414 MORC3Q14149 939 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 SESTD1Q86VW0 696 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 DCAF8L1A6NGE4 600 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 PCP11498 1178 aaKnown RBP6.02□□□□□ -1.45
PTPRB-202ENST00000334414 KCNJ6P48051 423 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 IGBP1P78318 339 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 MTX1Q13505 466 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 TBCCQ15814 346 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 MPP6Q9NZW5 540 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 UHRF1BP1LA0JNW5 1464 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 KDM1AO60341 852 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 CTNND1O60716 968 aaKnown RBP6.02□□□□□ -1.45
PTPRB-202ENST00000334414 INHBAP08476 426 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 TFAP4Q01664 338 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 OSBPL9Q96SU4 736 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 TTC37Q6PGP7 1564 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 DAPK3O43293 454 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 CCNT1O60563 726 aaKnown RBP6.02□□□□□ -1.45
PTPRB-202ENST00000334414 FAM133BQ5BKY9 247 aaKnown RBP6.02□□□□□ -1.45
PTPRB-202ENST00000334414 DCUN1D2Q6PH85 259 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 HAUS7Q99871 368 aa6.02□□□□□ -1.45
PTPRB-202ENST00000334414 TADA3O75528 432 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 NNTQ13423 1086 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 KLHL7Q8IXQ5 586 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 DNAJC17Q9NVM6 304 aaKnown RBP6.01□□□□□ -1.45
PTPRB-202ENST00000334414 SENP1Q9P0U3 644 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 KDM5BQ9UGL1 1544 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 NSFP46459 744 aaKnown RBP6.01□□□□□ -1.45
PTPRB-202ENST00000334414 CENPUQ71F23 418 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 THOC1Q96FV9 657 aaKnown RBP6.01□□□□□ -1.45
PTPRB-202ENST00000334414 F8W8V4 182 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 MCF2LO15068 1137 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 KRT10P13645 584 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 LRMPQ12912 555 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 PRPSAP1Q14558 356 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 SLC30A9Q6PML9 568 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 SARM1Q6SZW1 724 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 KSR2Q6VAB6 950 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 ICA1LQ8NDH6 482 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 CCPG1Q9ULG6 757 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 ATP2B3Q16720 1220 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 ZC3H18Q86VM9 953 aaKnown RBP6.01□□□□□ -1.45
PTPRB-202ENST00000334414 NECAB1Q8N987 351 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 TMEM87AQ8NBN3 555 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 POLR3EQ9NVU0 708 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 SEMA3EO15041 775 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 BAG2O95816 211 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 AP1B1Q10567 949 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 TTC38Q5R3I4 469 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 PCGF5Q86SE9 256 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 C2CD5Q86YS7 1000 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.01□□□□□ -1.45
PTPRB-202ENST00000334414 STX8Q9UNK0 236 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 MED23Q9ULK4 1368 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 ATP1A2P50993 1020 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 MED21Q13503 144 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 AOC3Q16853 763 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 SLFN12Q8IYM2 578 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 ZNF653Q96CK0 615 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 AK8Q96MA6 479 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 MRFAP1Q9Y605 127 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 SYNGAP1Q96PV0 1343 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 GOLGA8MH3BSY2 632 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 GTPBP6O43824 516 aaPredicted RBP6.01□□□□□ -1.45
PTPRB-202ENST00000334414 APOA1P02647 267 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 ATF7P17544 494 aaPredicted RBP6.01□□□□□ -1.45
PTPRB-202ENST00000334414 PPP4R3CPQ6ZMV5 832 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 NEK8Q86SG6 692 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 OR9Q1Q8NGQ5 310 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 TRIM55Q9BYV6 548 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 TRPC6Q9Y210 931 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 SLC27A2O14975 620 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 KRT75O95678 551 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 LONP1P36776 959 aaKnown RBP6.01□□□□□ -1.45
PTPRB-202ENST00000334414 PSMD6Q15008 389 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 TYW1BQ6NUM6 668 aa6.01□□□□□ -1.45
PTPRB-202ENST00000334414 UBE3BQ7Z3V4 1068 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms