RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 HS2ST1Q7LGA3 356 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 C10orf107Q8IVU9 208 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 MFN1Q8IWA4 741 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 GPR161Q8N6U8 529 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 MCRS1Q96EZ8 462 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 SRPK1Q96SB4 655 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 CHMP1AQ9HD42 196 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 NBPF26B4DH59 902 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 PPIP5K2O43314 1243 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 EPS8Q12929 822 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 NBPF14Q5TI25 921 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 C22orf23Q9BZE7 217 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 INTS13Q9NVM9 706 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 ING3Q9NXR8 418 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 TMCC3Q9ULS5 477 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 TTF2Q9UNY4 1162 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 EVC2Q86UK5 1308 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 TNNC1P63316 161 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 NEK11Q8NG66 645 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 KIFC1Q9BW19 673 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 TRIM31Q9BZY9 425 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 PPME1Q9Y570 386 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 HIP1O00291 1037 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 ASIC2Q16515 512 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 C6orf10Q5SRN2 563 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 ARHGEF25Q86VW2 580 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 CCT7Q99832 543 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 JPH2Q9BR39 696 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 BAIAP2L1Q9UHR4 511 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 SPG7Q9UQ90 795 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 U3KPZ7 1027 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 PGM3O95394 542 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 KIAA0408Q6ZU52 694 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 AHI1Q8N157 1196 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 MTRQ99707 1265 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 CARD14Q9BXL6 1004 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 SMCO2A6NFE2 343 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 PRLP01236 227 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 PYGLP06737 847 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 ADKP55263 362 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 KRT81Q14533 505 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 CNDP2Q96KP4 475 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.62□□□□□ -1.351e-6■■□□□ 12.6
CDC42BPA-201ENST00000334218 DHX29Q7Z478 1369 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 HECW1Q76N89 1606 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 MYCP01106 439 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 CYLC1P35663 651 aaPredicted RBP6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 BCAP31P51572 246 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 ALDH18A1P54886 795 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 ICA1Q05084 483 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 RAD51AP2Q09MP3 1159 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 LRRC8EQ6NSJ5 796 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 PAPOLBQ9NRJ5 636 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 PNO1Q9NRX1 252 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 MRPL39Q9NYK5 338 aaKnown RBP6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 SYNPO2Q9UMS6 1093 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 MAPRE2Q15555 327 aa6.62□□□□□ -1.35
CDC42BPA-201ENST00000334218 CCDC85CA6NKD9 419 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 GOLGA8KD6RF30 607 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 GARTP22102 1010 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 MCM7P33993 719 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 NOLC1Q14978 699 aaKnown RBP eCLIP6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 ADRM1Q16186 407 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 TXNDC11Q6PKC3 985 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 TMC5Q6UXY8 1006 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 SAMD3Q8N6K7 520 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 VTI1AQ96AJ9 217 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 SNF8Q96H20 258 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 KRT84Q9NSB2 600 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 SERPINB13Q9UIV8 391 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 RUSC2Q8N2Y8 1516 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 RAPGEF5Q92565 580 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 FAM213AQ9BRX8 229 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 TRIM37O94972 964 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 POLR2FP61218 127 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 LMBR1Q8WVP7 490 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 DHTKD1Q96HY7 919 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 MAGED2Q9UNF1 606 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 C16orf96A6NNT2 1141 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 SERPINB2P05120 415 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 SDSP20132 328 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 ATP6V1C2Q8NEY4 427 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 SAMSN1Q9NSI8 373 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 SLC10A5Q5PT55 438 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 TCHHL1Q5QJ38 904 aaPredicted RBP6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 GALNT6Q8NCL4 622 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 RNF169Q8NCN4 708 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 ART5Q96L15 291 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 SSX2IPQ9Y2D8 614 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 GPRASP1Q5JY77 1395 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 CFAP73A6NFT4 308 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 KRT14P02533 472 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 CLTBP09497 229 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 EIF3BP55884 814 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 PUDPQ08623 228 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 RAPGEF1Q13905 1077 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 DIS3LQ8TF46 1054 aaKnown RBP6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 AIF1LQ9BQI0 150 aa6.61□□□□□ -1.35
CDC42BPA-201ENST00000334218 IFIH1Q9BYX4 1025 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms