RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 HDAC9Q9UKV0 1011 aa10.2□□□□□ -0.78
COPB2-201ENST00000333188 MYO1BO43795 1136 aa10.2□□□□□ -0.78
COPB2-201ENST00000333188 SHMT1P34896 483 aa10.2□□□□□ -0.78
COPB2-201ENST00000333188 CALCRLQ16602 461 aa10.2□□□□□ -0.78
COPB2-201ENST00000333188 CCDC12Q8WUD4 166 aaPredicted RBP10.2□□□□□ -0.78
COPB2-201ENST00000333188 TRIM47Q96LD4 638 aa10.2□□□□□ -0.78
COPB2-201ENST00000333188 DESI2Q9BSY9 194 aa10.2□□□□□ -0.78
COPB2-201ENST00000333188 ZSWIM4Q9H7M6 989 aa10.2□□□□□ -0.78
COPB2-201ENST00000333188 SLC39A2Q9NP94 309 aa10.2□□□□□ -0.78
COPB2-201ENST00000333188 PODXL2Q9NZ53 605 aa10.2□□□□□ -0.78
COPB2-201ENST00000333188 LRWD1Q9UFC0 647 aa10.2□□□□□ -0.78
COPB2-201ENST00000333188 MKRN1Q9UHC7 482 aaKnown RBP10.2□□□□□ -0.78
COPB2-201ENST00000333188 BTAF1O14981 1849 aa10.2□□□□□ -0.78
COPB2-201ENST00000333188 CENPFP49454 3210 aa10.19□□□□□ -0.78
COPB2-201ENST00000333188 BMP6P22004 513 aa10.19□□□□□ -0.78
COPB2-201ENST00000333188 STAT3P40763 770 aa10.19□□□□□ -0.78
COPB2-201ENST00000333188 PPP2R5BQ15173 497 aa10.19□□□□□ -0.78
COPB2-201ENST00000333188 NEK8Q86SG6 692 aa10.19□□□□□ -0.78
COPB2-201ENST00000333188 KANSL2Q9H9L4 492 aa10.19□□□□□ -0.78
COPB2-201ENST00000333188 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.19□□□□□ -0.78
COPB2-201ENST00000333188 BARHL2Q9NY43 387 aa10.19□□□□□ -0.78
COPB2-201ENST00000333188 MYH3P11055 1940 aa10.19□□□□□ -0.78
COPB2-201ENST00000333188 STXBP3O00186 592 aa10.19□□□□□ -0.78
COPB2-201ENST00000333188 PCP11498 1178 aaKnown RBP10.19□□□□□ -0.78
COPB2-201ENST00000333188 CCDC93Q567U6 631 aa10.19□□□□□ -0.78
COPB2-201ENST00000333188 DACT2Q5SW24 774 aa10.19□□□□□ -0.78
COPB2-201ENST00000333188 CC2D2BQ6DHV5 1058 aa10.19□□□□□ -0.78
COPB2-201ENST00000333188 CABP7Q86V35 215 aa10.19□□□□□ -0.78
COPB2-201ENST00000333188 SNX29Q8TEQ0 813 aa10.19□□□□□ -0.78
COPB2-201ENST00000333188 EGFRP00533 1210 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 TPM3P06753 285 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 RASSF7Q02833 373 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 QRICH1Q2TAL8 776 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 FAM83BQ5T0W9 1011 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 STRIP1Q5VSL9 837 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 ARHGAP27Q6ZUM4 889 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 NELFCDQ8IXH7 590 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 GLIS2Q9BZE0 524 aaPredicted RBP10.18□□□□□ -0.78
COPB2-201ENST00000333188 FAM198AQ9UFP1 575 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 PLCG1P19174 1290 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 PDE4DQ08499 809 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 IL17AQ16552 155 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 TBC1D5Q92609 795 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 MMRN2Q9H8L6 949 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 JMJD4Q9H9V9 463 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 TUBGCP6Q96RT7 1819 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 ASTN2O75129 1339 aaPredicted RBP10.18□□□□□ -0.78
COPB2-201ENST00000333188 PALM3A6NDB9 673 aaPredicted RBP10.18□□□□□ -0.78
COPB2-201ENST00000333188 SPDYE3A6NKU9 549 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 CDC37Q16543 378 aaPredicted RBP10.18□□□□□ -0.78
COPB2-201ENST00000333188 WDR78Q5VTH9 848 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 NCAPH2Q6IBW4 605 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 CALML4Q96GE6 196 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.18□□□□□ -0.78
COPB2-201ENST00000333188 SAMM50Q9Y512 469 aa10.18□□□□□ -0.78
COPB2-201ENST00000333188 N4BP2Q86UW6 1770 aaPredicted RBP10.18□□□□□ -0.78
COPB2-201ENST00000333188 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.18□□□□□ -0.78
COPB2-201ENST00000333188 TEX33O43247 280 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 SLC37A4O43826 429 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 OR52Z1P0C646 297 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 JAG1P78504 1218 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 MCM6Q14566 821 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 NAA30Q147X3 362 aaPredicted RBP10.17□□□□□ -0.78
COPB2-201ENST00000333188 PPFIBP1Q86W92 1011 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 LRRC8AQ8IWT6 810 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 FERMT2Q96AC1 680 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 PAPPAQ13219 1627 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 OFD1O75665 1012 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 SLFN14P0C7P3 912 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 CD44P16070 742 aaKnown RBP10.17□□□□□ -0.78
COPB2-201ENST00000333188 MRPL12P52815 198 aaKnown RBP10.17□□□□□ -0.78
COPB2-201ENST00000333188 NPY5RQ15761 445 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 TMEM266Q2M3C6 531 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 SH3BP5LQ7L8J4 393 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 DNAJC18Q9H819 358 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 LZTFL1Q9NQ48 299 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 PIM2Q9P1W9 311 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 NDUFB10O96000 172 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 DNA2P51530 1060 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 PTPN14Q15678 1187 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 DALRD3Q5D0E6 543 aaKnown RBP10.17□□□□□ -0.78
COPB2-201ENST00000333188 CYP2W1Q8TAV3 490 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 NELFBQ8WX92 580 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 EXOC1Q9NV70 894 aa10.17□□□□□ -0.78
COPB2-201ENST00000333188 SYNRGQ9UMZ2 1314 aa10.16□□□□□ -0.78
COPB2-201ENST00000333188 SFI1A8K8P3 1242 aa10.16□□□□□ -0.78
COPB2-201ENST00000333188 FCER1AP12319 257 aa10.16□□□□□ -0.78
COPB2-201ENST00000333188 CXCL9Q07325 125 aa10.16□□□□□ -0.78
COPB2-201ENST00000333188 TTLL12Q14166 644 aaPredicted RBP10.16□□□□□ -0.78
COPB2-201ENST00000333188 FILIP1LQ4L180 1135 aa10.16□□□□□ -0.78
COPB2-201ENST00000333188 TMC4Q7Z404 712 aa10.16□□□□□ -0.78
COPB2-201ENST00000333188 CUL5Q93034 780 aa10.16□□□□□ -0.78
COPB2-201ENST00000333188 CAMKK2Q96RR4 588 aa10.16□□□□□ -0.78
COPB2-201ENST00000333188 DDX25Q9UHL0 483 aaKnown RBP10.16□□□□□ -0.78
COPB2-201ENST00000333188 TCEAL9Q9UHQ7 104 aa10.16□□□□□ -0.78
COPB2-201ENST00000333188 DACH1Q9UI36 760 aa10.16□□□□□ -0.78
COPB2-201ENST00000333188 ACTN4O43707 911 aaKnown RBP10.16□□□□□ -0.78
COPB2-201ENST00000333188 ATP2C1P98194 919 aaPredicted RBP10.16□□□□□ -0.78
COPB2-201ENST00000333188 ZNF543Q08ER8 600 aa10.16□□□□□ -0.78
COPB2-201ENST00000333188 KRT79Q5XKE5 535 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms