RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 PAGR1Q9BTK6 254 aa14.43□□□□□ -0.1
VSTM4-202ENST00000332853 EXOC7Q9UPT5 735 aa14.43□□□□□ -0.1
VSTM4-202ENST00000332853 RPS6KA4O75676 772 aa14.42□□□□□ -0.1
VSTM4-202ENST00000332853 UBE2SQ16763 222 aa14.42□□□□□ -0.1
VSTM4-202ENST00000332853 KIFAP3Q92845 792 aa14.42□□□□□ -0.1
VSTM4-202ENST00000332853 IFIH1Q9BYX4 1025 aaKnown RBP14.42□□□□□ -0.1
VSTM4-202ENST00000332853 C8orf74Q6P047 294 aa14.42□□□□□ -0.1
VSTM4-202ENST00000332853 KLHL7Q8IXQ5 586 aa14.42□□□□□ -0.1
VSTM4-202ENST00000332853 TRIML1Q8N9V2 468 aa14.42□□□□□ -0.1
VSTM4-202ENST00000332853 CACNB3P54284 484 aa14.42□□□□□ -0.1
VSTM4-202ENST00000332853 ZNF354CQ86Y25 554 aa14.42□□□□□ -0.1
VSTM4-202ENST00000332853 OGFRQ9NZT2 677 aa14.42□□□□□ -0.1
VSTM4-202ENST00000332853 H7C1D1 291 aa14.42□□□□□ -0.1
VSTM4-202ENST00000332853 CDK8P49336 464 aa14.42□□□□□ -0.1
VSTM4-202ENST00000332853 CPVLQ9H3G5 476 aa14.42□□□□□ -0.1
VSTM4-202ENST00000332853 ZNF500O60304 480 aaPredicted RBP14.42□□□□□ -0.1
VSTM4-202ENST00000332853 TBC1D10BQ4KMP7 808 aaPredicted RBP14.42□□□□□ -0.1
VSTM4-202ENST00000332853 PLA2G4DQ86XP0 818 aa14.42□□□□□ -0.1
VSTM4-202ENST00000332853 MYO1AQ9UBC5 1043 aa14.42□□□□□ -0.1
VSTM4-202ENST00000332853 LRRC41Q15345 812 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 CLEC4GQ6UXB4 293 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 BCL2L12Q9HB09 334 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 ZDHHC9Q9Y397 364 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 NRXN1Q9ULB1 1477 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 ADGRB1O14514 1584 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 PRPF3O43395 683 aaKnown RBP14.41□□□□□ -0.1
VSTM4-202ENST00000332853 EAPPQ56P03 285 aaPredicted RBP14.41□□□□□ -0.1
VSTM4-202ENST00000332853 SLFN12Q8IYM2 578 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 GDAP1L1Q96MZ0 367 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 SERPINB13Q9UIV8 391 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 MAP2P11137 1827 aaKnown RBP14.41□□□□□ -0.1
VSTM4-202ENST00000332853 CEP104O60308 925 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 FLOT1O75955 427 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 CA8P35219 290 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 LIFRP42702 1097 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 NLRX1Q86UT6 975 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 OR8K1Q8NGG5 319 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 STAG1Q8WVM7 1258 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 BUB1O43683 1085 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 ASPRV1Q53RT3 343 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 MIGA2Q7L4E1 593 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 CTTNBP2NLQ9P2B4 639 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 CCPG1Q9ULG6 757 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 CDHR2Q9BYE9 1310 aa14.41□□□□□ -0.1
VSTM4-202ENST00000332853 ARHGEF1Q92888 912 aaKnown RBP14.4□□□□□ -0.1
VSTM4-202ENST00000332853 SWAP70Q9UH65 585 aa14.4□□□□□ -0.1
VSTM4-202ENST00000332853 MRPL11Q9Y3B7 192 aaKnown RBP14.4□□□□□ -0.1
VSTM4-202ENST00000332853 CASP14P31944 242 aa14.4□□□□□ -0.1
VSTM4-202ENST00000332853 COPB1P53618 953 aaKnown RBP14.4□□□□□ -0.1
VSTM4-202ENST00000332853 TRPC3Q13507 836 aa14.4□□□□□ -0.1
VSTM4-202ENST00000332853 CCDC84Q86UT8 332 aaPredicted RBP14.4□□□□□ -0.1
VSTM4-202ENST00000332853 GOLPH3LQ9H4A5 285 aa14.4□□□□□ -0.1
VSTM4-202ENST00000332853 CEP170BQ9Y4F5 1589 aaPredicted RBP14.4□□□□□ -0.1
VSTM4-202ENST00000332853 CDC27P30260 824 aa14.4□□□□□ -0.1
VSTM4-202ENST00000332853 XRCC5P13010 732 aaKnown RBP14.4□□□□□ -0.1
VSTM4-202ENST00000332853 CFAP58Q5T655 872 aa14.4□□□□□ -0.1
VSTM4-202ENST00000332853 SAMSN1Q9NSI8 373 aaKnown RBP14.4□□□□□ -0.1
VSTM4-202ENST00000332853 NARFQ9UHQ1 456 aa14.4□□□□□ -0.1
VSTM4-202ENST00000332853 MEIS1O00470 390 aa14.4□□□□□ -0.1
VSTM4-202ENST00000332853 SLC44A5Q8NCS7 719 aa14.4□□□□□ -0.1
VSTM4-202ENST00000332853 USTQ9Y2C2 406 aa14.4□□□□□ -0.1
VSTM4-202ENST00000332853 POLR2FP61218 127 aaKnown RBP14.39□□□□□ -0.11
VSTM4-202ENST00000332853 IRX3P78415 501 aaPredicted RBP14.39□□□□□ -0.11
VSTM4-202ENST00000332853 PABPC4Q13310 644 aaKnown RBP eCLIP14.39□□□□□ -0.114e-6■■■■■ 41.1
VSTM4-202ENST00000332853 STOX1Q6ZVD7 989 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 CNOT6LQ96LI5 555 aaKnown RBP14.39□□□□□ -0.11
VSTM4-202ENST00000332853 MTUS1Q9ULD2 1270 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 PPLO60437 1756 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 K7ENM7 598 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 TUBB4BP68371 445 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 HINFPQ9BQA5 517 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 AZI2Q9H6S1 392 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 ABCB4P21439 1286 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 U2AF1L4Q8WU68 220 aaKnown RBP14.39□□□□□ -0.11
VSTM4-202ENST00000332853 CACTINQ8WUQ7 758 aaKnown RBP14.39□□□□□ -0.11
VSTM4-202ENST00000332853 FERMT1Q9BQL6 677 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 MMP10P09238 476 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 RBL2Q08999 1139 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 MB21D2Q8IYB1 491 aaPredicted RBP14.39□□□□□ -0.11
VSTM4-202ENST00000332853 OXER1Q8TDS5 423 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 LY9Q9HBG7 655 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 KRT19P08727 400 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 DNM2P50570 870 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 ADAM9Q13443 819 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 ERCC6LQ2NKX8 1250 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 ARHGAP27Q6ZUM4 889 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 CCDC26Q8TAB7 109 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 TIGD1Q96MW7 591 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 PSMD1Q99460 953 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 DIP2BQ9P265 1576 aa14.39□□□□□ -0.11
VSTM4-202ENST00000332853 RXRBP28702 533 aa14.38□□□□□ -0.11
VSTM4-202ENST00000332853 TNFAIP1Q13829 316 aa14.38□□□□□ -0.11
VSTM4-202ENST00000332853 XKR9Q5GH70 373 aa14.38□□□□□ -0.11
VSTM4-202ENST00000332853 LARP4BQ92615 738 aaKnown RBP14.38□□□□□ -0.11
VSTM4-202ENST00000332853 AMNQ9BXJ7 453 aa14.38□□□□□ -0.11
VSTM4-202ENST00000332853 IL25Q9H293 177 aa14.38□□□□□ -0.11
VSTM4-202ENST00000332853 SRPRBQ9Y5M8 271 aaKnown RBP14.38□□□□□ -0.11
VSTM4-202ENST00000332853 CASP1P29466 404 aa14.38□□□□□ -0.11
VSTM4-202ENST00000332853 KIF4AO95239 1232 aa14.38□□□□□ -0.11
VSTM4-202ENST00000332853 TNNI1P19237 187 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms