RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 CLEC10AQ8IUN9 316 aa19.67■□□□□ 0.74
DDX28-201ENST00000332395 A0A1B0GTH6 734 aa19.67■□□□□ 0.74
DDX28-201ENST00000332395 CTIFO43310 598 aaKnown RBP19.67■□□□□ 0.74
DDX28-201ENST00000332395 SNHG28P0DPA3 235 aa19.67■□□□□ 0.74
DDX28-201ENST00000332395 SHMT1P34896 483 aa19.67■□□□□ 0.74
DDX28-201ENST00000332395 NR1I3Q14994 352 aa19.67■□□□□ 0.74
DDX28-201ENST00000332395 DBNDD1Q9H9R9 158 aa19.67■□□□□ 0.74
DDX28-201ENST00000332395 ESYT2A0FGR8 921 aa19.66■□□□□ 0.74
DDX28-201ENST00000332395 hCG_1984214I3L0E3 225 aa19.66■□□□□ 0.74
DDX28-201ENST00000332395 CCNT1O60563 726 aaKnown RBP19.66■□□□□ 0.74
DDX28-201ENST00000332395 TTLL1O95922 423 aa19.66■□□□□ 0.74
DDX28-201ENST00000332395 UBA7P41226 1012 aa19.66■□□□□ 0.74
DDX28-201ENST00000332395 LETM2Q2VYF4 491 aa19.66■□□□□ 0.74
DDX28-201ENST00000332395 NAALADL2Q58DX5 795 aa19.66■□□□□ 0.74
DDX28-201ENST00000332395 CDKAL1Q5VV42 579 aa19.66■□□□□ 0.74
DDX28-201ENST00000332395 APTXQ7Z2E3 356 aaKnown RBP19.66■□□□□ 0.74
DDX28-201ENST00000332395 PODNQ7Z5L7 613 aa19.66■□□□□ 0.74
DDX28-201ENST00000332395 ZNF713Q8N859 430 aaPredicted RBP19.66■□□□□ 0.74
DDX28-201ENST00000332395 RASSF8Q8NHQ8 419 aa19.66■□□□□ 0.74
DDX28-201ENST00000332395 CCSER1Q9C0I3 900 aa19.66■□□□□ 0.74
DDX28-201ENST00000332395 RMND1Q9NWS8 449 aa19.66■□□□□ 0.74
DDX28-201ENST00000332395 CTNND2Q9UQB3 1225 aa19.66■□□□□ 0.74
DDX28-201ENST00000332395 KIF2AO00139 706 aaPredicted RBP19.66■□□□□ 0.74
DDX28-201ENST00000332395 RPN1P04843 607 aaKnown RBP19.66■□□□□ 0.74
DDX28-201ENST00000332395 RRAGBQ5VZM2 374 aa19.66■□□□□ 0.74
DDX28-201ENST00000332395 NEK8Q86SG6 692 aa19.66■□□□□ 0.74
DDX28-201ENST00000332395 REXO1Q8N1G1 1221 aaKnown RBP19.66■□□□□ 0.74
DDX28-201ENST00000332395 C10orf71Q711Q0 1435 aa19.65■□□□□ 0.74
DDX28-201ENST00000332395 HLA-DOAP06340 250 aa19.65■□□□□ 0.74
DDX28-201ENST00000332395 OR52Z1P0C646 297 aa19.65■□□□□ 0.74
DDX28-201ENST00000332395 CRKP46108 304 aa19.65■□□□□ 0.74
DDX28-201ENST00000332395 NFIAQ12857 509 aa19.65■□□□□ 0.74
DDX28-201ENST00000332395 ZNF658Q5TYW1 1059 aaPredicted RBP19.65■□□□□ 0.74
DDX28-201ENST00000332395 KCNQ5Q9NR82 932 aa19.65■□□□□ 0.74
DDX28-201ENST00000332395 PPP4R3BQ5MIZ7 849 aa19.64■□□□□ 0.74
DDX28-201ENST00000332395 ZNF772Q68DY9 489 aaPredicted RBP19.64■□□□□ 0.74
DDX28-201ENST00000332395 C2CD5Q86YS7 1000 aa19.64■□□□□ 0.74
DDX28-201ENST00000332395 BIN2Q9UBW5 565 aaPredicted RBP19.64■□□□□ 0.74
DDX28-201ENST00000332395 TMEM139Q8IV31 216 aa19.64■□□□□ 0.73
DDX28-201ENST00000332395 TBCKQ8TEA7 893 aa19.64■□□□□ 0.73
DDX28-201ENST00000332395 AK8Q96MA6 479 aa19.64■□□□□ 0.73
DDX28-201ENST00000332395 GPCPD1Q9NPB8 672 aa19.64■□□□□ 0.73
DDX28-201ENST00000332395 CBX1P83916 185 aa19.63■□□□□ 0.73
DDX28-201ENST00000332395 ZNF543Q08ER8 600 aa19.63■□□□□ 0.73
DDX28-201ENST00000332395 JAKMIP3Q5VZ66 844 aa19.63■□□□□ 0.73
DDX28-201ENST00000332395 TC2NQ8N9U0 490 aa19.63■□□□□ 0.73
DDX28-201ENST00000332395 KIF18AQ8NI77 898 aa19.63■□□□□ 0.73
DDX28-201ENST00000332395 ZDHHC15Q96MV8 337 aa19.63■□□□□ 0.73
DDX28-201ENST00000332395 CTAGE1Q96RT6 745 aa19.63■□□□□ 0.73
DDX28-201ENST00000332395 GTPBP4Q9BZE4 634 aaKnown RBP19.63■□□□□ 0.73
DDX28-201ENST00000332395 RWDD2AQ9UIY3 292 aa19.63■□□□□ 0.73
DDX28-201ENST00000332395 GREB1LQ9C091 1923 aaPredicted RBP19.63■□□□□ 0.73
DDX28-201ENST00000332395 CCP110O43303 1012 aa19.63■□□□□ 0.73
DDX28-201ENST00000332395 PAK1Q13153 545 aa19.63■□□□□ 0.73
DDX28-201ENST00000332395 COA7Q96BR5 231 aa19.63■□□□□ 0.73
DDX28-201ENST00000332395 EHD4Q9H223 541 aa19.63■□□□□ 0.73
DDX28-201ENST00000332395 ADD3Q9UEY8 706 aaKnown RBP19.63■□□□□ 0.73
DDX28-201ENST00000332395 ZHX1Q9UKY1 873 aaPredicted RBP19.63■□□□□ 0.73
DDX28-201ENST00000332395 MPHOSPH10O00566 681 aaKnown RBP19.62■□□□□ 0.73
DDX28-201ENST00000332395 ARHGAP6O43182 974 aa19.62■□□□□ 0.73
DDX28-201ENST00000332395 TEX33O43247 280 aa19.62■□□□□ 0.73
DDX28-201ENST00000332395 KIAA0825Q8IV33 1275 aa19.62■□□□□ 0.73
DDX28-201ENST00000332395 PLIN2Q99541 437 aa19.62■□□□□ 0.73
DDX28-201ENST00000332395 TMEM260Q9NX78 707 aa19.62■□□□□ 0.73
DDX28-201ENST00000332395 H0YIN7 160 aa19.61■□□□□ 0.73
DDX28-201ENST00000332395 MYL1P05976 194 aa19.61■□□□□ 0.73
DDX28-201ENST00000332395 ADKP55263 362 aaKnown RBP19.61■□□□□ 0.73
DDX28-201ENST00000332395 ORC2Q13416 577 aaPredicted RBP19.61■□□□□ 0.73
DDX28-201ENST00000332395 STRIP1Q5VSL9 837 aa19.61■□□□□ 0.73
DDX28-201ENST00000332395 CABP7Q86V35 215 aa19.61■□□□□ 0.73
DDX28-201ENST00000332395 FCHSD1Q86WN1 690 aa19.61■□□□□ 0.73
DDX28-201ENST00000332395 ZFPM1Q8IX07 1006 aa19.61■□□□□ 0.73
DDX28-201ENST00000332395 BAG1Q99933 345 aaPredicted RBP19.61■□□□□ 0.73
DDX28-201ENST00000332395 KBTBD4Q9NVX7 518 aa19.61■□□□□ 0.73
DDX28-201ENST00000332395 GDAQ9Y2T3 454 aa19.61■□□□□ 0.73
DDX28-201ENST00000332395 COBLO75128 1261 aa19.61■□□□□ 0.73
DDX28-201ENST00000332395 ADCY7P51828 1080 aa19.61■□□□□ 0.73
DDX28-201ENST00000332395 STYK1Q6J9G0 422 aa19.61■□□□□ 0.73
DDX28-201ENST00000332395 LRRC15Q8TF66 581 aa19.61■□□□□ 0.73
DDX28-201ENST00000332395 NELFBQ8WX92 580 aa19.61■□□□□ 0.73
DDX28-201ENST00000332395 ANKRD7Q92527 254 aa19.61■□□□□ 0.73
DDX28-201ENST00000332395 JMJD4Q9H9V9 463 aa19.61■□□□□ 0.73
DDX28-201ENST00000332395 MYH4Q9Y623 1939 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 SLURP2P0DP57 97 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 PRCPP42785 496 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 KCNB1Q14721 858 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 FILIP1LQ4L180 1135 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 ADGRF4Q8IZF3 695 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 PDCL2Q8N4E4 241 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 MRIQ9BWK5 157 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 CUEDC2Q9H467 287 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 DNAJC18Q9H819 358 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 PCDHAC2Q9Y5I4 1007 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 SCN9AQ15858 1988 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 PNMA6FA0A0J9YX94 578 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 ECE2O60344 883 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 STX10O60499 249 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 PLCG1P19174 1290 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 PBX1P40424 430 aa19.6■□□□□ 0.73
DDX28-201ENST00000332395 CACNB3P54284 484 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms