RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 SOS2Q07890 1332 aaPredicted RBP16.15■□□□□ 0.18
SNX20-202ENST00000330943 SHTN1A0MZ66 631 aa16.15■□□□□ 0.18
SNX20-202ENST00000330943 EEF1GP26641 437 aaKnown RBP16.15■□□□□ 0.18
SNX20-202ENST00000330943 KLK7P49862 253 aa16.15■□□□□ 0.18
SNX20-202ENST00000330943 HDAC7Q8WUI4 952 aa16.15■□□□□ 0.18
SNX20-202ENST00000330943 PCMTD1Q96MG8 357 aaPredicted RBP16.15■□□□□ 0.18
SNX20-202ENST00000330943 ZSCAN10Q96SZ4 725 aaPredicted RBP16.15■□□□□ 0.18
SNX20-202ENST00000330943 LRP2BPQ9P2M1 347 aa16.15■□□□□ 0.18
SNX20-202ENST00000330943 BAZ2BQ9UIF8 2168 aaKnown RBP16.15■□□□□ 0.18
SNX20-202ENST00000330943 DISP2A7MBM2 1401 aa16.15■□□□□ 0.18
SNX20-202ENST00000330943 KCNQ4P56696 695 aa16.15■□□□□ 0.18
SNX20-202ENST00000330943 SMIM5Q71RC9 77 aa16.15■□□□□ 0.18
SNX20-202ENST00000330943 SUGP1Q8IWZ8 645 aaKnown RBP16.15■□□□□ 0.18
SNX20-202ENST00000330943 RASSF8Q8NHQ8 419 aa16.15■□□□□ 0.18
SNX20-202ENST00000330943 SMCR8Q8TEV9 937 aaPredicted RBP16.15■□□□□ 0.18
SNX20-202ENST00000330943 SECISBP2LQ93073 1101 aaKnown RBP16.15■□□□□ 0.18
SNX20-202ENST00000330943 ACSBG1Q96GR2 724 aa16.15■□□□□ 0.18
SNX20-202ENST00000330943 DOCK2Q92608 1830 aa16.14■□□□□ 0.17
SNX20-202ENST00000330943 PAPPAQ13219 1627 aa16.14■□□□□ 0.17
SNX20-202ENST00000330943 TNS2Q63HR2 1409 aa16.14■□□□□ 0.17
SNX20-202ENST00000330943 MATR3P43243 847 aaKnown RBP eCLIP16.14■□□□□ 0.17
SNX20-202ENST00000330943 DNM2P50570 870 aa16.14■□□□□ 0.17
SNX20-202ENST00000330943 NLRP5P59047 1200 aa16.14■□□□□ 0.17
SNX20-202ENST00000330943 KIF5AQ12840 1032 aa16.14■□□□□ 0.17
SNX20-202ENST00000330943 ZNF662Q6ZS27 426 aa16.14■□□□□ 0.17
SNX20-202ENST00000330943 AMOTL1Q8IY63 956 aa16.14■□□□□ 0.17
SNX20-202ENST00000330943 LRRC1Q9BTT6 524 aa16.14■□□□□ 0.17
SNX20-202ENST00000330943 DMGDHQ9UI17 866 aaKnown RBP16.14■□□□□ 0.17
SNX20-202ENST00000330943 GRIN2DO15399 1336 aa16.14■□□□□ 0.17
SNX20-202ENST00000330943 NUTM2BA6NNL0 878 aaPredicted RBP16.14■□□□□ 0.17
SNX20-202ENST00000330943 NUTM2EB1AL46 878 aaPredicted RBP16.14■□□□□ 0.17
SNX20-202ENST00000330943 EIF3HO15372 352 aaKnown RBP eCLIP16.14■□□□□ 0.17
SNX20-202ENST00000330943 ANKRD18AQ8IVF6 992 aa16.14■□□□□ 0.17
SNX20-202ENST00000330943 PIGBQ92521 554 aa16.14■□□□□ 0.17
SNX20-202ENST00000330943 GEMIN8Q9NWZ8 242 aaKnown RBP16.14■□□□□ 0.17
SNX20-202ENST00000330943 TMOD3Q9NYL9 352 aa16.14■□□□□ 0.17
SNX20-202ENST00000330943 MROH5Q6ZUA9 1318 aa16.14■□□□□ 0.17
SNX20-202ENST00000330943 MYH3P11055 1940 aa16.13■□□□□ 0.17
SNX20-202ENST00000330943 ADAMTS3O15072 1205 aa16.13■□□□□ 0.17
SNX20-202ENST00000330943 PDE8AO60658 829 aa16.13■□□□□ 0.17
SNX20-202ENST00000330943 SLC7A5Q01650 507 aa16.13■□□□□ 0.17
SNX20-202ENST00000330943 THAP9Q9H5L6 903 aa16.13■□□□□ 0.17
SNX20-202ENST00000330943 EXOC1Q9NV70 894 aa16.13■□□□□ 0.17
SNX20-202ENST00000330943 RBM28Q9NW13 759 aaKnown RBP16.13■□□□□ 0.17
SNX20-202ENST00000330943 SAMM50Q9Y512 469 aa16.13■□□□□ 0.17
SNX20-202ENST00000330943 CYP2D7A0A087X1C5 515 aa16.13■□□□□ 0.17
SNX20-202ENST00000330943 SRGNP10124 158 aa16.13■□□□□ 0.17
SNX20-202ENST00000330943 BCAMP50895 628 aa16.13■□□□□ 0.17
SNX20-202ENST00000330943 CCDC96Q2M329 555 aa16.13■□□□□ 0.17
SNX20-202ENST00000330943 MCTP2Q6DN12 878 aa16.13■□□□□ 0.17
SNX20-202ENST00000330943 TUBGCP2Q9BSJ2 902 aa16.13■□□□□ 0.17
SNX20-202ENST00000330943 TTYH3Q9C0H2 523 aa16.13■□□□□ 0.17
SNX20-202ENST00000330943 LRWD1Q9UFC0 647 aa16.13■□□□□ 0.17
SNX20-202ENST00000330943 SNX12Q9UMY4 172 aa16.13■□□□□ 0.17
SNX20-202ENST00000330943 GOLGA8KD6RF30 607 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 PSMA7O14818 248 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 CYP7A1P22680 504 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 FBXW10Q5XX13 1052 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 GBP6Q6ZN66 633 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 KRT26Q7Z3Y9 468 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 CREG2Q8IUH2 290 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 CCDC170Q8IYT3 715 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 FNBP4Q8N3X1 1017 aaPredicted RBP16.12■□□□□ 0.17
SNX20-202ENST00000330943 PURBQ96QR8 312 aaKnown RBP16.12■□□□□ 0.17
SNX20-202ENST00000330943 PSMB7Q99436 277 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 PLIN2Q99541 437 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 TBC1D8BQ0IIM8 1120 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 TROAPQ12815 778 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 TMTC3Q6ZXV5 915 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 ADGRA1Q86SQ6 560 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 RUFY1Q96T51 708 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 IQSEC3Q9UPP2 1182 aaPredicted RBP16.12■□□□□ 0.17
SNX20-202ENST00000330943 CAPN6Q9Y6Q1 641 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 CNTNAP5Q8WYK1 1306 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 BCORQ6W2J9 1755 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 RASSF10A6NK89 507 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 VAV2P52735 878 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 ZBED6P86452 979 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 FKBP15Q5T1M5 1219 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 MMGT1Q8N4V1 131 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 CSGALNACT2Q8N6G5 542 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 NCAPGQ9BPX3 1015 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 DISC1Q9NRI5 854 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 SMARCAL1Q9NZC9 954 aa16.12■□□□□ 0.17
SNX20-202ENST00000330943 SRCAPQ6ZRS2 3230 aa16.11■□□□□ 0.17
SNX20-202ENST00000330943 PP2D1A8MPX8 630 aa16.11■□□□□ 0.17
SNX20-202ENST00000330943 OPA1O60313 960 aa16.11■□□□□ 0.17
SNX20-202ENST00000330943 INPP5BP32019 993 aa16.11■□□□□ 0.17
SNX20-202ENST00000330943 LONP1P36776 959 aaKnown RBP16.11■□□□□ 0.17
SNX20-202ENST00000330943 SPA17Q15506 151 aa16.11■□□□□ 0.17
SNX20-202ENST00000330943 IQCA1Q86XH1 822 aa16.11■□□□□ 0.17
SNX20-202ENST00000330943 SRBD1Q8N5C6 995 aaKnown RBP16.11■□□□□ 0.17
SNX20-202ENST00000330943 ZNF263O14978 683 aa16.11■□□□□ 0.17
SNX20-202ENST00000330943 PLEKP08567 350 aaPredicted RBP16.11■□□□□ 0.17
SNX20-202ENST00000330943 VEGFAP15692 232 aaPredicted RBP16.11■□□□□ 0.17
SNX20-202ENST00000330943 TRAPPC10P48553 1259 aa16.11■□□□□ 0.17
SNX20-202ENST00000330943 NKX1-1Q15270 411 aaPredicted RBP16.11■□□□□ 0.17
SNX20-202ENST00000330943 TSEN2Q8NCE0 465 aaKnown RBP16.11■□□□□ 0.17
SNX20-202ENST00000330943 SPATA4Q8NEY3 305 aa16.11■□□□□ 0.17
SNX20-202ENST00000330943 TRIM58Q8NG06 486 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms