RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 NEK9Q8TD19 979 aa18.03■□□□□ 0.48
CTHRC1-201ENST00000330295 UPF3BQ9BZI7 483 aaKnown RBP18.03■□□□□ 0.48
CTHRC1-201ENST00000330295 SALL2Q9Y467 1007 aaPredicted RBP18.03■□□□□ 0.48
CTHRC1-201ENST00000330295 TRIOO75962 3097 aa18.02■□□□□ 0.48
CTHRC1-201ENST00000330295 PTPRCP08575 1304 aa18.02■□□□□ 0.48
CTHRC1-201ENST00000330295 UBTFL1P0CB47 393 aaPredicted RBP18.02■□□□□ 0.48
CTHRC1-201ENST00000330295 ABHD16BQ9H3Z7 469 aa18.02■□□□□ 0.48
CTHRC1-201ENST00000330295 SUGCTQ9HAC7 445 aa18.02■□□□□ 0.48
CTHRC1-201ENST00000330295 FAM86C1Q9NVL1 165 aa18.02■□□□□ 0.48
CTHRC1-201ENST00000330295 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.02■□□□□ 0.48
CTHRC1-201ENST00000330295 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.02■□□□□ 0.48
CTHRC1-201ENST00000330295 LCHNA4D1U4 455 aa18.01■□□□□ 0.47
CTHRC1-201ENST00000330295 H3BQ06 376 aaPredicted RBP18.01■□□□□ 0.47
CTHRC1-201ENST00000330295 MPHOSPH10O00566 681 aaKnown RBP18.01■□□□□ 0.47
CTHRC1-201ENST00000330295 IRS1P35568 1242 aa18.01■□□□□ 0.47
CTHRC1-201ENST00000330295 USP5P45974 858 aa18.01■□□□□ 0.47
CTHRC1-201ENST00000330295 BMP8AQ7Z5Y6 402 aa18.01■□□□□ 0.47
CTHRC1-201ENST00000330295 ZNF467Q7Z7K2 595 aaPredicted RBP18.01■□□□□ 0.47
CTHRC1-201ENST00000330295 ZNF214Q9UL59 606 aaPredicted RBP18.01■□□□□ 0.47
CTHRC1-201ENST00000330295 FAM50BQ9Y247 325 aa18.01■□□□□ 0.47
CTHRC1-201ENST00000330295 PTPRSQ13332 1948 aa18.01■□□□□ 0.47
CTHRC1-201ENST00000330295 DNAJC25-GNG10A0A024R161 153 aa18■□□□□ 0.47
CTHRC1-201ENST00000330295 WDR46O15213 610 aaKnown RBP18■□□□□ 0.47
CTHRC1-201ENST00000330295 UQCRFS1P1P0C7P4 283 aa18■□□□□ 0.47
CTHRC1-201ENST00000330295 ADHFE1Q8IWW8 467 aa18■□□□□ 0.47
CTHRC1-201ENST00000330295 MRPL50Q8N5N7 158 aaKnown RBP18■□□□□ 0.47
CTHRC1-201ENST00000330295 DDX11Q96FC9 970 aa18■□□□□ 0.47
CTHRC1-201ENST00000330295 SNRKQ9NRH2 765 aa18■□□□□ 0.47
CTHRC1-201ENST00000330295 MTUS1Q9ULD2 1270 aa18■□□□□ 0.47
CTHRC1-201ENST00000330295 MYO5AQ9Y4I1 1855 aaKnown RBP18■□□□□ 0.47
CTHRC1-201ENST00000330295 ASTN1O14525 1302 aa17.99■□□□□ 0.47
CTHRC1-201ENST00000330295 VWA5AO00534 786 aa17.99■□□□□ 0.47
CTHRC1-201ENST00000330295 RFC2P35250 354 aa17.99■□□□□ 0.47
CTHRC1-201ENST00000330295 PLCD1P51178 756 aa17.99■□□□□ 0.47
CTHRC1-201ENST00000330295 PKN1Q16512 942 aa17.99■□□□□ 0.47
CTHRC1-201ENST00000330295 HERC4Q5GLZ8 1057 aaPredicted RBP17.99■□□□□ 0.47
CTHRC1-201ENST00000330295 DIEXFQ68CQ4 756 aaKnown RBP17.99■□□□□ 0.47
CTHRC1-201ENST00000330295 ALDH8A1Q9H2A2 487 aaPredicted RBP17.99■□□□□ 0.47
CTHRC1-201ENST00000330295 FBXO28Q9NVF7 368 aa17.99■□□□□ 0.47
CTHRC1-201ENST00000330295 MUTYHQ9UIF7 546 aa17.99■□□□□ 0.47
CTHRC1-201ENST00000330295 RIF1Q5UIP0 2472 aaKnown RBP17.99■□□□□ 0.47
CTHRC1-201ENST00000330295 CYP2C9P11712 490 aa17.98■□□□□ 0.47
CTHRC1-201ENST00000330295 PSMC6P62333 389 aa17.98■□□□□ 0.47
CTHRC1-201ENST00000330295 MAGEB6Q8N7X4 407 aa17.98■□□□□ 0.47
CTHRC1-201ENST00000330295 VCPKMTQ9H867 229 aa17.98■□□□□ 0.47
CTHRC1-201ENST00000330295 TMX2Q9Y320 296 aa17.98■□□□□ 0.47
CTHRC1-201ENST00000330295 DCHS1Q96JQ0 3298 aa17.98■□□□□ 0.47
CTHRC1-201ENST00000330295 SIP14410 1827 aa17.98■□□□□ 0.47
CTHRC1-201ENST00000330295 FAM186AA6NE01 2351 aa17.97■□□□□ 0.47
CTHRC1-201ENST00000330295 KMT2EQ8IZD2 1858 aa17.97■□□□□ 0.47
CTHRC1-201ENST00000330295 ERVK-21P61565 698 aa17.97■□□□□ 0.47
CTHRC1-201ENST00000330295 GABPAQ06546 454 aa17.97■□□□□ 0.47
CTHRC1-201ENST00000330295 FSCN1Q16658 493 aaKnown RBP17.97■□□□□ 0.47
CTHRC1-201ENST00000330295 ARMCX2Q7L311 632 aa17.97■□□□□ 0.47
CTHRC1-201ENST00000330295 CERS3Q8IU89 383 aa17.97■□□□□ 0.47
CTHRC1-201ENST00000330295 REPS2Q8NFH8 660 aa17.97■□□□□ 0.47
CTHRC1-201ENST00000330295 TET1Q8NFU7 2136 aa17.97■□□□□ 0.47
CTHRC1-201ENST00000330295 FTOQ9C0B1 505 aaKnown RBP eCLIP17.97■□□□□ 0.47
CTHRC1-201ENST00000330295 KATNBL1Q9H079 304 aa17.97■□□□□ 0.47
CTHRC1-201ENST00000330295 ARHGEF10LQ9HCE6 1279 aa17.97■□□□□ 0.47
CTHRC1-201ENST00000330295 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.96■□□□□ 0.47
CTHRC1-201ENST00000330295 BAIAP3O94812 1187 aa17.96■□□□□ 0.47
CTHRC1-201ENST00000330295 CYP2E1P05181 493 aaPredicted RBP17.96■□□□□ 0.47
CTHRC1-201ENST00000330295 SUPT20HL2P0C7V6 817 aa17.96■□□□□ 0.47
CTHRC1-201ENST00000330295 KCNJ6P48051 423 aa17.96■□□□□ 0.47
CTHRC1-201ENST00000330295 TNFAIP2Q03169 654 aa17.96■□□□□ 0.47
CTHRC1-201ENST00000330295 TMEM179Q6ZVK1 233 aa17.96■□□□□ 0.47
CTHRC1-201ENST00000330295 NOL8Q76FK4 1167 aaKnown RBP17.96■□□□□ 0.47
CTHRC1-201ENST00000330295 TLK2Q86UE8 772 aa17.96■□□□□ 0.47
CTHRC1-201ENST00000330295 SUGP1Q8IWZ8 645 aaKnown RBP17.96■□□□□ 0.47
CTHRC1-201ENST00000330295 EDAQ92838 391 aa17.96■□□□□ 0.47
CTHRC1-201ENST00000330295 PBXIP1Q96AQ6 731 aa17.96■□□□□ 0.47
CTHRC1-201ENST00000330295 TGS1Q96RS0 853 aaKnown RBP17.96■□□□□ 0.47
CTHRC1-201ENST00000330295 SH2D4AQ9H788 454 aa17.96■□□□□ 0.47
CTHRC1-201ENST00000330295 TRMT13Q9NUP7 481 aaKnown RBP17.96■□□□□ 0.47
CTHRC1-201ENST00000330295 PPP1R9AQ9ULJ8 1098 aa17.96■□□□□ 0.47
CTHRC1-201ENST00000330295 TANC1Q9C0D5 1861 aa17.96■□□□□ 0.47
CTHRC1-201ENST00000330295 MYO15AQ9UKN7 3530 aa17.95■□□□□ 0.46
CTHRC1-201ENST00000330295 CACNA1GO43497 2377 aa17.95■□□□□ 0.46
CTHRC1-201ENST00000330295 PLXNA3P51805 1871 aa17.95■□□□□ 0.46
CTHRC1-201ENST00000330295 ZEB2O60315 1214 aa17.95■□□□□ 0.46
CTHRC1-201ENST00000330295 IGSF3O75054 1194 aa17.95■□□□□ 0.46
CTHRC1-201ENST00000330295 CYP7A1P22680 504 aa17.95■□□□□ 0.46
CTHRC1-201ENST00000330295 CLEC10AQ8IUN9 316 aa17.95■□□□□ 0.46
CTHRC1-201ENST00000330295 SIAH1Q8IUQ4 282 aa17.95■□□□□ 0.46
CTHRC1-201ENST00000330295 MIGA1Q8NAN2 632 aa17.95■□□□□ 0.46
CTHRC1-201ENST00000330295 FGD4Q96M96 766 aa17.95■□□□□ 0.46
CTHRC1-201ENST00000330295 ZBED2Q9BTP6 218 aa17.95■□□□□ 0.46
CTHRC1-201ENST00000330295 TEX13BQ9BXU2 312 aa17.95■□□□□ 0.46
CTHRC1-201ENST00000330295 IRF2BPLQ9H1B7 796 aa17.95■□□□□ 0.46
CTHRC1-201ENST00000330295 ALG13Q9NP73 1137 aaKnown RBP17.95■□□□□ 0.46
CTHRC1-201ENST00000330295 GNEQ9Y223 722 aaKnown RBP17.95■□□□□ 0.46
CTHRC1-201ENST00000330295 TNKSO95271 1327 aa17.95■□□□□ 0.46
CTHRC1-201ENST00000330295 TMEM221A6NGB7 291 aa17.94■□□□□ 0.46
CTHRC1-201ENST00000330295 M0R296 226 aa17.94■□□□□ 0.46
CTHRC1-201ENST00000330295 ATOH1Q92858 354 aaPredicted RBP17.94■□□□□ 0.46
CTHRC1-201ENST00000330295 AP5M1Q9H0R1 490 aa17.94■□□□□ 0.46
CTHRC1-201ENST00000330295 POLR3DP05423 398 aaPredicted RBP17.93■□□□□ 0.46
CTHRC1-201ENST00000330295 IQCF3P0C7M6 154 aa17.93■□□□□ 0.46
CTHRC1-201ENST00000330295 ID4P47928 161 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms