RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 MDM2Q00987 491 aaPredicted RBP17.35■□□□□ 0.37
TSPO-201ENST00000329563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.35■□□□□ 0.371e-8■■■■□ 26
TSPO-201ENST00000329563 DEFB123Q8N688 67 aa17.35■□□□□ 0.37
TSPO-201ENST00000329563 LENG1Q96BZ8 264 aaPredicted RBP17.35■□□□□ 0.37
TSPO-201ENST00000329563 CTDP1Q9Y5B0 961 aaPredicted RBP17.35■□□□□ 0.37
TSPO-201ENST00000329563 SNAI1O95863 264 aaPredicted RBP17.34■□□□□ 0.37
TSPO-201ENST00000329563 MYCNP04198 464 aaPredicted RBP17.34■□□□□ 0.37
TSPO-201ENST00000329563 RARBP10826 455 aa17.34■□□□□ 0.37
TSPO-201ENST00000329563 SLC1A4P43007 532 aa17.34■□□□□ 0.37
TSPO-201ENST00000329563 RTP1P59025 263 aa17.34■□□□□ 0.37
TSPO-201ENST00000329563 RRP12Q5JTH9 1297 aaKnown RBP17.34■□□□□ 0.37
TSPO-201ENST00000329563 RCSD1Q6JBY9 416 aa17.34■□□□□ 0.37
TSPO-201ENST00000329563 CWC27Q6UX04 472 aaKnown RBP17.34■□□□□ 0.37
TSPO-201ENST00000329563 SLC17A8Q8NDX2 589 aa17.34■□□□□ 0.37
TSPO-201ENST00000329563 STAG1Q8WVM7 1258 aa17.34■□□□□ 0.37
TSPO-201ENST00000329563 AGBL1Q96MI9 1066 aa17.34■□□□□ 0.37
TSPO-201ENST00000329563 LTBP2Q14767 1821 aa17.33■□□□□ 0.37
TSPO-201ENST00000329563 NEDD4P46934 1319 aa17.33■□□□□ 0.36
TSPO-201ENST00000329563 STAT2P52630 851 aa17.33■□□□□ 0.36
TSPO-201ENST00000329563 OAZ1P54368 228 aa17.33■□□□□ 0.36
TSPO-201ENST00000329563 MTMR7Q9Y216 660 aa17.33■□□□□ 0.36
TSPO-201ENST00000329563 CNPY2Q9Y2B0 182 aa17.33■□□□□ 0.36
TSPO-201ENST00000329563 ATP11BQ9Y2G3 1177 aa17.33■□□□□ 0.36
TSPO-201ENST00000329563 LCTP09848 1927 aa17.33■□□□□ 0.36
TSPO-201ENST00000329563 RAD50Q92878 1312 aa17.32■□□□□ 0.36
TSPO-201ENST00000329563 PLA2G6O60733 806 aa17.32■□□□□ 0.36
TSPO-201ENST00000329563 MFAP1P55081 439 aaKnown RBP17.32■□□□□ 0.36
TSPO-201ENST00000329563 LRRC41Q15345 812 aa17.32■□□□□ 0.36
TSPO-201ENST00000329563 TTBK2Q6IQ55 1244 aa17.32■□□□□ 0.36
TSPO-201ENST00000329563 MAMDC4Q6UXC1 1216 aa17.32■□□□□ 0.36
TSPO-201ENST00000329563 SLC39A5Q6ZMH5 540 aa17.32■□□□□ 0.36
TSPO-201ENST00000329563 RNF180Q86T96 592 aa17.32■□□□□ 0.36
TSPO-201ENST00000329563 MSL3Q8N5Y2 521 aaKnown RBP17.32■□□□□ 0.36
TSPO-201ENST00000329563 DDX11Q96FC9 970 aa17.32■□□□□ 0.36
TSPO-201ENST00000329563 TMEM47Q9BQJ4 181 aa17.32■□□□□ 0.36
TSPO-201ENST00000329563 XPNPEP3Q9NQH7 507 aa17.32■□□□□ 0.36
TSPO-201ENST00000329563 TOMM22Q9NS69 142 aa17.32■□□□□ 0.36
TSPO-201ENST00000329563 HOMER2Q9NSB8 354 aa17.32■□□□□ 0.36
TSPO-201ENST00000329563 TCP11L1Q9NUJ3 509 aa17.32■□□□□ 0.36
TSPO-201ENST00000329563 PRR12Q9ULL5 1215 aa17.32■□□□□ 0.36
TSPO-201ENST00000329563 ISY1Q9ULR0 285 aaKnown RBP17.32■□□□□ 0.36
TSPO-201ENST00000329563 A0A0C4DFX4 3053 aa17.31■□□□□ 0.36
TSPO-201ENST00000329563 LRRC37A2A6NM11 1700 aa17.31■□□□□ 0.36
TSPO-201ENST00000329563 ADCY6O43306 1168 aa17.31■□□□□ 0.36
TSPO-201ENST00000329563 C8orf34Q49A92 452 aa17.31■□□□□ 0.36
TSPO-201ENST00000329563 AKNAD1Q5T1N1 836 aa17.31■□□□□ 0.36
TSPO-201ENST00000329563 C1orf53Q5VUE5 145 aa17.31■□□□□ 0.36
TSPO-201ENST00000329563 FAM160B2Q86V87 743 aa17.31■□□□□ 0.36
TSPO-201ENST00000329563 CHST13Q8NET6 341 aa17.31■□□□□ 0.36
TSPO-201ENST00000329563 DDX49Q9Y6V7 483 aaKnown RBP17.31■□□□□ 0.36
TSPO-201ENST00000329563 LAMA2P24043 3122 aaKnown RBP17.31■□□□□ 0.36
TSPO-201ENST00000329563 ASTN1O14525 1302 aa17.3■□□□□ 0.36
TSPO-201ENST00000329563 MCM3APO60318 1980 aa17.3■□□□□ 0.36
TSPO-201ENST00000329563 PGK1P00558 417 aa17.3■□□□□ 0.36
TSPO-201ENST00000329563 AKR1A1P14550 325 aa17.3■□□□□ 0.36
TSPO-201ENST00000329563 SLC16A2P36021 539 aa17.3■□□□□ 0.36
TSPO-201ENST00000329563 IRX5P78411 483 aaPredicted RBP17.3■□□□□ 0.36
TSPO-201ENST00000329563 CNTN2Q02246 1040 aa17.3■□□□□ 0.36
TSPO-201ENST00000329563 SNX17Q15036 470 aa17.3■□□□□ 0.36
TSPO-201ENST00000329563 MUM1L1Q5H9M0 696 aa17.3■□□□□ 0.36
TSPO-201ENST00000329563 PPP4R3BQ5MIZ7 849 aa17.3■□□□□ 0.36
TSPO-201ENST00000329563 CCDC174Q6PII3 467 aa17.3■□□□□ 0.36
TSPO-201ENST00000329563 ANKRD35Q8N283 1001 aa17.3■□□□□ 0.36
TSPO-201ENST00000329563 CHURC1Q8WUH1 139 aa17.3■□□□□ 0.36
TSPO-201ENST00000329563 PRDM5Q9NQX1 630 aaPredicted RBP17.3■□□□□ 0.36
TSPO-201ENST00000329563 STXBP5LQ9Y2K9 1186 aa17.3■□□□□ 0.36
TSPO-201ENST00000329563 FRMPD2Q68DX3 1309 aaPredicted RBP17.29■□□□□ 0.36
TSPO-201ENST00000329563 SYNGAP1Q96PV0 1343 aa17.29■□□□□ 0.36
TSPO-201ENST00000329563 ADAMTS4O75173 837 aa17.29■□□□□ 0.36
TSPO-201ENST00000329563 REC8O95072 547 aa17.29■□□□□ 0.36
TSPO-201ENST00000329563 TOP1P11387 765 aaKnown RBP17.29■□□□□ 0.36
TSPO-201ENST00000329563 ADCYAP1R1P41586 468 aa17.29■□□□□ 0.36
TSPO-201ENST00000329563 IKQ13123 557 aaPredicted RBP17.29■□□□□ 0.36
TSPO-201ENST00000329563 MFSD6Q6ZSS7 791 aa17.29■□□□□ 0.36
TSPO-201ENST00000329563 ZNF467Q7Z7K2 595 aaPredicted RBP17.29■□□□□ 0.36
TSPO-201ENST00000329563 FAM133AQ8N9E0 248 aa17.29■□□□□ 0.36
TSPO-201ENST00000329563 FERMT2Q96AC1 680 aa17.29■□□□□ 0.36
TSPO-201ENST00000329563 ZKSCAN3Q9BRR0 538 aa17.29■□□□□ 0.36
TSPO-201ENST00000329563 ESYT1Q9BSJ8 1104 aa17.29■□□□□ 0.36
TSPO-201ENST00000329563 BACH2Q9BYV9 841 aa17.29■□□□□ 0.36
TSPO-201ENST00000329563 KATNBL1Q9H079 304 aa17.29■□□□□ 0.36
TSPO-201ENST00000329563 A1CFQ9NQ94 594 aaKnown RBP17.29■□□□□ 0.36
TSPO-201ENST00000329563 RNF146Q9NTX7 359 aa17.29■□□□□ 0.36
TSPO-201ENST00000329563 FBXO40Q9UH90 709 aa17.29■□□□□ 0.36
TSPO-201ENST00000329563 PHF24Q9UPV7 400 aa17.29■□□□□ 0.36
TSPO-201ENST00000329563 SOWAHBA6NEL2 793 aa17.28■□□□□ 0.36
TSPO-201ENST00000329563 SGSM2O43147 1006 aa17.28■□□□□ 0.36
TSPO-201ENST00000329563 EPB41L2O43491 1005 aaKnown RBP17.28■□□□□ 0.36
TSPO-201ENST00000329563 FDX1P10109 184 aa17.28■□□□□ 0.36
TSPO-201ENST00000329563 PDHBP11177 359 aa17.28■□□□□ 0.36
TSPO-201ENST00000329563 CCDC96Q2M329 555 aa17.28■□□□□ 0.36
TSPO-201ENST00000329563 TRIM60Q495X7 471 aa17.28■□□□□ 0.36
TSPO-201ENST00000329563 FAM109BQ6ICB4 259 aaPredicted RBP17.28■□□□□ 0.36
TSPO-201ENST00000329563 BTNL9Q6UXG8 535 aa17.28■□□□□ 0.36
TSPO-201ENST00000329563 KIAA1211Q6ZU35 1233 aa17.28■□□□□ 0.36
TSPO-201ENST00000329563 DCAF4Q8WV16 495 aa17.28■□□□□ 0.36
TSPO-201ENST00000329563 TRERF1Q96PN7 1200 aa17.28■□□□□ 0.36
TSPO-201ENST00000329563 RANBP17Q9H2T7 1088 aaKnown RBP17.28■□□□□ 0.36
TSPO-201ENST00000329563 ACAD9Q9H845 621 aa17.28■□□□□ 0.36
TSPO-201ENST00000329563 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms