RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 ZBTB12Q9Y330 459 aaPredicted RBP18.02■□□□□ 0.48
PGBD2-201ENST00000329291 PSME4Q14997 1843 aa18.02■□□□□ 0.48
PGBD2-201ENST00000329291 USP17L10C9JJH3 530 aa18.02■□□□□ 0.47
PGBD2-201ENST00000329291 EDIL3O43854 480 aa18.02■□□□□ 0.47
PGBD2-201ENST00000329291 GDF11O95390 407 aa18.02■□□□□ 0.47
PGBD2-201ENST00000329291 DPYDQ12882 1025 aa18.02■□□□□ 0.47
PGBD2-201ENST00000329291 PDXDC2PQ6P474 469 aa18.02■□□□□ 0.47
PGBD2-201ENST00000329291 FAM177A1Q8N128 213 aaPredicted RBP18.02■□□□□ 0.47
PGBD2-201ENST00000329291 CCDC12Q8WUD4 166 aaPredicted RBP18.02■□□□□ 0.47
PGBD2-201ENST00000329291 GMLQ99445 158 aa18.02■□□□□ 0.47
PGBD2-201ENST00000329291 PPP1R1BQ9UD71 204 aaPredicted RBP18.02■□□□□ 0.47
PGBD2-201ENST00000329291 ZNRF3Q9ULT6 936 aa18.02■□□□□ 0.47
PGBD2-201ENST00000329291 MYH8P13535 1937 aa18.01■□□□□ 0.47
PGBD2-201ENST00000329291 GREB1LQ9C091 1923 aaPredicted RBP18.01■□□□□ 0.47
PGBD2-201ENST00000329291 GNA11P29992 359 aa18.01■□□□□ 0.47
PGBD2-201ENST00000329291 LONP1P36776 959 aaKnown RBP18.01■□□□□ 0.47
PGBD2-201ENST00000329291 R3HDM1Q15032 1099 aaKnown RBP18.01■□□□□ 0.47
PGBD2-201ENST00000329291 PPP4R3BQ5MIZ7 849 aa18.01■□□□□ 0.47
PGBD2-201ENST00000329291 KRT25Q7Z3Z0 450 aa18.01■□□□□ 0.47
PGBD2-201ENST00000329291 OGFOD1Q8N543 542 aa18.01■□□□□ 0.47
PGBD2-201ENST00000329291 DPF2Q92785 391 aa18.01■□□□□ 0.47
PGBD2-201ENST00000329291 ENTPD3O75355 529 aa18.01■□□□□ 0.47
PGBD2-201ENST00000329291 FANCCQ00597 558 aa18.01■□□□□ 0.47
PGBD2-201ENST00000329291 NONOQ15233 471 aaKnown RBP eCLIP18.01■□□□□ 0.47
PGBD2-201ENST00000329291 CCDC96Q2M329 555 aa18.01■□□□□ 0.47
PGBD2-201ENST00000329291 LETM2Q2VYF4 491 aa18.01■□□□□ 0.47
PGBD2-201ENST00000329291 FILIP1Q7Z7B0 1213 aa18.01■□□□□ 0.47
PGBD2-201ENST00000329291 TBCKQ8TEA7 893 aa18.01■□□□□ 0.47
PGBD2-201ENST00000329291 MKL1Q969V6 931 aa18.01■□□□□ 0.47
PGBD2-201ENST00000329291 BLZF1Q9H2G9 400 aa18.01■□□□□ 0.47
PGBD2-201ENST00000329291 TMOD2Q9NZR1 351 aa18.01■□□□□ 0.47
PGBD2-201ENST00000329291 PNMA6FA0A0J9YX94 578 aa18■□□□□ 0.47
PGBD2-201ENST00000329291 CLRN2A0PK11 232 aa18■□□□□ 0.47
PGBD2-201ENST00000329291 CCNT1O60563 726 aaKnown RBP18■□□□□ 0.47
PGBD2-201ENST00000329291 SMC2O95347 1197 aa18■□□□□ 0.47
PGBD2-201ENST00000329291 CD44P16070 742 aaKnown RBP18■□□□□ 0.47
PGBD2-201ENST00000329291 KARSQ15046 597 aaKnown RBP18■□□□□ 0.47
PGBD2-201ENST00000329291 HSP90AA4PQ58FG1 418 aa18■□□□□ 0.47
PGBD2-201ENST00000329291 DTHD1Q6ZMT9 781 aa18■□□□□ 0.47
PGBD2-201ENST00000329291 TRMT44Q8IYL2 757 aaKnown RBP18■□□□□ 0.47
PGBD2-201ENST00000329291 ESYT2A0FGR8 921 aa17.99■□□□□ 0.47
PGBD2-201ENST00000329291 TCP10L2B9ZVM9 353 aa17.99■□□□□ 0.47
PGBD2-201ENST00000329291 RAD21O60216 631 aa17.99■□□□□ 0.47
PGBD2-201ENST00000329291 REXO1Q8N1G1 1221 aaKnown RBP17.99■□□□□ 0.47
PGBD2-201ENST00000329291 IQUBQ8NA54 791 aa17.99■□□□□ 0.47
PGBD2-201ENST00000329291 MLKLQ8NB16 471 aa17.99■□□□□ 0.47
PGBD2-201ENST00000329291 LRRC15Q8TF66 581 aa17.99■□□□□ 0.47
PGBD2-201ENST00000329291 TAOK3Q9H2K8 898 aa17.99■□□□□ 0.47
PGBD2-201ENST00000329291 KANSL2Q9H9L4 492 aa17.99■□□□□ 0.47
PGBD2-201ENST00000329291 SPTLC3Q9NUV7 552 aa17.99■□□□□ 0.47
PGBD2-201ENST00000329291 NYAP2Q9P242 653 aa17.99■□□□□ 0.47
PGBD2-201ENST00000329291 SPDYE2BA6NHP3 402 aa17.99■□□□□ 0.47
PGBD2-201ENST00000329291 SPDYE6P0CI01 402 aa17.99■□□□□ 0.47
PGBD2-201ENST00000329291 DLGAP5Q15398 846 aa17.99■□□□□ 0.47
PGBD2-201ENST00000329291 LRRC8AQ8IWT6 810 aa17.99■□□□□ 0.47
PGBD2-201ENST00000329291 SMYD4Q8IYR2 804 aaPredicted RBP17.99■□□□□ 0.47
PGBD2-201ENST00000329291 MTMR8Q96EF0 704 aa17.99■□□□□ 0.47
PGBD2-201ENST00000329291 CUL4BQ13620 913 aa17.98■□□□□ 0.47
PGBD2-201ENST00000329291 NAALADL2Q58DX5 795 aa17.98■□□□□ 0.47
PGBD2-201ENST00000329291 GPATCH4Q5T3I0 446 aaKnown RBP17.98■□□□□ 0.47
PGBD2-201ENST00000329291 TRIML1Q8N9V2 468 aa17.98■□□□□ 0.47
PGBD2-201ENST00000329291 NAP1L5Q96NT1 182 aaPredicted RBP17.98■□□□□ 0.47
PGBD2-201ENST00000329291 PLIN2Q99541 437 aa17.98■□□□□ 0.47
PGBD2-201ENST00000329291 ATRNL1Q5VV63 1379 aa17.98■□□□□ 0.47
PGBD2-201ENST00000329291 ADCY7P51828 1080 aa17.98■□□□□ 0.47
PGBD2-201ENST00000329291 TPM4P67936 248 aa17.98■□□□□ 0.47
PGBD2-201ENST00000329291 UBE2SQ16763 222 aa17.98■□□□□ 0.47
PGBD2-201ENST00000329291 PTPN21Q16825 1174 aa17.98■□□□□ 0.47
PGBD2-201ENST00000329291 ABCB5Q2M3G0 1257 aa17.98■□□□□ 0.47
PGBD2-201ENST00000329291 NEK8Q86SG6 692 aa17.98■□□□□ 0.47
PGBD2-201ENST00000329291 AGBL3Q8NEM8 1001 aa17.98■□□□□ 0.47
PGBD2-201ENST00000329291 JDP2Q8WYK2 163 aa17.98■□□□□ 0.47
PGBD2-201ENST00000329291 CSRNP1Q96S65 589 aa17.98■□□□□ 0.47
PGBD2-201ENST00000329291 CD2APQ9Y5K6 639 aa17.98■□□□□ 0.47
PGBD2-201ENST00000329291 UTRNP46939 3433 aa17.97■□□□□ 0.47
PGBD2-201ENST00000329291 COL2A1P02458 1487 aaPredicted RBP17.97■□□□□ 0.47
PGBD2-201ENST00000329291 SLFN13Q68D06 897 aa17.97■□□□□ 0.47
PGBD2-201ENST00000329291 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.97■□□□□ 0.47
PGBD2-201ENST00000329291 NUP88Q99567 741 aaPredicted RBP17.97■□□□□ 0.47
PGBD2-201ENST00000329291 hCG_1984214I3L0E3 225 aa17.96■□□□□ 0.47
PGBD2-201ENST00000329291 ZBTB5O15062 677 aa17.96■□□□□ 0.47
PGBD2-201ENST00000329291 GH2P01242 217 aa17.96■□□□□ 0.47
PGBD2-201ENST00000329291 ICA1Q05084 483 aa17.96■□□□□ 0.47
PGBD2-201ENST00000329291 TMEM179Q6ZVK1 233 aa17.96■□□□□ 0.47
PGBD2-201ENST00000329291 CDAN1Q8IWY9 1227 aa17.96■□□□□ 0.47
PGBD2-201ENST00000329291 ZNF713Q8N859 430 aaPredicted RBP17.96■□□□□ 0.47
PGBD2-201ENST00000329291 ZNF70Q9UC06 446 aaPredicted RBP17.96■□□□□ 0.47
PGBD2-201ENST00000329291 MYH4Q9Y623 1939 aa17.96■□□□□ 0.47
PGBD2-201ENST00000329291 PPP1R3GB7ZBB8 358 aa17.96■□□□□ 0.47
PGBD2-201ENST00000329291 NEMFO60524 1076 aa17.96■□□□□ 0.47
PGBD2-201ENST00000329291 PRPHP41219 470 aa17.96■□□□□ 0.47
PGBD2-201ENST00000329291 SLC1A4P43007 532 aa17.96■□□□□ 0.47
PGBD2-201ENST00000329291 SNAP25P60880 206 aa17.96■□□□□ 0.47
PGBD2-201ENST00000329291 POTEDQ86YR6 584 aa17.96■□□□□ 0.47
PGBD2-201ENST00000329291 ENOX1Q8TC92 643 aaKnown RBP17.96■□□□□ 0.47
PGBD2-201ENST00000329291 GSDMAQ96QA5 445 aa17.96■□□□□ 0.47
PGBD2-201ENST00000329291 RIC8AQ9NPQ8 531 aa17.96■□□□□ 0.47
PGBD2-201ENST00000329291 DISC1Q9NRI5 854 aa17.96■□□□□ 0.47
PGBD2-201ENST00000329291 SAMSN1Q9NSI8 373 aaKnown RBP17.96■□□□□ 0.47
PGBD2-201ENST00000329291 R3HCC1Q9Y3T6 440 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms