RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ZKSCAN3Q9BRR0 538 aa14.25□□□□□ -0.13
CCDC60-201ENST00000327554 CARD10Q9BWT7 1032 aa14.25□□□□□ -0.13
CCDC60-201ENST00000327554 LRWD1Q9UFC0 647 aa14.25□□□□□ -0.13
CCDC60-201ENST00000327554 FBXO3Q9UK99 471 aa14.25□□□□□ -0.13
CCDC60-201ENST00000327554 TCRBV5S4A2TA0A5A2 114 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 BMP15O95972 392 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 RPN1P04843 607 aaKnown RBP14.24□□□□□ -0.13
CCDC60-201ENST00000327554 SRGNP10124 158 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 NR1D1P20393 614 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 IFT88Q13099 833 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 DRP2Q13474 957 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 TCIRG1Q13488 830 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 ZNF174Q15697 407 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 CCDC57Q2TAC2 916 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 FKBP15Q5T1M5 1219 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 NFRKBQ6P4R8 1299 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 CCDC43Q96MW1 224 aaKnown RBP14.24□□□□□ -0.13
CCDC60-201ENST00000327554 PHF20Q9BVI0 1012 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 TSGA10Q9BZW7 698 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 PES1O00541 588 aaKnown RBP14.24□□□□□ -0.13
CCDC60-201ENST00000327554 FAM107AO95990 144 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 PDE6AP16499 860 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 MDH1P40925 334 aaKnown RBP14.24□□□□□ -0.13
CCDC60-201ENST00000327554 KLK7P49862 253 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 DNM2P50570 870 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 MRPL12P52815 198 aaKnown RBP14.24□□□□□ -0.13
CCDC60-201ENST00000327554 ATP2B2Q01814 1243 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 WTAPQ15007 396 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 FAM228AQ86W67 206 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 CD302Q8IX05 232 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 ADSSL1Q8N142 457 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 FAXDC2Q96IV6 333 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 SH2D4AQ9H788 454 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 MLXIPQ9HAP2 919 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 RMND1Q9NWS8 449 aa14.24□□□□□ -0.13
CCDC60-201ENST00000327554 SOS2Q07890 1332 aaPredicted RBP14.24□□□□□ -0.13
CCDC60-201ENST00000327554 SRRM3A6NNA2 597 aaPredicted RBP14.23□□□□□ -0.13
CCDC60-201ENST00000327554 TMCO5BA8MYB1 307 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 TACC1O75410 805 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 IDH1O75874 414 aaKnown RBP14.23□□□□□ -0.13
CCDC60-201ENST00000327554 FAM153BP0C7A2 387 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 GCFC2P16383 781 aaKnown RBP14.23□□□□□ -0.13
CCDC60-201ENST00000327554 KRT2P35908 639 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 ZBED6P86452 979 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 ATP2C1P98194 919 aaPredicted RBP14.23□□□□□ -0.13
CCDC60-201ENST00000327554 FAM153CQ494X1 144 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 AKNAD1Q5T1N1 836 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 CFAP58Q5T655 872 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 KRT26Q7Z3Y9 468 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 IFNL3Q8IZI9 196 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 FANCBQ8NB91 859 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 CNNM2Q9H8M5 875 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 ZNHIT6Q9NWK9 470 aaKnown RBP14.23□□□□□ -0.13
CCDC60-201ENST00000327554 DDX20Q9UHI6 824 aaKnown RBP14.23□□□□□ -0.13
CCDC60-201ENST00000327554 FAM153AQ9UHL3 310 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 HYOU1Q9Y4L1 999 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 B4DLN1 442 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 MOCS3O95396 460 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 TCP1P17987 556 aaKnown RBP14.23□□□□□ -0.13
CCDC60-201ENST00000327554 CDK17Q00537 523 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 PTGDRQ13258 359 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 PKN1Q16512 942 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 C8orf74Q6P047 294 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 MREGQ8N565 214 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 TNFRSF25Q93038 417 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 RNF26Q9BY78 433 aaPredicted RBP14.23□□□□□ -0.13
CCDC60-201ENST00000327554 KRT23Q9C075 422 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 THAP9Q9H5L6 903 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 GDF3Q9NR23 364 aa14.23□□□□□ -0.13
CCDC60-201ENST00000327554 RBM12Q9NTZ6 932 aaKnown RBP14.23□□□□□ -0.13
CCDC60-201ENST00000327554 NUTM2BA6NNL0 878 aaPredicted RBP14.22□□□□□ -0.13
CCDC60-201ENST00000327554 NUTM2EB1AL46 878 aaPredicted RBP14.22□□□□□ -0.13
CCDC60-201ENST00000327554 CLSTN1O94985 981 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 CXCR5P32302 372 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 CARSP49589 748 aaKnown RBP14.22□□□□□ -0.13
CCDC60-201ENST00000327554 ZNF654Q8IZM8 581 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 C1orf131Q8NDD1 294 aaKnown RBP14.22□□□□□ -0.13
CCDC60-201ENST00000327554 PSMB7Q99436 277 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 NUP58Q9BVL2 599 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 CENPHQ9H3R5 247 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 SPATA31A3Q5VYP0 1347 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 PATL2C9JE40 543 aaKnown RBP14.22□□□□□ -0.13
CCDC60-201ENST00000327554 GLI1P08151 1106 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 PLEKP08567 350 aaPredicted RBP14.22□□□□□ -0.13
CCDC60-201ENST00000327554 PDHBP11177 359 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 TRIM21P19474 475 aaKnown RBP14.22□□□□□ -0.13
CCDC60-201ENST00000327554 RCAN1P53805 252 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 ITGB3BPQ13352 177 aaPredicted RBP14.22□□□□□ -0.13
CCDC60-201ENST00000327554 IL17AQ16552 155 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 CCDC96Q2M329 555 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 SPRED3Q2MJR0 410 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 TTC38Q5R3I4 469 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 PARP9Q8IXQ6 854 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 RETREG2Q8NC44 543 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 NUP133Q8WUM0 1156 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 ATP6V1G3Q96LB4 118 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 NAPBQ9H115 298 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 ZBTB3Q9H5J0 574 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 EXOC1Q9NV70 894 aa14.22□□□□□ -0.13
CCDC60-201ENST00000327554 NFU1Q9UMS0 254 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms