RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 NEDD9Q14511 834 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 CCDC89Q8N998 374 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 CNOT6LQ96LI5 555 aaKnown RBP12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 GNGT1P63211 74 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 RBL2Q08999 1139 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 CACNA2D3Q8IZS8 1091 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 ECM2O94769 699 aaPredicted RBP12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 ETF1P62495 437 aaKnown RBP12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 NAA25Q14CX7 972 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 ARHGEF16Q5VV41 709 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 CABS1Q96KC9 395 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 CUEDC2Q9H467 287 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 VPS37BQ9H9H4 285 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 MAN1B1Q9UKM7 699 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 ROBO2Q9HCK4 1378 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 CROCC2H7BZ55 1655 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 SH2B2O14492 632 aaPredicted RBP12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 SEMA3EO15041 775 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 TNNI1P19237 187 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 CASP14P31944 242 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 NSMFQ6X4W1 530 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 SIRT2Q8IXJ6 389 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 PROCA1Q8NCQ7 364 aaPredicted RBP12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 KCNG1Q9UIX4 513 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 I3L4J1 428 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 ABCB4P21439 1286 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 PPARDQ03181 441 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 DLGAP5Q15398 846 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 KRT71Q3SY84 523 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 CCDC62Q6P9F0 684 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 TEKT3Q9BXF9 490 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 RAB20Q9NX57 234 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 SPHKAPQ2M3C7 1700 aa12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 MRPL11Q9Y3B7 192 aaKnown RBP12.01□□□□□ -0.49
SNRNP200-201ENST00000323853 ABCC12Q96J65 1359 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 PHLPP2Q6ZVD8 1323 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 COBLO75128 1261 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 TRAPPC10P48553 1259 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 KIF23Q02241 960 aaPredicted RBP12□□□□□ -0.49
SNRNP200-201ENST00000323853 CCT6BQ92526 530 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 RNF26Q9BY78 433 aaPredicted RBP12□□□□□ -0.49
SNRNP200-201ENST00000323853 ATG3Q9NT62 314 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 TRIM37O94972 964 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 APOA5Q6Q788 366 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 FBXO11Q86XK2 927 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 GSDMAQ96QA5 445 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 FAM170AA1A519 330 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 MMP1P03956 469 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 PDE6CP51160 858 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 LGSNQ5TDP6 509 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 ARMCX3Q9UH62 379 aaPredicted RBP12□□□□□ -0.49
SNRNP200-201ENST00000323853 BCORL1Q5H9F3 1711 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 ZNF804BA4D1E1 1349 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 RGS16O15492 202 aaPredicted RBP12□□□□□ -0.49
SNRNP200-201ENST00000323853 KRT15P19012 456 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 CRKLP46109 303 aaKnown RBP12□□□□□ -0.49
SNRNP200-201ENST00000323853 GOLGA8FQ08AF8 430 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 GOLGA8DPQ0D2H9 430 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 ADAM9Q13443 819 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 LMNTD2Q8IXW0 634 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 SMC1BQ8NDV3 1235 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 CDC42BPAQ5VT25 1732 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 QRICH2Q9H0J4 1663 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 GLI2P10070 1586 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 LARGE1O95461 756 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 P4HA1P13674 534 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 TAF12Q16514 161 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 CERKLQ49MI3 558 aaPredicted RBP12□□□□□ -0.49
SNRNP200-201ENST00000323853 NIM1KQ8IY84 436 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 TRIM6Q9C030 488 aaPredicted RBP12□□□□□ -0.49
SNRNP200-201ENST00000323853 CHD1O14646 1710 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 ABCC3O15438 1527 aa12□□□□□ -0.49
SNRNP200-201ENST00000323853 TCP1P17987 556 aaKnown RBP11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 HSPA1LP34931 641 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 DPCR1Q3MIW9 517 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 ZNF658Q5TYW1 1059 aaPredicted RBP11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 DEPTORQ8TB45 409 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 FAM71BQ8TC56 605 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 MGARPQ8TDB4 240 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 P3H4Q92791 437 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 EPN1Q9Y6I3 576 aaPredicted RBP11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 UNC13BO14795 1591 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 RESTQ13127 1097 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 PI4K2BQ8TCG2 481 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 AS3MTQ9HBK9 375 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 USP21Q9UK80 565 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 VSIG1Q86XK7 387 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 MCUR1Q96AQ8 359 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 FNBP4Q8N3X1 1017 aaPredicted RBP11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 AFAP1L2Q8N4X5 818 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 ZSCAN26Q16670 478 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 ARHGEF2Q92974 986 aaKnown RBP11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 CFAP57Q96MR6 1250 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 CAPS2Q9BXY5 557 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 METTL14Q9HCE5 456 aaKnown RBP11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 STAM2O75886 525 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 CD19P15391 556 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 PPP2R5EQ16537 467 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 ANKRD42Q8N9B4 389 aa11.99□□□□□ -0.49
SNRNP200-201ENST00000323853 ANKARQ7Z5J8 1434 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms