RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 TGFB2P61812 414 aa10.37□□□□□ -0.75
CD46-202ENST00000322918 SIAH1Q8IUQ4 282 aa10.37□□□□□ -0.75
CD46-202ENST00000322918 FOXP4Q8IVH2 680 aaPredicted RBP10.37□□□□□ -0.75
CD46-202ENST00000322918 MICALL2Q8IY33 904 aa10.37□□□□□ -0.75
CD46-202ENST00000322918 CCDC148Q8NFR7 591 aa10.37□□□□□ -0.75
CD46-202ENST00000322918 TBCKQ8TEA7 893 aa10.37□□□□□ -0.75
CD46-202ENST00000322918 KANSL2Q9H9L4 492 aa10.37□□□□□ -0.75
CD46-202ENST00000322918 C6orf50Q9HD87 102 aa10.37□□□□□ -0.75
CD46-202ENST00000322918 MYOZ2Q9NPC6 264 aa10.37□□□□□ -0.75
CD46-202ENST00000322918 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.37□□□□□ -0.75
CD46-202ENST00000322918 ANO10Q9NW15 660 aa10.37□□□□□ -0.75
CD46-202ENST00000322918 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.37□□□□□ -0.75
CD46-202ENST00000322918 SRPRBQ9Y5M8 271 aaKnown RBP10.37□□□□□ -0.75
CD46-202ENST00000322918 CDK5RAP2Q96SN8 1893 aa10.37□□□□□ -0.75
CD46-202ENST00000322918 DYNC1I1O14576 645 aa10.37□□□□□ -0.75
CD46-202ENST00000322918 CTAGE5O15320 804 aa10.37□□□□□ -0.75
CD46-202ENST00000322918 LMOD1P29536 600 aaPredicted RBP10.37□□□□□ -0.75
CD46-202ENST00000322918 DMTNQ08495 405 aa10.37□□□□□ -0.75
CD46-202ENST00000322918 RASA3Q14644 834 aa10.37□□□□□ -0.75
CD46-202ENST00000322918 KARSQ15046 597 aaKnown RBP10.37□□□□□ -0.75
CD46-202ENST00000322918 IL17AQ16552 155 aa10.37□□□□□ -0.75
CD46-202ENST00000322918 KRBA2Q6ZNG9 492 aa10.37□□□□□ -0.75
CD46-202ENST00000322918 MTERF4Q7Z6M4 381 aaKnown RBP10.37□□□□□ -0.75
CD46-202ENST00000322918 SMYD4Q8IYR2 804 aaPredicted RBP10.37□□□□□ -0.75
CD46-202ENST00000322918 CEP57L1Q8IYX8 460 aa10.37□□□□□ -0.75
CD46-202ENST00000322918 REXO1Q8N1G1 1221 aaKnown RBP10.37□□□□□ -0.75
CD46-202ENST00000322918 NDUFB10O96000 172 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 HDLBPQ00341 1268 aaKnown RBP10.36□□□□□ -0.75
CD46-202ENST00000322918 CCDC174Q6PII3 467 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 TRMT44Q8IYL2 757 aaKnown RBP10.36□□□□□ -0.75
CD46-202ENST00000322918 UPF1Q92900 1129 aaKnown RBP eCLIP10.36□□□□□ -0.754e-12■■□□□ 13.3
CD46-202ENST00000322918 SPZ1Q9BXG8 430 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 NRBP1Q9UHY1 535 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 MAPK8IP1Q9UQF2 711 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 ZNF500O60304 480 aaPredicted RBP10.36□□□□□ -0.75
CD46-202ENST00000322918 MARCH6O60337 910 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 TXKP42681 527 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 KIFC2Q96AC6 838 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 CCDC17Q96LX7 622 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 GMLQ99445 158 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 PCDHA1Q9Y5I3 950 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 IGKV6D-41A0A0C4DH26 115 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 ZSCAN20P17040 1043 aaPredicted RBP10.36□□□□□ -0.75
CD46-202ENST00000322918 HOXA13P31271 388 aaPredicted RBP10.36□□□□□ -0.75
CD46-202ENST00000322918 TECP42680 631 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 QRICH1Q2TAL8 776 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 ASPRV1Q53RT3 343 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 KIAA1755Q5JYT7 1200 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 TMEM179Q6ZVK1 233 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 FEZ1Q99689 392 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 CNOT7Q9UIV1 285 aaKnown RBP10.36□□□□□ -0.75
CD46-202ENST00000322918 HPSEQ9Y251 543 aa10.36□□□□□ -0.75
CD46-202ENST00000322918 TDP2O95551 362 aa10.35□□□□□ -0.75
CD46-202ENST00000322918 ADCY7P51828 1080 aa10.35□□□□□ -0.75
CD46-202ENST00000322918 STX17P56962 302 aa10.35□□□□□ -0.75
CD46-202ENST00000322918 NONOQ15233 471 aaKnown RBP eCLIP10.35□□□□□ -0.75
CD46-202ENST00000322918 CDC37Q16543 378 aaPredicted RBP10.35□□□□□ -0.75
CD46-202ENST00000322918 FAM83BQ5T0W9 1011 aa10.35□□□□□ -0.75
CD46-202ENST00000322918 RBM43Q6ZSC3 357 aaKnown RBP10.35□□□□□ -0.75
CD46-202ENST00000322918 FILIP1Q7Z7B0 1213 aa10.35□□□□□ -0.75
CD46-202ENST00000322918 LZTS2Q9BRK4 669 aa10.35□□□□□ -0.75
CD46-202ENST00000322918 FBXO28Q9NVF7 368 aa10.35□□□□□ -0.75
CD46-202ENST00000322918 IGSF3O75054 1194 aa10.35□□□□□ -0.75
CD46-202ENST00000322918 GNA11P29992 359 aa10.35□□□□□ -0.75
CD46-202ENST00000322918 UBXN2AP68543 259 aa10.35□□□□□ -0.75
CD46-202ENST00000322918 POSTNQ15063 836 aa10.35□□□□□ -0.75
CD46-202ENST00000322918 FCHSD1Q86WN1 690 aa10.35□□□□□ -0.75
CD46-202ENST00000322918 POTEDQ86YR6 584 aa10.35□□□□□ -0.75
CD46-202ENST00000322918 CCDC94Q9BW85 323 aaPredicted RBP10.35□□□□□ -0.75
CD46-202ENST00000322918 ZBTB22O15209 634 aa10.34□□□□□ -0.75
CD46-202ENST00000322918 ENTPD3O75355 529 aa10.34□□□□□ -0.75
CD46-202ENST00000322918 SMC2O95347 1197 aa10.34□□□□□ -0.75
CD46-202ENST00000322918 SPDYE2Q495Y8 402 aa10.34□□□□□ -0.75
CD46-202ENST00000322918 CCDC12Q8WUD4 166 aaPredicted RBP10.34□□□□□ -0.75
CD46-202ENST00000322918 FAM151AQ8WW52 585 aa10.34□□□□□ -0.75
CD46-202ENST00000322918 EEF2KMTQ96G04 330 aa10.34□□□□□ -0.75
CD46-202ENST00000322918 EHD4Q9H223 541 aa10.34□□□□□ -0.75
CD46-202ENST00000322918 RIOX1Q9H6W3 641 aa10.34□□□□□ -0.75
CD46-202ENST00000322918 PSTPIP2Q9H939 334 aa10.34□□□□□ -0.75
CD46-202ENST00000322918 MYO3BQ8WXR4 1341 aa10.34□□□□□ -0.75
CD46-202ENST00000322918 PTGER2P43116 358 aa10.34□□□□□ -0.75
CD46-202ENST00000322918 FKBP1AP62942 108 aaKnown RBP10.34□□□□□ -0.75
CD46-202ENST00000322918 UTP14CQ5TAP6 766 aaKnown RBP10.34□□□□□ -0.75
CD46-202ENST00000322918 TATDN1Q6P1N9 297 aa10.34□□□□□ -0.75
CD46-202ENST00000322918 DTHD1Q6ZMT9 781 aa10.34□□□□□ -0.75
CD46-202ENST00000322918 DHX40Q8IX18 779 aaKnown RBP10.34□□□□□ -0.75
CD46-202ENST00000322918 PDLIM2Q96JY6 352 aa10.34□□□□□ -0.75
CD46-202ENST00000322918 ZMYND12Q9H0C1 365 aa10.34□□□□□ -0.75
CD46-202ENST00000322918 ZNF541Q9H0D2 1346 aa10.34□□□□□ -0.75
CD46-202ENST00000322918 MYH15Q9Y2K3 1946 aa10.34□□□□□ -0.75
CD46-202ENST00000322918 CNTNAP1P78357 1384 aa10.34□□□□□ -0.75
CD46-202ENST00000322918 PNMA6FA0A0J9YX94 578 aa10.33□□□□□ -0.76
CD46-202ENST00000322918 ZBTB5O15062 677 aa10.33□□□□□ -0.76
CD46-202ENST00000322918 ATP1A3P13637 1013 aa10.33□□□□□ -0.76
CD46-202ENST00000322918 ATP2C1P98194 919 aaPredicted RBP10.33□□□□□ -0.76
CD46-202ENST00000322918 IQCB1Q15051 598 aa10.33□□□□□ -0.76
CD46-202ENST00000322918 SLC30A10Q6XR72 485 aa10.33□□□□□ -0.76
CD46-202ENST00000322918 CCDC125Q86Z20 511 aa10.33□□□□□ -0.76
CD46-202ENST00000322918 SMARCE1Q969G3 411 aa10.33□□□□□ -0.76
CD46-202ENST00000322918 MRIQ9BWK5 157 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms