RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 PTPRMP28827 1452 aa18.27■□□□□ 0.51
CLIP4-201ENST00000320081 CEP152O94986 1710 aa18.27■□□□□ 0.51
CLIP4-201ENST00000320081 SFMBT2Q5VUG0 894 aa18.27■□□□□ 0.51
CLIP4-201ENST00000320081 SHC4Q6S5L8 630 aa18.27■□□□□ 0.51
CLIP4-201ENST00000320081 TOGARAM2Q6ZUX3 1019 aa18.27■□□□□ 0.51
CLIP4-201ENST00000320081 CCDC155Q8N6L0 562 aa18.27■□□□□ 0.51
CLIP4-201ENST00000320081 ENAHQ8N8S7 591 aaPredicted RBP18.27■□□□□ 0.51
CLIP4-201ENST00000320081 TEKT1Q969V4 418 aa18.27■□□□□ 0.51
CLIP4-201ENST00000320081 PPIP5K2O43314 1243 aa18.26■□□□□ 0.51
CLIP4-201ENST00000320081 FAM26FQ5R3K3 315 aa18.26■□□□□ 0.51
CLIP4-201ENST00000320081 CDCA7Q9BWT1 371 aaPredicted RBP18.26■□□□□ 0.51
CLIP4-201ENST00000320081 CLIC2O15247 247 aa18.26■□□□□ 0.51
CLIP4-201ENST00000320081 TRIM14Q14142 442 aa18.26■□□□□ 0.51
CLIP4-201ENST00000320081 PAGE5Q96GU1 130 aa18.26■□□□□ 0.51
CLIP4-201ENST00000320081 DPH5Q9H2P9 285 aa18.26■□□□□ 0.51
CLIP4-201ENST00000320081 UBN2Q6ZU65 1347 aa18.26■□□□□ 0.51
CLIP4-201ENST00000320081 COL9A3Q14050 684 aaPredicted RBP18.26■□□□□ 0.51
CLIP4-201ENST00000320081 PAXIP1Q6ZW49 1069 aaPredicted RBP18.26■□□□□ 0.51
CLIP4-201ENST00000320081 CCDC84Q86UT8 332 aaPredicted RBP18.26■□□□□ 0.51
CLIP4-201ENST00000320081 CLEC10AQ8IUN9 316 aa18.26■□□□□ 0.51
CLIP4-201ENST00000320081 GSG1L2A8MUP6 293 aa18.26■□□□□ 0.51
CLIP4-201ENST00000320081 LIFRP42702 1097 aa18.26■□□□□ 0.51
CLIP4-201ENST00000320081 CLCN6P51797 869 aa18.26■□□□□ 0.51
CLIP4-201ENST00000320081 PEX26Q7Z412 305 aa18.26■□□□□ 0.51
CLIP4-201ENST00000320081 GSDMAQ96QA5 445 aa18.26■□□□□ 0.51
CLIP4-201ENST00000320081 ATP8A2Q9NTI2 1148 aa18.26■□□□□ 0.51
CLIP4-201ENST00000320081 DDX25Q9UHL0 483 aaKnown RBP18.26■□□□□ 0.51
CLIP4-201ENST00000320081 SRGAP2O75044 1071 aa18.25■□□□□ 0.51
CLIP4-201ENST00000320081 DNM2P50570 870 aa18.25■□□□□ 0.51
CLIP4-201ENST00000320081 ADGRL3Q9HAR2 1447 aa18.25■□□□□ 0.51
CLIP4-201ENST00000320081 SFI1A8K8P3 1242 aa18.25■□□□□ 0.51
CLIP4-201ENST00000320081 PLCG1P19174 1290 aa18.25■□□□□ 0.51
CLIP4-201ENST00000320081 GPR161Q8N6U8 529 aaKnown RBP18.25■□□□□ 0.51
CLIP4-201ENST00000320081 GIMAP7Q8NHV1 300 aa18.25■□□□□ 0.51
CLIP4-201ENST00000320081 LY9Q9HBG7 655 aa18.25■□□□□ 0.51
CLIP4-201ENST00000320081 H7C1D1 291 aa18.25■□□□□ 0.51
CLIP4-201ENST00000320081 ADAM9Q13443 819 aa18.25■□□□□ 0.51
CLIP4-201ENST00000320081 PDIA6Q15084 440 aa18.25■□□□□ 0.51
CLIP4-201ENST00000320081 VSTM4Q8IW00 320 aa18.25■□□□□ 0.51
CLIP4-201ENST00000320081 MARCH10Q8NA82 808 aaPredicted RBP18.25■□□□□ 0.51
CLIP4-201ENST00000320081 HPS3Q969F9 1004 aa18.25■□□□□ 0.51
CLIP4-201ENST00000320081 ADGRB3O60242 1522 aa18.25■□□□□ 0.51
CLIP4-201ENST00000320081 VIMP08670 466 aaKnown RBP18.24■□□□□ 0.51
CLIP4-201ENST00000320081 ALAS1P13196 640 aa18.24■□□□□ 0.51
CLIP4-201ENST00000320081 ICA1Q05084 483 aa18.24■□□□□ 0.51
CLIP4-201ENST00000320081 ZSCAN26Q16670 478 aa18.24■□□□□ 0.51
CLIP4-201ENST00000320081 CERKLQ49MI3 558 aaPredicted RBP18.24■□□□□ 0.51
CLIP4-201ENST00000320081 CLEC17AQ6ZS10 378 aa18.24■□□□□ 0.51
CLIP4-201ENST00000320081 PANK4Q9NVE7 773 aa18.24■□□□□ 0.51
CLIP4-201ENST00000320081 ANKARQ7Z5J8 1434 aa18.24■□□□□ 0.51
CLIP4-201ENST00000320081 PSDA5PKW4 1024 aaPredicted RBP18.24■□□□□ 0.51
CLIP4-201ENST00000320081 RPS6KA1Q15418 735 aa18.24■□□□□ 0.51
CLIP4-201ENST00000320081 UAP1Q16222 522 aaPredicted RBP18.24■□□□□ 0.51
CLIP4-201ENST00000320081 CAPN12Q6ZSI9 719 aa18.24■□□□□ 0.51
CLIP4-201ENST00000320081 MICALCLQ6ZW33 695 aa18.24■□□□□ 0.51
CLIP4-201ENST00000320081 SH3RF3Q8TEJ3 882 aaPredicted RBP18.24■□□□□ 0.51
CLIP4-201ENST00000320081 TESPA1A2RU30 521 aaPredicted RBP18.24■□□□□ 0.51
CLIP4-201ENST00000320081 POTEMA6NI47 508 aa18.24■□□□□ 0.51
CLIP4-201ENST00000320081 BUB1BO60566 1050 aaPredicted RBP18.24■□□□□ 0.51
CLIP4-201ENST00000320081 GAS7O60861 476 aa18.24■□□□□ 0.51
CLIP4-201ENST00000320081 GRIN1Q05586 938 aa18.24■□□□□ 0.51
CLIP4-201ENST00000320081 SLFN13Q68D06 897 aa18.24■□□□□ 0.51
CLIP4-201ENST00000320081 LMBR1Q8WVP7 490 aa18.24■□□□□ 0.51
CLIP4-201ENST00000320081 IMPG2Q9BZV3 1241 aa18.24■□□□□ 0.51
CLIP4-201ENST00000320081 PPANQ9NQ55 473 aaKnown RBP18.24■□□□□ 0.51
CLIP4-201ENST00000320081 MYO3AQ8NEV4 1616 aa18.24■□□□□ 0.51
CLIP4-201ENST00000320081 IVLP07476 585 aa18.23■□□□□ 0.51
CLIP4-201ENST00000320081 ACTN2P35609 894 aa18.23■□□□□ 0.51
CLIP4-201ENST00000320081 FNBP1Q96RU3 617 aa18.23■□□□□ 0.51
CLIP4-201ENST00000320081 ARMCX3Q9UH62 379 aaPredicted RBP18.23■□□□□ 0.51
CLIP4-201ENST00000320081 MINPP1Q9UNW1 487 aa18.23■□□□□ 0.51
CLIP4-201ENST00000320081 SRPRBQ9Y5M8 271 aaKnown RBP18.23■□□□□ 0.51
CLIP4-201ENST00000320081 EFCAB8A8MWE9 144 aa18.23■□□□□ 0.51
CLIP4-201ENST00000320081 IKBKBO14920 756 aa18.23■□□□□ 0.51
CLIP4-201ENST00000320081 HOXA13P31271 388 aaPredicted RBP18.23■□□□□ 0.51
CLIP4-201ENST00000320081 SLC7A5Q01650 507 aa18.23■□□□□ 0.51
CLIP4-201ENST00000320081 PARD6BQ9BYG5 372 aa18.23■□□□□ 0.51
CLIP4-201ENST00000320081 LRRN2O75325 713 aa18.23■□□□□ 0.51
CLIP4-201ENST00000320081 KRT31Q15323 416 aa18.23■□□□□ 0.51
CLIP4-201ENST00000320081 H0YIN7 160 aa18.23■□□□□ 0.51
CLIP4-201ENST00000320081 FTCDO95954 541 aa18.23■□□□□ 0.51
CLIP4-201ENST00000320081 XRCC5P13010 732 aaKnown RBP18.23■□□□□ 0.51
CLIP4-201ENST00000320081 PTPREP23469 700 aa18.23■□□□□ 0.51
CLIP4-201ENST00000320081 ST7Q9NRC1 585 aa18.23■□□□□ 0.51
CLIP4-201ENST00000320081 SERPINB2P05120 415 aa18.22■□□□□ 0.51
CLIP4-201ENST00000320081 LONRF2Q1L5Z9 754 aa18.22■□□□□ 0.51
CLIP4-201ENST00000320081 TRIML1Q8N9V2 468 aa18.22■□□□□ 0.51
CLIP4-201ENST00000320081 MGARPQ8TDB4 240 aa18.22■□□□□ 0.51
CLIP4-201ENST00000320081 NUP58Q9BVL2 599 aa18.22■□□□□ 0.51
CLIP4-201ENST00000320081 CTDNEP1O95476 244 aa18.22■□□□□ 0.51
CLIP4-201ENST00000320081 CYP19A1P11511 503 aaPredicted RBP18.22■□□□□ 0.51
CLIP4-201ENST00000320081 PHLDB2Q86SQ0 1253 aa18.22■□□□□ 0.51
CLIP4-201ENST00000320081 FDPSP14324 419 aaKnown RBP18.22■□□□□ 0.51
CLIP4-201ENST00000320081 CALCOCO2Q13137 446 aa18.22■□□□□ 0.51
CLIP4-201ENST00000320081 MIGA2Q7L4E1 593 aa18.22■□□□□ 0.51
CLIP4-201ENST00000320081 STAG2Q8N3U4 1231 aa18.22■□□□□ 0.51
CLIP4-201ENST00000320081 CDC23Q9UJX2 597 aa18.22■□□□□ 0.51
CLIP4-201ENST00000320081 DDAH1O94760 285 aa18.21■□□□□ 0.51
CLIP4-201ENST00000320081 ENOX1Q8TC92 643 aaKnown RBP18.21■□□□□ 0.51
CLIP4-201ENST00000320081 ISCA1Q9BUE6 129 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms