RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 SNCAIPQ9Y6H5 919 aa35.89■■■■□ 3.34
NECTIN3-201ENST00000319792 PTPRFP10586 1907 aa35.89■■■■□ 3.34
NECTIN3-201ENST00000319792 IREB2P48200 963 aaKnown RBP35.88■■■■□ 3.33
NECTIN3-201ENST00000319792 TRAPPC10P48553 1259 aa35.88■■■■□ 3.33
NECTIN3-201ENST00000319792 NOM1Q5C9Z4 860 aaKnown RBP35.88■■■■□ 3.33
NECTIN3-201ENST00000319792 SPTLC2O15270 562 aa35.88■■■■□ 3.33
NECTIN3-201ENST00000319792 VGLL4Q14135 290 aa35.88■■■■□ 3.33
NECTIN3-201ENST00000319792 MAP3K11Q16584 847 aa35.88■■■■□ 3.33
NECTIN3-201ENST00000319792 C12orf42Q96LP6 360 aa35.88■■■■□ 3.33
NECTIN3-201ENST00000319792 EMILIN3Q9NT22 766 aa35.88■■■■□ 3.33
NECTIN3-201ENST00000319792 ZHX2Q9Y6X8 837 aa35.88■■■■□ 3.33
NECTIN3-201ENST00000319792 ADCY7P51828 1080 aa35.87■■■■□ 3.33
NECTIN3-201ENST00000319792 PIK3AP1Q6ZUJ8 805 aa35.87■■■■□ 3.33
NECTIN3-201ENST00000319792 AMNQ9BXJ7 453 aa35.87■■■■□ 3.33
NECTIN3-201ENST00000319792 MORC2Q9Y6X9 1032 aaPredicted RBP35.87■■■■□ 3.33
NECTIN3-201ENST00000319792 C19orf81C9J6K1 198 aa35.86■■■■□ 3.33
NECTIN3-201ENST00000319792 RANBP17Q9H2T7 1088 aaKnown RBP35.86■■■■□ 3.33
NECTIN3-201ENST00000319792 RIC8AQ9NPQ8 531 aa35.86■■■■□ 3.33
NECTIN3-201ENST00000319792 GOLGA6L4A6NEF3 574 aa35.85■■■■□ 3.33
NECTIN3-201ENST00000319792 FBXO11Q86XK2 927 aa35.85■■■■□ 3.33
NECTIN3-201ENST00000319792 EIF4ENIF1Q9NRA8 985 aaKnown RBP35.85■■■■□ 3.33
NECTIN3-201ENST00000319792 AFG3L2Q9Y4W6 797 aa35.85■■■■□ 3.33
NECTIN3-201ENST00000319792 PCDHA1Q9Y5I3 950 aa35.85■■■■□ 3.33
NECTIN3-201ENST00000319792 CSADQ9Y600 493 aa35.85■■■■□ 3.33
NECTIN3-201ENST00000319792 PPP6R2O75170 966 aa35.84■■■■□ 3.33
NECTIN3-201ENST00000319792 VCAM1P19320 739 aa35.84■■■■□ 3.33
NECTIN3-201ENST00000319792 KRT25Q7Z3Z0 450 aa35.84■■■■□ 3.33
NECTIN3-201ENST00000319792 RASGRP4Q8TDF6 673 aa35.84■■■■□ 3.33
NECTIN3-201ENST00000319792 GLT8D2Q9H1C3 349 aa35.84■■■■□ 3.33
NECTIN3-201ENST00000319792 PCDHB6Q9Y5E3 794 aa35.84■■■■□ 3.33
NECTIN3-201ENST00000319792 CCDC194A0A1B0GVG4 234 aa35.83■■■■□ 3.33
NECTIN3-201ENST00000319792 TRIM75PA6NK02 468 aa35.83■■■■□ 3.33
NECTIN3-201ENST00000319792 REXO1Q8N1G1 1221 aaKnown RBP35.83■■■■□ 3.33
NECTIN3-201ENST00000319792 PCDHA7Q9UN72 937 aa35.83■■■■□ 3.33
NECTIN3-201ENST00000319792 POTEIP0CG38 1075 aa35.83■■■■□ 3.33
NECTIN3-201ENST00000319792 POTEJP0CG39 1038 aa35.83■■■■□ 3.33
NECTIN3-201ENST00000319792 ME1P48163 572 aa35.83■■■■□ 3.33
NECTIN3-201ENST00000319792 TRAF1Q13077 416 aa35.83■■■■□ 3.33
NECTIN3-201ENST00000319792 JMYQ8N9B5 988 aa35.83■■■■□ 3.33
NECTIN3-201ENST00000319792 CEP131Q9UPN4 1083 aa35.83■■■■□ 3.33
NECTIN3-201ENST00000319792 CLEC11AQ9Y240 323 aa35.83■■■■□ 3.33
NECTIN3-201ENST00000319792 DCAF8L1A6NGE4 600 aa35.82■■■■□ 3.32
NECTIN3-201ENST00000319792 SNAP25P60880 206 aa35.82■■■■□ 3.32
NECTIN3-201ENST00000319792 RLFQ13129 1914 aa35.82■■■■□ 3.32
NECTIN3-201ENST00000319792 TTC38Q5R3I4 469 aa35.82■■■■□ 3.32
NECTIN3-201ENST00000319792 CUL5Q93034 780 aa35.82■■■■□ 3.32
NECTIN3-201ENST00000319792 KIFC2Q96AC6 838 aa35.82■■■■□ 3.32
NECTIN3-201ENST00000319792 FBXO28Q9NVF7 368 aa35.82■■■■□ 3.32
NECTIN3-201ENST00000319792 BMP15O95972 392 aa35.81■■■■□ 3.32
NECTIN3-201ENST00000319792 DGKZQ13574 1117 aa35.81■■■■□ 3.32
NECTIN3-201ENST00000319792 ADALQ6DHV7 355 aa35.81■■■■□ 3.32
NECTIN3-201ENST00000319792 CAVIN1Q6NZI2 390 aaKnown RBP35.81■■■■□ 3.32
NECTIN3-201ENST00000319792 ANKRD13AQ8IZ07 590 aa35.81■■■■□ 3.32
NECTIN3-201ENST00000319792 SLF1Q9BQI6 1058 aa35.81■■■■□ 3.32
NECTIN3-201ENST00000319792 RRAGCQ9HB90 399 aa35.81■■■■□ 3.32
NECTIN3-201ENST00000319792 SMCHD1A6NHR9 2005 aa35.81■■■■□ 3.32
NECTIN3-201ENST00000319792 A0A1W2PQ27 194 aa35.8■■■■□ 3.32
NECTIN3-201ENST00000319792 A0A1W2PQ64 194 aa35.8■■■■□ 3.32
NECTIN3-201ENST00000319792 A0A1W2PQD8 194 aa35.8■■■■□ 3.32
NECTIN3-201ENST00000319792 MRPL12P52815 198 aaKnown RBP35.8■■■■□ 3.32
NECTIN3-201ENST00000319792 SH3D19Q5HYK7 790 aa35.8■■■■□ 3.32
NECTIN3-201ENST00000319792 PRPF38AQ8NAV1 312 aaKnown RBP35.8■■■■□ 3.32
NECTIN3-201ENST00000319792 LOC285556D6RIA3 1793 aa35.79■■■■□ 3.32
NECTIN3-201ENST00000319792 CLK2P49760 499 aaKnown RBP35.79■■■■□ 3.32
NECTIN3-201ENST00000319792 RBM46Q8TBY0 533 aaKnown RBP35.79■■■■□ 3.32
NECTIN3-201ENST00000319792 RPAP3Q9H6T3 665 aaPredicted RBP35.79■■■■□ 3.32
NECTIN3-201ENST00000319792 PSTPIP2Q9H939 334 aa35.79■■■■□ 3.32
NECTIN3-201ENST00000319792 HMGCS2P54868 508 aa35.78■■■■□ 3.32
NECTIN3-201ENST00000319792 NONOQ15233 471 aaKnown RBP eCLIP35.78■■■■□ 3.32
NECTIN3-201ENST00000319792 AXDND1Q5T1B0 1012 aaPredicted RBP35.78■■■■□ 3.32
NECTIN3-201ENST00000319792 TEX2Q8IWB9 1127 aa35.78■■■■□ 3.32
NECTIN3-201ENST00000319792 TMEM63CQ9P1W3 806 aa35.78■■■■□ 3.32
NECTIN3-201ENST00000319792 WNT7AO00755 349 aa35.78■■■■□ 3.32
NECTIN3-201ENST00000319792 ATP2B1P20020 1258 aa35.78■■■■□ 3.32
NECTIN3-201ENST00000319792 MAP1SQ66K74 1059 aaPredicted RBP35.78■■■■□ 3.32
NECTIN3-201ENST00000319792 SYAP1Q96A49 352 aaPredicted RBP35.78■■■■□ 3.32
NECTIN3-201ENST00000319792 TANGO6Q9C0B7 1094 aa35.78■■■■□ 3.32
NECTIN3-201ENST00000319792 ARMC9Q7Z3E5 817 aa35.77■■■■□ 3.32
NECTIN3-201ENST00000319792 LDHDQ86WU2 507 aa35.77■■■■□ 3.32
NECTIN3-201ENST00000319792 GZF1Q9H116 711 aaPredicted RBP35.77■■■■□ 3.32
NECTIN3-201ENST00000319792 BIN2Q9UBW5 565 aaPredicted RBP35.77■■■■□ 3.32
NECTIN3-201ENST00000319792 PPP1R9AQ9ULJ8 1098 aa35.77■■■■□ 3.32
NECTIN3-201ENST00000319792 LIG1P18858 919 aa35.75■■■■□ 3.31
NECTIN3-201ENST00000319792 MARCKSP29966 332 aaPredicted RBP35.75■■■■□ 3.31
NECTIN3-201ENST00000319792 PPATQ06203 517 aa35.75■■■■□ 3.31
NECTIN3-201ENST00000319792 TTLL12Q14166 644 aaPredicted RBP35.75■■■■□ 3.31
NECTIN3-201ENST00000319792 INF2Q27J81 1249 aa35.75■■■■□ 3.31
NECTIN3-201ENST00000319792 TPRNQ4KMQ1 711 aa35.75■■■■□ 3.31
NECTIN3-201ENST00000319792 JAKMIP3Q5VZ66 844 aa35.75■■■■□ 3.31
NECTIN3-201ENST00000319792 ERO1BQ86YB8 467 aa35.75■■■■□ 3.31
NECTIN3-201ENST00000319792 TMEM260Q9NX78 707 aa35.75■■■■□ 3.31
NECTIN3-201ENST00000319792 TMOD4Q9NZQ9 345 aa35.75■■■■□ 3.31
NECTIN3-201ENST00000319792 USH1GQ495M9 461 aa35.74■■■■□ 3.31
NECTIN3-201ENST00000319792 MOB2Q70IA6 237 aa35.74■■■■□ 3.31
NECTIN3-201ENST00000319792 MYH7BA7E2Y1 1941 aa35.74■■■■□ 3.31
NECTIN3-201ENST00000319792 SPDYE5A6NIY4 337 aa35.73■■■■□ 3.31
NECTIN3-201ENST00000319792 CUTAO60888 179 aa35.73■■■■□ 3.31
NECTIN3-201ENST00000319792 FLOT1O75955 427 aa35.73■■■■□ 3.31
NECTIN3-201ENST00000319792 LDLRAD1Q5T700 205 aa35.73■■■■□ 3.31
NECTIN3-201ENST00000319792 CCAR1Q8IX12 1150 aaKnown RBP35.73■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms