RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 TAL1P17542 331 aaPredicted RBP18.87■□□□□ 0.61
HDDC2-201ENST00000318787 NOVP48745 357 aa18.87■□□□□ 0.61
HDDC2-201ENST00000318787 TRDNQ13061 729 aa18.87■□□□□ 0.61
HDDC2-201ENST00000318787 KIAA1211Q6ZU35 1233 aa18.87■□□□□ 0.61
HDDC2-201ENST00000318787 UBE2Q1Q7Z7E8 422 aa18.87■□□□□ 0.61
HDDC2-201ENST00000318787 ANKLE1Q8NAG6 615 aa18.87■□□□□ 0.61
HDDC2-201ENST00000318787 TRPV1Q8NER1 839 aa18.87■□□□□ 0.61
HDDC2-201ENST00000318787 TTC14Q96N46 770 aa18.87■□□□□ 0.61
HDDC2-201ENST00000318787 ZSCAN10Q96SZ4 725 aaPredicted RBP18.87■□□□□ 0.61
HDDC2-201ENST00000318787 RNF146Q9NTX7 359 aa18.87■□□□□ 0.61
HDDC2-201ENST00000318787 OGDHLQ9ULD0 1010 aa18.87■□□□□ 0.61
HDDC2-201ENST00000318787 CCPG1Q9ULG6 757 aa18.87■□□□□ 0.61
HDDC2-201ENST00000318787 GOLGA8HP0CJ92 632 aa18.86■□□□□ 0.61
HDDC2-201ENST00000318787 OAZ1P54368 228 aa18.86■□□□□ 0.61
HDDC2-201ENST00000318787 SYDE2Q5VT97 1194 aa18.86■□□□□ 0.61
HDDC2-201ENST00000318787 PNMA1Q8ND90 353 aa18.86■□□□□ 0.61
HDDC2-201ENST00000318787 CHST13Q8NET6 341 aa18.86■□□□□ 0.61
HDDC2-201ENST00000318787 TRERF1Q96PN7 1200 aa18.86■□□□□ 0.61
HDDC2-201ENST00000318787 C11orf49Q9H6J7 331 aa18.86■□□□□ 0.61
HDDC2-201ENST00000318787 ACAD9Q9H845 621 aa18.86■□□□□ 0.61
HDDC2-201ENST00000318787 FBXO40Q9UH90 709 aa18.86■□□□□ 0.61
HDDC2-201ENST00000318787 EVI5O60447 810 aa18.85■□□□□ 0.61
HDDC2-201ENST00000318787 SLC34A2O95436 690 aa18.85■□□□□ 0.61
HDDC2-201ENST00000318787 CAPN2P17655 700 aa18.85■□□□□ 0.61
HDDC2-201ENST00000318787 ZNF792Q3KQV3 632 aa18.85■□□□□ 0.61
HDDC2-201ENST00000318787 CCDC178Q5BJE1 867 aa18.85■□□□□ 0.61
HDDC2-201ENST00000318787 LHX8Q68G74 356 aa18.85■□□□□ 0.61
HDDC2-201ENST00000318787 TINF2Q9BSI4 451 aa18.85■□□□□ 0.61
HDDC2-201ENST00000318787 ZNF536O15090 1300 aa18.85■□□□□ 0.61
HDDC2-201ENST00000318787 H0YGN5 161 aa18.84■□□□□ 0.61
HDDC2-201ENST00000318787 MSCO60682 206 aa18.84■□□□□ 0.61
HDDC2-201ENST00000318787 PLA2G6O60733 806 aa18.84■□□□□ 0.61
HDDC2-201ENST00000318787 CYP21A2P08686 494 aa18.84■□□□□ 0.61
HDDC2-201ENST00000318787 ZNF543Q08ER8 600 aa18.84■□□□□ 0.61
HDDC2-201ENST00000318787 RALYLQ86SE5 291 aaKnown RBP18.84■□□□□ 0.61
HDDC2-201ENST00000318787 DGKHQ86XP1 1220 aa18.84■□□□□ 0.61
HDDC2-201ENST00000318787 ENAHQ8N8S7 591 aaPredicted RBP18.84■□□□□ 0.61
HDDC2-201ENST00000318787 CNPY2Q9Y2B0 182 aa18.84■□□□□ 0.61
HDDC2-201ENST00000318787 CEP290O15078 2479 aa18.84■□□□□ 0.61
HDDC2-201ENST00000318787 DHX16O60231 1041 aaKnown RBP18.83■□□□□ 0.61
HDDC2-201ENST00000318787 IFIT1BQ5T764 474 aaKnown RBP18.83■□□□□ 0.61
HDDC2-201ENST00000318787 NSMFQ6X4W1 530 aa18.83■□□□□ 0.61
HDDC2-201ENST00000318787 CYB5R4Q7L1T6 521 aa18.83■□□□□ 0.61
HDDC2-201ENST00000318787 CPVLQ9H3G5 476 aa18.83■□□□□ 0.61
HDDC2-201ENST00000318787 ZHX1Q9UKY1 873 aaPredicted RBP18.83■□□□□ 0.61
HDDC2-201ENST00000318787 DIS3Q9Y2L1 958 aaKnown RBP18.83■□□□□ 0.61
HDDC2-201ENST00000318787 RBM8AQ9Y5S9 174 aaKnown RBP18.83■□□□□ 0.61
HDDC2-201ENST00000318787 POTEB2H3BUK9 544 aa18.82■□□□□ 0.6
HDDC2-201ENST00000318787 SEPT4O43236 478 aa18.82■□□□□ 0.6
HDDC2-201ENST00000318787 MUM1L1Q5H9M0 696 aa18.82■□□□□ 0.6
HDDC2-201ENST00000318787 GJC2Q5T442 439 aaPredicted RBP18.82■□□□□ 0.6
HDDC2-201ENST00000318787 CHST3Q7LGC8 479 aa18.82■□□□□ 0.6
HDDC2-201ENST00000318787 C7orf61Q8IZ16 206 aa18.82■□□□□ 0.6
HDDC2-201ENST00000318787 UBA5Q9GZZ9 404 aa18.82■□□□□ 0.6
HDDC2-201ENST00000318787 RANBP17Q9H2T7 1088 aaKnown RBP18.82■□□□□ 0.6
HDDC2-201ENST00000318787 ANO2Q9NQ90 1003 aa18.82■□□□□ 0.6
HDDC2-201ENST00000318787 NR2E3Q9Y5X4 410 aa18.82■□□□□ 0.6
HDDC2-201ENST00000318787 TAF6LQ9Y6J9 622 aa18.82■□□□□ 0.6
HDDC2-201ENST00000318787 E7EWF7 191 aa18.81■□□□□ 0.6
HDDC2-201ENST00000318787 ICAM1P05362 532 aa18.81■□□□□ 0.6
HDDC2-201ENST00000318787 NT5C2P49902 561 aa18.81■□□□□ 0.6
HDDC2-201ENST00000318787 MNX1P50219 401 aaPredicted RBP18.81■□□□□ 0.6
HDDC2-201ENST00000318787 CNTN2Q02246 1040 aa18.81■□□□□ 0.6
HDDC2-201ENST00000318787 TKFCQ3LXA3 575 aa18.81■□□□□ 0.6
HDDC2-201ENST00000318787 ESYT1Q9BSJ8 1104 aa18.81■□□□□ 0.6
HDDC2-201ENST00000318787 A1CFQ9NQ94 594 aaKnown RBP18.81■□□□□ 0.6
HDDC2-201ENST00000318787 LCTP09848 1927 aa18.81■□□□□ 0.6
HDDC2-201ENST00000318787 DNAJC25-GNG10A0A024R161 153 aa18.81■□□□□ 0.6
HDDC2-201ENST00000318787 ERICH2A1L162 156 aa18.81■□□□□ 0.6
HDDC2-201ENST00000318787 USH1GQ495M9 461 aa18.81■□□□□ 0.6
HDDC2-201ENST00000318787 BMP2KLQ5H9B9 411 aa18.81■□□□□ 0.6
HDDC2-201ENST00000318787 GPATCH4Q5T3I0 446 aaKnown RBP18.81■□□□□ 0.6
HDDC2-201ENST00000318787 BTNL9Q6UXG8 535 aa18.81■□□□□ 0.6
HDDC2-201ENST00000318787 NCOA7Q8NI08 942 aa18.81■□□□□ 0.6
HDDC2-201ENST00000318787 LENG1Q96BZ8 264 aaPredicted RBP18.81■□□□□ 0.6
HDDC2-201ENST00000318787 SENP6Q9GZR1 1112 aaPredicted RBP18.81■□□□□ 0.6
HDDC2-201ENST00000318787 PFASO15067 1338 aa18.8■□□□□ 0.6
HDDC2-201ENST00000318787 PTPDC1A2A3K4 754 aa18.8■□□□□ 0.6
HDDC2-201ENST00000318787 KBTBD13C9JR72 458 aa18.8■□□□□ 0.6
HDDC2-201ENST00000318787 IFIT3O14879 490 aaKnown RBP18.8■□□□□ 0.6
HDDC2-201ENST00000318787 IGHA2P01877 340 aa18.8■□□□□ 0.6
HDDC2-201ENST00000318787 PARP1P09874 1014 aaKnown RBP18.8■□□□□ 0.6
HDDC2-201ENST00000318787 SNHG28P0DPA3 235 aa18.8■□□□□ 0.6
HDDC2-201ENST00000318787 RARBP10826 455 aa18.8■□□□□ 0.6
HDDC2-201ENST00000318787 CASC1Q6TDU7 716 aa18.8■□□□□ 0.6
HDDC2-201ENST00000318787 MAP4K1Q92918 833 aa18.8■□□□□ 0.6
HDDC2-201ENST00000318787 VAT1LQ9HCJ6 419 aa18.8■□□□□ 0.6
HDDC2-201ENST00000318787 AKR1A1P14550 325 aa18.79■□□□□ 0.6
HDDC2-201ENST00000318787 ATN1P54259 1190 aaPredicted RBP18.79■□□□□ 0.6
HDDC2-201ENST00000318787 STOX1Q6ZVD7 989 aa18.79■□□□□ 0.6
HDDC2-201ENST00000318787 ARRDC4Q8NCT1 418 aa18.79■□□□□ 0.6
HDDC2-201ENST00000318787 XPNPEP3Q9NQH7 507 aa18.79■□□□□ 0.6
HDDC2-201ENST00000318787 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.79■□□□□ 0.6
HDDC2-201ENST00000318787 SYNGAP1Q96PV0 1343 aa18.78■□□□□ 0.6
HDDC2-201ENST00000318787 LRRC37A2A6NM11 1700 aa18.78■□□□□ 0.6
HDDC2-201ENST00000318787 DNM1LO00429 736 aa18.78■□□□□ 0.6
HDDC2-201ENST00000318787 NFIBO00712 420 aa18.78■□□□□ 0.6
HDDC2-201ENST00000318787 PGK1P00558 417 aa18.78■□□□□ 0.6
HDDC2-201ENST00000318787 WTAPQ15007 396 aa18.78■□□□□ 0.6
HDDC2-201ENST00000318787 SART3Q15020 963 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms