RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 QTRT2Q9H974 415 aaKnown RBP23.28■■□□□ 1.32
TTC39C-202ENST00000317571 PLIN4Q96Q06 1357 aa23.28■■□□□ 1.32
TTC39C-202ENST00000317571 CCP110O43303 1012 aa23.28■■□□□ 1.32
TTC39C-202ENST00000317571 PAK1Q13153 545 aa23.28■■□□□ 1.32
TTC39C-202ENST00000317571 CCSER1Q9C0I3 900 aa23.28■■□□□ 1.32
TTC39C-202ENST00000317571 ATP6V0A2Q9Y487 856 aa23.28■■□□□ 1.32
TTC39C-202ENST00000317571 TRIM49BA6NDI0 452 aa23.27■■□□□ 1.32
TTC39C-202ENST00000317571 AKR1B15C9JRZ8 316 aaPredicted RBP23.27■■□□□ 1.32
TTC39C-202ENST00000317571 ZSCAN20P17040 1043 aaPredicted RBP23.27■■□□□ 1.32
TTC39C-202ENST00000317571 TXLNAP40222 546 aa23.27■■□□□ 1.32
TTC39C-202ENST00000317571 PMS1P54277 932 aaKnown RBP23.27■■□□□ 1.32
TTC39C-202ENST00000317571 TXNRD1Q16881 649 aa23.27■■□□□ 1.32
TTC39C-202ENST00000317571 LETM2Q2VYF4 491 aa23.27■■□□□ 1.32
TTC39C-202ENST00000317571 LRRC47Q8N1G4 583 aaKnown RBP23.27■■□□□ 1.32
TTC39C-202ENST00000317571 CPLX3Q8WVH0 158 aa23.27■■□□□ 1.32
TTC39C-202ENST00000317571 TMEM260Q9NX78 707 aa23.27■■□□□ 1.32
TTC39C-202ENST00000317571 MTMR4Q9NYA4 1195 aa23.27■■□□□ 1.32
TTC39C-202ENST00000317571 LIMA1Q9UHB6 759 aaKnown RBP23.27■■□□□ 1.32
TTC39C-202ENST00000317571 MYH8P13535 1937 aa23.27■■□□□ 1.32
TTC39C-202ENST00000317571 COL11A2P13942 1736 aaPredicted RBP23.27■■□□□ 1.32
TTC39C-202ENST00000317571 A0A0U1RQJ8 604 aa23.27■■□□□ 1.31
TTC39C-202ENST00000317571 EIF6P56537 245 aaKnown RBP23.27■■□□□ 1.31
TTC39C-202ENST00000317571 RAD9BQ6WBX8 426 aa23.27■■□□□ 1.31
TTC39C-202ENST00000317571 SLF2Q8IX21 1173 aa23.27■■□□□ 1.31
TTC39C-202ENST00000317571 ATRIPQ8WXE1 791 aa23.27■■□□□ 1.31
TTC39C-202ENST00000317571 RRP36Q96EU6 259 aaKnown RBP23.27■■□□□ 1.31
TTC39C-202ENST00000317571 RIOX1Q9H6W3 641 aa23.27■■□□□ 1.31
TTC39C-202ENST00000317571 IGKV6D-41A0A0C4DH26 115 aa23.26■■□□□ 1.31
TTC39C-202ENST00000317571 RNF225M0QZC1 329 aaPredicted RBP23.26■■□□□ 1.31
TTC39C-202ENST00000317571 EDIL3O43854 480 aa23.26■■□□□ 1.31
TTC39C-202ENST00000317571 GYPCP04921 128 aa23.26■■□□□ 1.31
TTC39C-202ENST00000317571 PRPHP41219 470 aa23.26■■□□□ 1.31
TTC39C-202ENST00000317571 FXR1P51114 621 aaKnown RBP eCLIP23.26■■□□□ 1.31
TTC39C-202ENST00000317571 IRF2BP1Q8IU81 584 aa23.26■■□□□ 1.31
TTC39C-202ENST00000317571 FAM177A1Q8N128 213 aaPredicted RBP23.26■■□□□ 1.31
TTC39C-202ENST00000317571 WDR24Q96S15 920 aa23.26■■□□□ 1.31
TTC39C-202ENST00000317571 MRPL44Q9H9J2 332 aaKnown RBP23.26■■□□□ 1.31
TTC39C-202ENST00000317571 KBTBD4Q9NVX7 518 aa23.26■■□□□ 1.31
TTC39C-202ENST00000317571 ZSCAN12O43309 604 aa23.25■■□□□ 1.31
TTC39C-202ENST00000317571 KMT5BQ4FZB7 885 aa23.25■■□□□ 1.31
TTC39C-202ENST00000317571 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.25■■□□□ 1.31
TTC39C-202ENST00000317571 NRXN2Q9P2S2 1712 aa23.25■■□□□ 1.31
TTC39C-202ENST00000317571 LRRC10BA6NIK2 292 aa23.25■■□□□ 1.31
TTC39C-202ENST00000317571 CCNT1O60563 726 aaKnown RBP23.25■■□□□ 1.31
TTC39C-202ENST00000317571 UBA7P41226 1012 aa23.25■■□□□ 1.31
TTC39C-202ENST00000317571 NONOQ15233 471 aaKnown RBP eCLIP23.25■■□□□ 1.31
TTC39C-202ENST00000317571 DOK7Q18PE1 504 aa23.25■■□□□ 1.31
TTC39C-202ENST00000317571 KRT25Q7Z3Z0 450 aa23.25■■□□□ 1.31
TTC39C-202ENST00000317571 ADSSL1Q8N142 457 aa23.25■■□□□ 1.31
TTC39C-202ENST00000317571 PANX2Q96RD6 677 aa23.25■■□□□ 1.31
TTC39C-202ENST00000317571 CTAGE1Q96RT6 745 aa23.25■■□□□ 1.31
TTC39C-202ENST00000317571 COA1Q9GZY4 146 aa23.25■■□□□ 1.31
TTC39C-202ENST00000317571 TAB2Q9NYJ8 693 aa23.25■■□□□ 1.31
TTC39C-202ENST00000317571 BIN2Q9UBW5 565 aaPredicted RBP23.25■■□□□ 1.31
TTC39C-202ENST00000317571 PARP3Q9Y6F1 533 aa23.25■■□□□ 1.31
TTC39C-202ENST00000317571 MFAP3LO75121 409 aa23.24■■□□□ 1.31
TTC39C-202ENST00000317571 TUBB4AP04350 444 aa23.24■■□□□ 1.31
TTC39C-202ENST00000317571 OR52Z1P0C646 297 aa23.24■■□□□ 1.31
TTC39C-202ENST00000317571 SRGNP10124 158 aa23.24■■□□□ 1.31
TTC39C-202ENST00000317571 CASP14P31944 242 aa23.24■■□□□ 1.31
TTC39C-202ENST00000317571 JAKMIP3Q5VZ66 844 aa23.24■■□□□ 1.31
TTC39C-202ENST00000317571 DPP8Q6V1X1 898 aaPredicted RBP23.24■■□□□ 1.31
TTC39C-202ENST00000317571 VPS16Q9H269 839 aa23.24■■□□□ 1.31
TTC39C-202ENST00000317571 PLCG1P19174 1290 aa23.24■■□□□ 1.31
TTC39C-202ENST00000317571 SMARCA1P28370 1054 aa23.24■■□□□ 1.31
TTC39C-202ENST00000317571 SCNN1DP51172 638 aa23.24■■□□□ 1.31
TTC39C-202ENST00000317571 COPB1P53618 953 aaKnown RBP23.24■■□□□ 1.31
TTC39C-202ENST00000317571 KRT27Q7Z3Y8 459 aa23.24■■□□□ 1.31
TTC39C-202ENST00000317571 TBCKQ8TEA7 893 aa23.24■■□□□ 1.31
TTC39C-202ENST00000317571 RMND1Q9NWS8 449 aa23.24■■□□□ 1.31
TTC39C-202ENST00000317571 LAD1O00515 517 aa23.23■■□□□ 1.31
TTC39C-202ENST00000317571 ERCC6LQ2NKX8 1250 aa23.23■■□□□ 1.31
TTC39C-202ENST00000317571 TCP11X2Q5H9J9 407 aa23.23■■□□□ 1.31
TTC39C-202ENST00000317571 COA7Q96BR5 231 aa23.23■■□□□ 1.31
TTC39C-202ENST00000317571 MMTAG2Q9BU76 263 aaKnown RBP23.23■■□□□ 1.31
TTC39C-202ENST00000317571 C6orf50Q9HD87 102 aa23.23■■□□□ 1.31
TTC39C-202ENST00000317571 TTF2Q9UNY4 1162 aaKnown RBP23.23■■□□□ 1.31
TTC39C-202ENST00000317571 KCNJ18B7U540 433 aa23.23■■□□□ 1.31
TTC39C-202ENST00000317571 SNHG28P0DPA3 235 aa23.23■■□□□ 1.31
TTC39C-202ENST00000317571 KCNJ12Q14500 433 aa23.23■■□□□ 1.31
TTC39C-202ENST00000317571 FBXO38Q6PIJ6 1188 aa23.23■■□□□ 1.31
TTC39C-202ENST00000317571 NEK8Q86SG6 692 aa23.23■■□□□ 1.31
TTC39C-202ENST00000317571 POTEDQ86YR6 584 aa23.23■■□□□ 1.31
TTC39C-202ENST00000317571 RASSF8Q8NHQ8 419 aa23.23■■□□□ 1.31
TTC39C-202ENST00000317571 CGNQ9P2M7 1197 aaKnown RBP23.23■■□□□ 1.31
TTC39C-202ENST00000317571 SEC63Q9UGP8 760 aaKnown RBP23.23■■□□□ 1.31
TTC39C-202ENST00000317571 CCDC12Q8WUD4 166 aaPredicted RBP23.22■■□□□ 1.31
TTC39C-202ENST00000317571 ITIH6Q6UXX5 1313 aa23.22■■□□□ 1.31
TTC39C-202ENST00000317571 CABP7Q86V35 215 aa23.22■■□□□ 1.31
TTC39C-202ENST00000317571 COL23A1Q86Y22 540 aaPredicted RBP23.22■■□□□ 1.31
TTC39C-202ENST00000317571 IRX2Q9BZI1 471 aaPredicted RBP23.22■■□□□ 1.31
TTC39C-202ENST00000317571 GREB1LQ9C091 1923 aaPredicted RBP23.21■■□□□ 1.31
TTC39C-202ENST00000317571 N4BP3O15049 544 aa23.21■■□□□ 1.31
TTC39C-202ENST00000317571 GNA11P29992 359 aa23.21■■□□□ 1.31
TTC39C-202ENST00000317571 SHMT1P34896 483 aa23.21■■□□□ 1.31
TTC39C-202ENST00000317571 DMTNQ08495 405 aa23.21■■□□□ 1.31
TTC39C-202ENST00000317571 KCNB1Q14721 858 aa23.21■■□□□ 1.31
TTC39C-202ENST00000317571 TMC4Q7Z404 712 aa23.21■■□□□ 1.31
TTC39C-202ENST00000317571 PPFIBP1Q86W92 1011 aa23.21■■□□□ 1.31
TTC39C-202ENST00000317571 KIFC2Q96AC6 838 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms